[INFO] fetching crate molar_gromacs 0.1.0...
[INFO] checking molar_gromacs-0.1.0 against master#c2f2db79ca3024f68d22b45aa22b570775c2c4ad for pr-124157
[INFO] extracting crate molar_gromacs 0.1.0 into /workspace/builds/worker-1-tc1/source
[INFO] validating manifest of crates.io crate molar_gromacs 0.1.0 on toolchain c2f2db79ca3024f68d22b45aa22b570775c2c4ad
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c2f2db79ca3024f68d22b45aa22b570775c2c4ad" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking crates.io crate molar_gromacs 0.1.0
[INFO] finished tweaking crates.io crate molar_gromacs 0.1.0
[INFO] tweaked toml for crates.io crate molar_gromacs 0.1.0 written to /workspace/builds/worker-1-tc1/source/Cargo.toml
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c2f2db79ca3024f68d22b45aa22b570775c2c4ad" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]      Locking 48 packages to latest compatible versions
[INFO] [stderr]       Adding bindgen v0.68.1 (latest: v0.69.4)
[INFO] [stderr]       Adding linux-raw-sys v0.4.13 (latest: v0.6.4)
[INFO] [stderr]       Adding peeking_take_while v0.1.2 (latest: v1.0.0)
[INFO] [stderr]       Adding which v4.4.2 (latest: v6.0.1)
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c2f2db79ca3024f68d22b45aa22b570775c2c4ad" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:99613afd962a8cfa530ec1899472a458bd015a1ab0af876cf7eb06f6006d81ea" "/opt/rustwide/cargo-home/bin/cargo" "+c2f2db79ca3024f68d22b45aa22b570775c2c4ad" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 763e0508ec7538a5190f81374252bcf5f56018fa0a99cbb76f0d52ef1fb3a8ff
[INFO] running `Command { std: "docker" "start" "-a" "763e0508ec7538a5190f81374252bcf5f56018fa0a99cbb76f0d52ef1fb3a8ff", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "763e0508ec7538a5190f81374252bcf5f56018fa0a99cbb76f0d52ef1fb3a8ff", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "763e0508ec7538a5190f81374252bcf5f56018fa0a99cbb76f0d52ef1fb3a8ff", kill_on_drop: false }`
[INFO] [stdout] 763e0508ec7538a5190f81374252bcf5f56018fa0a99cbb76f0d52ef1fb3a8ff
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:99613afd962a8cfa530ec1899472a458bd015a1ab0af876cf7eb06f6006d81ea" "/opt/rustwide/cargo-home/bin/cargo" "+c2f2db79ca3024f68d22b45aa22b570775c2c4ad" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 071a62260fec9564aff56d86b45e46f009d925d674e32398b7f9f8f963f76c57
[INFO] running `Command { std: "docker" "start" "-a" "071a62260fec9564aff56d86b45e46f009d925d674e32398b7f9f8f963f76c57", kill_on_drop: false }`
[INFO] [stderr]    Compiling rustix v0.38.34
[INFO] [stderr]    Compiling libc v0.2.154
[INFO] [stderr]    Compiling prettyplease v0.2.19
[INFO] [stderr]    Compiling bitflags v2.5.0
[INFO] [stderr]    Compiling linux-raw-sys v0.4.13
[INFO] [stderr]    Compiling regex-syntax v0.8.3
[INFO] [stderr]    Compiling memchr v2.7.2
[INFO] [stderr]    Compiling minimal-lexical v0.2.1
[INFO] [stderr]    Compiling home v0.5.9
[INFO] [stderr]    Compiling bindgen v0.68.1
[INFO] [stderr]    Compiling either v1.11.0
[INFO] [stderr]    Compiling shlex v1.3.0
[INFO] [stderr]    Compiling clang-sys v1.7.0
[INFO] [stderr]    Compiling libloading v0.8.3
[INFO] [stderr]    Compiling quote v1.0.36
[INFO] [stderr]    Compiling log v0.4.21
[INFO] [stderr]    Compiling anyhow v1.0.82
[INFO] [stderr]    Compiling syn v2.0.60
[INFO] [stderr]    Compiling nom v7.1.3
[INFO] [stderr]    Compiling regex-automata v0.4.6
[INFO] [stderr]    Compiling which v4.4.2
[INFO] [stderr]    Compiling cexpr v0.6.0
[INFO] [stderr]    Compiling regex v1.10.4
[INFO] [stderr]    Compiling molar_gromacs v0.1.0 (/opt/rustwide/workdir)
[INFO] [stderr] error: failed to run custom build command for `molar_gromacs v0.1.0 (/opt/rustwide/workdir)`
[INFO] [stderr] note: To improve backtraces for build dependencies, set the CARGO_PROFILE_DEV_BUILD_OVERRIDE_DEBUG=true environment variable to enable debug information generation.
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/target/debug/build/molar_gromacs-2487234769521f68/build-script-build` (exit status: 101)
[INFO] [stderr]   --- stdout
[INFO] [stderr]   CMAKE_TOOLCHAIN_FILE_x86_64-unknown-linux-gnu = None
[INFO] [stderr]   CMAKE_TOOLCHAIN_FILE_x86_64_unknown_linux_gnu = None
[INFO] [stderr]   HOST_CMAKE_TOOLCHAIN_FILE = None
[INFO] [stderr]   CMAKE_TOOLCHAIN_FILE = None
[INFO] [stderr]   CMAKE_GENERATOR_x86_64-unknown-linux-gnu = None
[INFO] [stderr]   CMAKE_GENERATOR_x86_64_unknown_linux_gnu = None
[INFO] [stderr]   HOST_CMAKE_GENERATOR = None
[INFO] [stderr]   CMAKE_GENERATOR = None
[INFO] [stderr]   CMAKE_PREFIX_PATH_x86_64-unknown-linux-gnu = None
[INFO] [stderr]   CMAKE_PREFIX_PATH_x86_64_unknown_linux_gnu = None
[INFO] [stderr]   HOST_CMAKE_PREFIX_PATH = None
[INFO] [stderr]   CMAKE_PREFIX_PATH = None
[INFO] [stderr]   CMAKE_x86_64-unknown-linux-gnu = None
[INFO] [stderr]   CMAKE_x86_64_unknown_linux_gnu = None
[INFO] [stderr]   HOST_CMAKE = None
[INFO] [stderr]   CMAKE = None
[INFO] [stderr]   running: cd "/opt/rustwide/target/debug/build/molar_gromacs-f3d608ef87f5ae1c/out/build" && CMAKE_PREFIX_PATH="" "cmake" "/opt/rustwide/workdir/gromacs" "-DCMAKE_INSTALL_PREFIX=/opt/rustwide/target/debug/build/molar_gromacs-f3d608ef87f5ae1c/out" "-DCMAKE_C_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_C_COMPILER=/usr/bin/cc" "-DCMAKE_CXX_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_CXX_COMPILER=/usr/bin/c++" "-DCMAKE_ASM_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_ASM_COMPILER=/usr/bin/cc" "-DCMAKE_BUILD_TYPE=Release"
[INFO] [stderr]   -- The CXX compiler identification is GNU 11.4.0
[INFO] [stderr]   -- The C compiler identification is GNU 11.4.0
[INFO] [stderr]   -- Detecting CXX compiler ABI info
[INFO] [stderr]   -- Detecting CXX compiler ABI info - done
[INFO] [stderr]   -- Check for working CXX compiler: /usr/bin/c++ - skipped
[INFO] [stderr]   -- Detecting CXX compile features
[INFO] [stderr]   -- Detecting CXX compile features - done
[INFO] [stderr]   -- Detecting C compiler ABI info
[INFO] [stderr]   -- Detecting C compiler ABI info - done
[INFO] [stderr]   -- Check for working C compiler: /usr/bin/cc - skipped
[INFO] [stderr]   -- Detecting C compile features
[INFO] [stderr]   -- Detecting C compile features - done
[INFO] [stderr]   -- CPM: adding package GROMACS@ (main to /root/.local/CPM_CACHE/gromacs/848b1139ed897bf14811bbb767baee9440e7b718)
[INFO] [stderr]   -- Configuring incomplete, errors occurred!
[INFO] [stderr]   See also "/opt/rustwide/target/debug/build/molar_gromacs-f3d608ef87f5ae1c/out/build/CMakeFiles/CMakeOutput.log".
[INFO] [stderr] 
[INFO] [stderr]   --- stderr
[INFO] [stderr]   [ 11%] Creating directories for 'gromacs-populate'
[INFO] [stderr]   [ 22%] Performing download step (git clone) for 'gromacs-populate'
[INFO] [stderr]   Cloning into '848b1139ed897bf14811bbb767baee9440e7b718'...
[INFO] [stderr]   fatal: unable to access 'https://gitlab.com/gromacs/gromacs.git/': Could not resolve host: gitlab.com
[INFO] [stderr]   Cloning into '848b1139ed897bf14811bbb767baee9440e7b718'...
[INFO] [stderr]   fatal: unable to access 'https://gitlab.com/gromacs/gromacs.git/': Could not resolve host: gitlab.com
[INFO] [stderr]   Cloning into '848b1139ed897bf14811bbb767baee9440e7b718'...
[INFO] [stderr]   fatal: unable to access 'https://gitlab.com/gromacs/gromacs.git/': Could not resolve host: gitlab.com
[INFO] [stderr]   -- Had to git clone more than once:
[INFO] [stderr]             3 times.
[INFO] [stderr]   CMake Error at /opt/rustwide/target/debug/build/molar_gromacs-f3d608ef87f5ae1c/out/build/_deps/gromacs-subbuild/gromacs-populate-prefix/tmp/gromacs-populate-gitclone.cmake:31 (message):
[INFO] [stderr]     Failed to clone repository: 'https://gitlab.com/gromacs/gromacs.git'
[INFO] [stderr] 
[INFO] [stderr] 
[INFO] [stderr]   gmake[2]: *** [CMakeFiles/gromacs-populate.dir/build.make:102: gromacs-populate-prefix/src/gromacs-populate-stamp/gromacs-populate-download] Error 1
[INFO] [stderr]   gmake[1]: *** [CMakeFiles/Makefile2:83: CMakeFiles/gromacs-populate.dir/all] Error 2
[INFO] [stderr]   gmake: *** [Makefile:91: all] Error 2
[INFO] [stderr] 
[INFO] [stderr]   CMake Error at /usr/share/cmake-3.22/Modules/FetchContent.cmake:1087 (message):
[INFO] [stderr]     Build step for gromacs failed: 2
[INFO] [stderr]   Call Stack (most recent call first):
[INFO] [stderr]     /usr/share/cmake-3.22/Modules/FetchContent.cmake:1216:EVAL:2 (__FetchContent_directPopulate)
[INFO] [stderr]     /usr/share/cmake-3.22/Modules/FetchContent.cmake:1216 (cmake_language)
[INFO] [stderr]     CPM.cmake:967 (FetchContent_Populate)
[INFO] [stderr]     CPM.cmake:773 (cpm_fetch_package)
[INFO] [stderr]     CMakeLists.txt:17 (CPMAddPackage)
[INFO] [stderr] 
[INFO] [stderr] 
[INFO] [stderr]   thread 'main' panicked at /opt/rustwide/cargo-home/registry/src/index.crates.io-6f17d22bba15001f/cmake-0.1.50/src/lib.rs:1098:5:
[INFO] [stderr] 
[INFO] [stderr]   command did not execute successfully, got: exit status: 1
[INFO] [stderr] 
[INFO] [stderr]   build script failed, must exit now
[INFO] [stderr]   stack backtrace:
[INFO] [stderr]      0:     0x56098e5c3255 - std::backtrace_rs::backtrace::libunwind::trace::hf6d84d188eed4942
[INFO] [stderr]                                  at /rustc/c2f2db79ca3024f68d22b45aa22b570775c2c4ad/library/std/src/../../backtrace/src/backtrace/libunwind.rs:105:5
[INFO] [stderr]      1:     0x56098e5c3255 - std::backtrace_rs::backtrace::trace_unsynchronized::hb841ab02b27b2a81
[INFO] [stderr]                                  at /rustc/c2f2db79ca3024f68d22b45aa22b570775c2c4ad/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5
[INFO] [stderr]      2:     0x56098e5c3255 - std::sys_common::backtrace::_print_fmt::h7d09263e980d2dc2
[INFO] [stderr]                                  at /rustc/c2f2db79ca3024f68d22b45aa22b570775c2c4ad/library/std/src/sys_common/backtrace.rs:68:5
[INFO] [stderr]      3:     0x56098e5c3255 - <std::sys_common::backtrace::_print::DisplayBacktrace as core::fmt::Display>::fmt::h8710a3386e66dc13
[INFO] [stderr]                                  at /rustc/c2f2db79ca3024f68d22b45aa22b570775c2c4ad/library/std/src/sys_common/backtrace.rs:44:22
[INFO] [stderr]      4:     0x56098e5ec69b - core::fmt::rt::Argument::fmt::h56356193ea14b69e
[INFO] [stderr]                                  at /rustc/c2f2db79ca3024f68d22b45aa22b570775c2c4ad/library/core/src/fmt/rt.rs:165:63
[INFO] [stderr]      5:     0x56098e5ec69b - core::fmt::write::ha8a35e57fe29df69
[INFO] [stderr]                                  at /rustc/c2f2db79ca3024f68d22b45aa22b570775c2c4ad/library/core/src/fmt/mod.rs:1157:21
[INFO] [stderr]      6:     0x56098e5c01af - std::io::Write::write_fmt::h070417d35cbd0295
[INFO] [stderr]                                  at /rustc/c2f2db79ca3024f68d22b45aa22b570775c2c4ad/library/std/src/io/mod.rs:1832:15
[INFO] [stderr]      7:     0x56098e5c302e - std::sys_common::backtrace::_print::h98c81ef11000e712
[INFO] [stderr]                                  at /rustc/c2f2db79ca3024f68d22b45aa22b570775c2c4ad/library/std/src/sys_common/backtrace.rs:47:5
[INFO] [stderr]      8:     0x56098e5c302e - std::sys_common::backtrace::print::hb4fda26b0eb411fc
[INFO] [stderr]                                  at /rustc/c2f2db79ca3024f68d22b45aa22b570775c2c4ad/library/std/src/sys_common/backtrace.rs:34:9
[INFO] [stderr]      9:     0x56098e5c4509 - std::panicking::default_hook::{{closure}}::h58b999a8a8b72663
[INFO] [stderr]     10:     0x56098e5c424d - std::panicking::default_hook::h9ee81ffa3eaff881
[INFO] [stderr]                                  at /rustc/c2f2db79ca3024f68d22b45aa22b570775c2c4ad/library/std/src/panicking.rs:298:9
[INFO] [stderr]     11:     0x56098e5c49a3 - std::panicking::rust_panic_with_hook::h7cf1f420e89ee254
[INFO] [stderr]                                  at /rustc/c2f2db79ca3024f68d22b45aa22b570775c2c4ad/library/std/src/panicking.rs:795:13
[INFO] [stderr]     12:     0x56098e5c4884 - std::panicking::begin_panic_handler::{{closure}}::h1e92862156407829
[INFO] [stderr]                                  at /rustc/c2f2db79ca3024f68d22b45aa22b570775c2c4ad/library/std/src/panicking.rs:664:13
[INFO] [stderr]     13:     0x56098e5c3719 - std::sys_common::backtrace::__rust_end_short_backtrace::hdb9396439049b139
[INFO] [stderr]                                  at /rustc/c2f2db79ca3024f68d22b45aa22b570775c2c4ad/library/std/src/sys_common/backtrace.rs:171:18
[INFO] [stderr]     14:     0x56098e5c45b7 - rust_begin_unwind
[INFO] [stderr]                                  at /rustc/c2f2db79ca3024f68d22b45aa22b570775c2c4ad/library/std/src/panicking.rs:652:5
[INFO] [stderr]     15:     0x56098dfcf263 - core::panicking::panic_fmt::hb6b8317cb2c3be4c
[INFO] [stderr]                                  at /rustc/c2f2db79ca3024f68d22b45aa22b570775c2c4ad/library/core/src/panicking.rs:72:14
[INFO] [stderr]     16:     0x56098e548679 - cmake::fail::h37eeb473aae88579
[INFO] [stderr]     17:     0x56098e547e38 - cmake::run::h853ae92c1b105829
[INFO] [stderr]     18:     0x56098e543f70 - cmake::Config::build::hd02816830a690796
[INFO] [stderr]     19:     0x56098dfd4549 - build_script_build::main::h9dd2b3a0219a4228
[INFO] [stderr]     20:     0x56098dfd0693 - core::ops::function::FnOnce::call_once::hcb0f2c2183d0a2cf
[INFO] [stderr]     21:     0x56098dfcfcc6 - std::sys_common::backtrace::__rust_begin_short_backtrace::h11b508d061e515e8
[INFO] [stderr]     22:     0x56098dfd0389 - std::rt::lang_start::{{closure}}::ha4bc025644058044
[INFO] [stderr]     23:     0x56098e5bb0b6 - core::ops::function::impls::<impl core::ops::function::FnOnce<A> for &F>::call_once::hed2c947f9885a74b
[INFO] [stderr]                                  at /rustc/c2f2db79ca3024f68d22b45aa22b570775c2c4ad/library/core/src/ops/function.rs:284:13
[INFO] [stderr]     24:     0x56098e5bb0b6 - std::panicking::try::do_call::hb89329b1c9c22cc4
[INFO] [stderr]                                  at /rustc/c2f2db79ca3024f68d22b45aa22b570775c2c4ad/library/std/src/panicking.rs:559:40
[INFO] [stderr]     25:     0x56098e5bb0b6 - std::panicking::try::h32506f612ff970ae
[INFO] [stderr]                                  at /rustc/c2f2db79ca3024f68d22b45aa22b570775c2c4ad/library/std/src/panicking.rs:523:19
[INFO] [stderr]     26:     0x56098e5bb0b6 - std::panic::catch_unwind::hb921c12c6fd21966
[INFO] [stderr]                                  at /rustc/c2f2db79ca3024f68d22b45aa22b570775c2c4ad/library/std/src/panic.rs:149:14
[INFO] [stderr]     27:     0x56098e5bb0b6 - std::rt::lang_start_internal::{{closure}}::h525d7c9c8d9957db
[INFO] [stderr]                                  at /rustc/c2f2db79ca3024f68d22b45aa22b570775c2c4ad/library/std/src/rt.rs:141:48
[INFO] [stderr]     28:     0x56098e5bb0b6 - std::panicking::try::do_call::hc05b1198989502ae
[INFO] [stderr]                                  at /rustc/c2f2db79ca3024f68d22b45aa22b570775c2c4ad/library/std/src/panicking.rs:559:40
[INFO] [stderr]     29:     0x56098e5bb0b6 - std::panicking::try::h4ecd1dd6f6f1e3ba
[INFO] [stderr]                                  at /rustc/c2f2db79ca3024f68d22b45aa22b570775c2c4ad/library/std/src/panicking.rs:523:19
[INFO] [stderr]     30:     0x56098e5bb0b6 - std::panic::catch_unwind::h92b0390d9e8eb6ea
[INFO] [stderr]                                  at /rustc/c2f2db79ca3024f68d22b45aa22b570775c2c4ad/library/std/src/panic.rs:149:14
[INFO] [stderr]     31:     0x56098e5bb0b6 - std::rt::lang_start_internal::he4964f7a9f7ed816
[INFO] [stderr]                                  at /rustc/c2f2db79ca3024f68d22b45aa22b570775c2c4ad/library/std/src/rt.rs:141:20
[INFO] [stderr]     32:     0x56098dfd0367 - std::rt::lang_start::h144c8f2b9b2283a3
[INFO] [stderr]     33:     0x56098dfd56b5 - main
[INFO] [stderr]     34:     0x7f60cc933d90 - <unknown>
[INFO] [stderr]     35:     0x7f60cc933e40 - __libc_start_main
[INFO] [stderr]     36:     0x56098dfcfbb5 - _start
[INFO] [stderr]     37:                0x0 - <unknown>
[INFO] running `Command { std: "docker" "inspect" "071a62260fec9564aff56d86b45e46f009d925d674e32398b7f9f8f963f76c57", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "071a62260fec9564aff56d86b45e46f009d925d674e32398b7f9f8f963f76c57", kill_on_drop: false }`
[INFO] [stdout] 071a62260fec9564aff56d86b45e46f009d925d674e32398b7f9f8f963f76c57
