[INFO] cloning repository https://github.com/pairwise-alignment/pa-bench
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/pairwise-alignment/pa-bench" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fpairwise-alignment%2Fpa-bench", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fpairwise-alignment%2Fpa-bench'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 8c8faa41336a1fce07995f72b54f6a7908daf629
[INFO] checking pairwise-alignment/pa-bench against master#453ceafce32ef8108c604bca5e165ab41d3d6d8c for pr-124187
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fpairwise-alignment%2Fpa-bench" "/workspace/builds/worker-6-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-6-tc1/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/pairwise-alignment/pa-bench on toolchain 453ceafce32ef8108c604bca5e165ab41d3d6d8c
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+453ceafce32ef8108c604bca5e165ab41d3d6d8c" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/pairwise-alignment/pa-bench
[INFO] finished tweaking git repo https://github.com/pairwise-alignment/pa-bench
[INFO] tweaked toml for git repo https://github.com/pairwise-alignment/pa-bench written to /workspace/builds/worker-6-tc1/source/Cargo.toml
[INFO] crate git repo https://github.com/pairwise-alignment/pa-bench already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+453ceafce32ef8108c604bca5e165ab41d3d6d8c" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Updating git repository `https://github.com/RagnarGrootKoerkamp/astar-pairwise-aligner`
[INFO] [stderr]     Updating git repository `https://github.com/pairwise-alignment/edlib-rs`
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[INFO] [stderr]     Updating git submodule `https://github.com/pairwise-alignment/ksw2.git`
[INFO] [stderr]     Updating git repository `https://github.com/pairwise-alignment/pa-types`
[INFO] [stderr]     Updating git repository `https://github.com/Daniel-Liu-c0deb0t/parasailors-new`
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[INFO] [stderr]     Updating git repository `https://github.com/Daniel-Liu-c0deb0t/triple_accel`
[INFO] [stderr]     Updating git repository `https://github.com/Daniel-Liu-c0deb0t/block-aligner`
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[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]     Updating git repository `https://github.com/andrewprivate/parasail-sys`
[INFO] [stderr]     Blocking waiting for file lock on package cache
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[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:99613afd962a8cfa530ec1899472a458bd015a1ab0af876cf7eb06f6006d81ea" "/opt/rustwide/cargo-home/bin/cargo" "+453ceafce32ef8108c604bca5e165ab41d3d6d8c" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] d7931130ec26f5a210667c7b4a2af0a8fb83c73f98904660f4a8fea1a3964f33
[INFO] running `Command { std: "docker" "start" "-a" "d7931130ec26f5a210667c7b4a2af0a8fb83c73f98904660f4a8fea1a3964f33", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "d7931130ec26f5a210667c7b4a2af0a8fb83c73f98904660f4a8fea1a3964f33", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "d7931130ec26f5a210667c7b4a2af0a8fb83c73f98904660f4a8fea1a3964f33", kill_on_drop: false }`
[INFO] [stdout] d7931130ec26f5a210667c7b4a2af0a8fb83c73f98904660f4a8fea1a3964f33
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:99613afd962a8cfa530ec1899472a458bd015a1ab0af876cf7eb06f6006d81ea" "/opt/rustwide/cargo-home/bin/cargo" "+453ceafce32ef8108c604bca5e165ab41d3d6d8c" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 37b3f726758d84bfd885aa8b85b4deba60285ccd2e3e1df2a4045dade555e18b
[INFO] running `Command { std: "docker" "start" "-a" "37b3f726758d84bfd885aa8b85b4deba60285ccd2e3e1df2a4045dade555e18b", kill_on_drop: false }`
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[INFO] running `Command { std: "docker" "inspect" "37b3f726758d84bfd885aa8b85b4deba60285ccd2e3e1df2a4045dade555e18b", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "37b3f726758d84bfd885aa8b85b4deba60285ccd2e3e1df2a4045dade555e18b", kill_on_drop: false }`
[INFO] [stdout] 37b3f726758d84bfd885aa8b85b4deba60285ccd2e3e1df2a4045dade555e18b
[INFO] checking pairwise-alignment/pa-bench against try#773c42f0166e62a538b8fa36161b0c6df69a9640 for pr-124187
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fpairwise-alignment%2Fpa-bench" "/workspace/builds/worker-6-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-6-tc2/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/pairwise-alignment/pa-bench on toolchain 773c42f0166e62a538b8fa36161b0c6df69a9640
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+773c42f0166e62a538b8fa36161b0c6df69a9640" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/pairwise-alignment/pa-bench
[INFO] finished tweaking git repo https://github.com/pairwise-alignment/pa-bench
[INFO] tweaked toml for git repo https://github.com/pairwise-alignment/pa-bench written to /workspace/builds/worker-6-tc2/source/Cargo.toml
[INFO] crate git repo https://github.com/pairwise-alignment/pa-bench already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+773c42f0166e62a538b8fa36161b0c6df69a9640" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:99613afd962a8cfa530ec1899472a458bd015a1ab0af876cf7eb06f6006d81ea" "/opt/rustwide/cargo-home/bin/cargo" "+773c42f0166e62a538b8fa36161b0c6df69a9640" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 7ed68ea13482eefeb0babd43879437bd625ad16dbdaa37dfb1246761942aa7af
[INFO] running `Command { std: "docker" "start" "-a" "7ed68ea13482eefeb0babd43879437bd625ad16dbdaa37dfb1246761942aa7af", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "7ed68ea13482eefeb0babd43879437bd625ad16dbdaa37dfb1246761942aa7af", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "7ed68ea13482eefeb0babd43879437bd625ad16dbdaa37dfb1246761942aa7af", kill_on_drop: false }`
[INFO] [stdout] 7ed68ea13482eefeb0babd43879437bd625ad16dbdaa37dfb1246761942aa7af
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:99613afd962a8cfa530ec1899472a458bd015a1ab0af876cf7eb06f6006d81ea" "/opt/rustwide/cargo-home/bin/cargo" "+773c42f0166e62a538b8fa36161b0c6df69a9640" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] d95fc004e98a7aa9b1d3ab0fca13e69c1ccbb4dab40f47b65ceeed992b8c85fb
[INFO] running `Command { std: "docker" "start" "-a" "d95fc004e98a7aa9b1d3ab0fca13e69c1ccbb4dab40f47b65ceeed992b8c85fb", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.79
[INFO] [stderr]    Compiling unicode-ident v1.0.12
[INFO] [stderr]    Compiling autocfg v1.1.0
[INFO] [stderr]    Compiling libc v0.2.153
[INFO] [stderr]     Checking cfg-if v1.0.0
[INFO] [stderr]    Compiling libm v0.2.8
[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]    Compiling version_check v0.9.4
[INFO] [stderr]    Compiling typenum v1.17.0
[INFO] [stderr]    Compiling serde v1.0.197
[INFO] [stderr]     Checking bitflags v2.5.0
[INFO] [stderr]    Compiling rustix v0.38.32
[INFO] [stderr]    Compiling glob v0.3.1
[INFO] [stderr]     Checking linux-raw-sys v0.4.13
[INFO] [stderr]    Compiling minimal-lexical v0.2.1
[INFO] [stderr]     Checking ppv-lite86 v0.2.17
[INFO] [stderr]     Checking utf8parse v0.2.1
[INFO] [stderr]    Compiling regex-syntax v0.8.2
[INFO] [stderr]    Compiling either v1.10.0
[INFO] [stderr]     Checking memchr v2.7.1
[INFO] [stderr]    Compiling num-traits v0.2.18
[INFO] [stderr]    Compiling clang-sys v1.7.0
[INFO] [stderr]    Compiling num-bigint v0.4.4
[INFO] [stderr]    Compiling libloading v0.8.3
[INFO] [stderr]     Checking anstyle-parse v0.2.3
[INFO] [stderr]     Checking anstyle v1.0.6
[INFO] [stderr]    Compiling home v0.5.9
[INFO] [stderr]     Checking anstyle-query v1.0.2
[INFO] [stderr]     Checking colorchoice v1.0.0
[INFO] [stderr]    Compiling rustversion v1.0.14
[INFO] [stderr]    Compiling quote v1.0.35
[INFO] [stderr]    Compiling matrixmultiply v0.3.8
[INFO] [stderr]    Compiling num-rational v0.4.1
[INFO] [stderr]     Checking anstream v0.6.13
[INFO] [stderr]    Compiling nom v7.1.3
[INFO] [stderr]    Compiling syn v2.0.53
[INFO] [stderr]    Compiling lazy_static v1.4.0
[INFO] [stderr]     Checking clap_lex v0.7.0
[INFO] [stderr]    Compiling lazycell v1.3.0
[INFO] [stderr]    Compiling shlex v1.3.0
[INFO] [stderr]    Compiling log v0.4.21
[INFO] [stderr]    Compiling heck v0.5.0
[INFO] [stderr]    Compiling rustc-hash v1.1.0
[INFO] [stderr]    Compiling jobserver v0.1.28
[INFO] [stderr]    Compiling paste v1.0.14
[INFO] [stderr]     Checking bytemuck v1.15.0
[INFO] [stderr]     Checking strsim v0.11.0
[INFO] [stderr]    Compiling cc v1.0.90
[INFO] [stderr]     Checking aho-corasick v1.1.3
[INFO] [stderr]     Checking safe_arch v0.7.1
[INFO] [stderr]     Checking itertools v0.10.5
[INFO] [stderr]    Compiling proc-macro-error-attr v1.0.4
[INFO] [stderr]    Compiling heck v0.4.1
[INFO] [stderr]    Compiling thiserror v1.0.58
[INFO] [stderr]     Checking getrandom v0.2.12
[INFO] [stderr]     Checking num-integer v0.1.46
[INFO] [stderr]     Checking num-complex v0.4.5
[INFO] [stderr]     Checking rand_core v0.6.4
[INFO] [stderr]     Checking rand_chacha v0.3.1
[INFO] [stderr]     Checking rawpointer v0.2.1
[INFO] [stderr]    Compiling prettyplease v0.2.16
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]     Checking rand v0.8.5
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]     Checking approx v0.5.1
[INFO] [stderr]    Compiling regex-automata v0.4.6
[INFO] [stderr]     Checking wide v0.7.15
[INFO] [stderr]     Checking terminal_size v0.3.0
[INFO] [stderr]    Compiling cexpr v0.6.0
[INFO] [stderr]    Compiling which v4.4.2
[INFO] [stderr]     Checking clap_builder v4.5.2
[INFO] [stderr]    Compiling generic-array v0.14.7
[INFO] [stderr]    Compiling proc-macro-error v1.0.4
[INFO] [stderr]     Checking equivalent v1.0.1
[INFO] [stderr]     Checking byteorder v1.5.0
[INFO] [stderr]     Checking parse-size v1.0.0
[INFO] [stderr]     Checking itoa v1.0.10
[INFO] [stderr]     Checking hashbrown v0.14.3
[INFO] [stderr]    Compiling feature-probe v0.1.1
[INFO] [stderr]     Checking ryu v1.0.17
[INFO] [stderr]     Checking rand_distr v0.4.3
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling anyhow v1.0.81
[INFO] [stderr]    Compiling bv v0.11.1
[INFO] [stderr]    Compiling bindgen v0.69.4
[INFO] [stderr]     Checking csv-core v0.1.11
[INFO] [stderr]    Compiling itertools v0.12.1
[INFO] [stderr]    Compiling pkg-config v0.3.30
[INFO] [stderr]     Checking smallvec v1.13.2
[INFO] [stderr]     Checking triple_accel v0.4.0
[INFO] [stderr]     Checking indexmap v2.2.5
[INFO] [stderr]     Checking fixedbitset v0.4.2
[INFO] [stderr]     Checking bit-vec v0.6.3
[INFO] [stderr]     Checking fxhash v0.2.1
[INFO] [stderr]     Checking simba v0.6.0
[INFO] [stderr]     Checking bit-set v0.5.3
[INFO] [stderr]     Checking ndarray v0.15.6
[INFO] [stderr]    Compiling cmake v0.1.50
[INFO] [stderr]     Checking itertools-num v0.1.3
[INFO] [stderr]     Checking ordered-float v3.9.2
[INFO] [stderr]     Checking bytecount v0.6.7
[INFO] [stderr]     Checking custom_derive v0.1.7
[INFO] [stderr]     Checking str_indices v0.4.3
[INFO] [stderr]    Compiling regex v1.10.3
[INFO] [stderr]     Checking petgraph v0.6.4
[INFO] [stderr]     Checking subtle v2.5.0
[INFO] [stderr]     Checking ropey v1.6.1
[INFO] [stderr]     Checking crypto-common v0.1.6
[INFO] [stderr]     Checking instant v0.1.12
[INFO] [stderr]    Compiling bindgen v0.63.0
[INFO] [stderr]    Compiling bitflags v1.3.2
[INFO] [stderr]    Compiling peeking_take_while v0.1.2
[INFO] [stderr]    Compiling zstd-sys v2.0.9+zstd.1.5.5
[INFO] [stderr]     Checking block-buffer v0.10.4
[INFO] [stderr]    Compiling ring v0.17.8
[INFO] [stderr]     Checking digest v0.10.7
[INFO] [stderr]     Checking cpufeatures v0.2.12
[INFO] [stderr]    Compiling crossbeam-utils v0.8.19
[INFO] [stderr]    Compiling crc32fast v1.4.0
[INFO] [stderr]    Compiling bzip2-sys v0.1.11+1.0.8
[INFO] [stderr] error: could not compile `syn` (lib)
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/rustup-home/toolchains/773c42f0166e62a538b8fa36161b0c6df69a9640/bin/rustc --crate-name syn --edition=2018 /opt/rustwide/cargo-home/registry/src/index.crates.io-6f17d22bba15001f/syn-1.0.109/src/lib.rs --error-format=json --json=diagnostic-rendered-ansi,artifacts,future-incompat --crate-type lib --emit=dep-info,metadata,link -C embed-bitcode=no --cfg 'feature="clone-impls"' --cfg 'feature="default"' --cfg 'feature="derive"' --cfg 'feature="extra-traits"' --cfg 'feature="full"' --cfg 'feature="parsing"' --cfg 'feature="printing"' --cfg 'feature="proc-macro"' --cfg 'feature="quote"' --cfg 'feature="visit"' --cfg 'feature="visit-mut"' -C metadata=6965e0bb1523159e -C extra-filename=-6965e0bb1523159e --out-dir /opt/rustwide/target/debug/deps -L dependency=/opt/rustwide/target/debug/deps --extern proc_macro2=/opt/rustwide/target/debug/deps/libproc_macro2-c0a7e744780d4271.rmeta --extern quote=/opt/rustwide/target/debug/deps/libquote-cfd72e5a145dea92.rmeta --extern unicode_ident=/opt/rustwide/target/debug/deps/libunicode_ident-7b828347d8713ecd.rmeta --cap-lints allow --cap-lints=forbid` (signal: 9, SIGKILL: kill)
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] running `Command { std: "docker" "inspect" "d95fc004e98a7aa9b1d3ab0fca13e69c1ccbb4dab40f47b65ceeed992b8c85fb", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "d95fc004e98a7aa9b1d3ab0fca13e69c1ccbb4dab40f47b65ceeed992b8c85fb", kill_on_drop: false }`
[INFO] [stdout] d95fc004e98a7aa9b1d3ab0fca13e69c1ccbb4dab40f47b65ceeed992b8c85fb