[INFO] fetching crate noodles 0.59.0...
[INFO] checking noodles-0.59.0 against master#af4a5a13a15fa0c60e06321077ef452f769b42fd for pr-122960-2
[INFO] extracting crate noodles 0.59.0 into /workspace/builds/worker-0-tc1/source
[INFO] validating manifest of crates.io crate noodles 0.59.0 on toolchain af4a5a13a15fa0c60e06321077ef452f769b42fd
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+af4a5a13a15fa0c60e06321077ef452f769b42fd" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking crates.io crate noodles 0.59.0
[INFO] finished tweaking crates.io crate noodles 0.59.0
[INFO] tweaked toml for crates.io crate noodles 0.59.0 written to /workspace/builds/worker-0-tc1/source/Cargo.toml
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+af4a5a13a15fa0c60e06321077ef452f769b42fd" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]      Locking 159 packages
[INFO] [stderr]       Adding base64 v0.21.7 (latest: v0.22.0)
[INFO] [stderr]       Adding bitflags v1.3.2 (latest: v2.5.0)
[INFO] [stderr]       Adding generic-array v0.14.7 (latest: v1.0.0)
[INFO] [stderr]       Adding h2 v0.3.25 (latest: v0.4.3)
[INFO] [stderr]       Adding http v0.2.12 (latest: v1.1.0)
[INFO] [stderr]       Adding http-body v0.4.6 (latest: v1.0.0)
[INFO] [stderr]       Adding hyper v0.14.28 (latest: v1.2.0)
[INFO] [stderr]       Adding hyper-rustls v0.24.2 (latest: v0.27.0)
[INFO] [stderr]       Adding noodles-bam v0.51.0 (latest: v0.58.0)
[INFO] [stderr]       Adding noodles-bcf v0.44.0 (latest: v0.48.0)
[INFO] [stderr]       Adding noodles-bed v0.10.0 (latest: v0.12.0)
[INFO] [stderr]       Adding noodles-bgzf v0.25.0 (latest: v0.28.0)
[INFO] [stderr]       Adding noodles-core v0.12.0 (latest: v0.14.0)
[INFO] [stderr]       Adding noodles-cram v0.50.0 (latest: v0.58.0)
[INFO] [stderr]       Adding noodles-csi v0.28.0 (latest: v0.32.0)
[INFO] [stderr]       Adding noodles-fasta v0.30.0 (latest: v0.35.0)
[INFO] [stderr]       Adding noodles-fastq v0.9.0 (latest: v0.10.0)
[INFO] [stderr]       Adding noodles-gff v0.25.0 (latest: v0.29.0)
[INFO] [stderr]       Adding noodles-gtf v0.21.0 (latest: v0.25.0)
[INFO] [stderr]       Adding noodles-htsget v0.2.0 (latest: v0.4.0)
[INFO] [stderr]       Adding noodles-refget v0.1.0 (latest: v0.3.0)
[INFO] [stderr]       Adding noodles-sam v0.48.0 (latest: v0.55.0)
[INFO] [stderr]       Adding noodles-tabix v0.34.0 (latest: v0.38.0)
[INFO] [stderr]       Adding noodles-vcf v0.47.0 (latest: v0.51.0)
[INFO] [stderr]       Adding object v0.32.2 (latest: v0.34.0)
[INFO] [stderr]       Adding reqwest v0.11.27 (latest: v0.12.2)
[INFO] [stderr]       Adding rustls v0.21.10 (latest: v0.23.4)
[INFO] [stderr]       Adding rustls-pemfile v1.0.4 (latest: v2.1.1)
[INFO] [stderr]       Adding rustls-webpki v0.101.7 (latest: v0.102.2)
[INFO] [stderr]       Adding sync_wrapper v0.1.2 (latest: v1.0.0)
[INFO] [stderr]       Adding system-configuration v0.5.1 (latest: v0.6.0)
[INFO] [stderr]       Adding system-configuration-sys v0.5.0 (latest: v0.6.0)
[INFO] [stderr]       Adding tokio-rustls v0.24.1 (latest: v0.26.0)
[INFO] [stderr]       Adding wasi v0.11.0+wasi-snapshot-preview1 (latest: v0.13.0+wasi-0.2.0)
[INFO] [stderr]       Adding webpki-roots v0.25.4 (latest: v0.26.1)
[INFO] [stderr]       Adding windows-sys v0.48.0 (latest: v0.52.0)
[INFO] [stderr]       Adding windows-targets v0.48.5 (latest: v0.52.4)
[INFO] [stderr]       Adding windows_aarch64_gnullvm v0.48.5 (latest: v0.52.4)
[INFO] [stderr]       Adding windows_aarch64_msvc v0.48.5 (latest: v0.52.4)
[INFO] [stderr]       Adding windows_i686_gnu v0.48.5 (latest: v0.52.4)
[INFO] [stderr]       Adding windows_i686_msvc v0.48.5 (latest: v0.52.4)
[INFO] [stderr]       Adding windows_x86_64_gnu v0.48.5 (latest: v0.52.4)
[INFO] [stderr]       Adding windows_x86_64_gnullvm v0.48.5 (latest: v0.52.4)
[INFO] [stderr]       Adding windows_x86_64_msvc v0.48.5 (latest: v0.52.4)
[INFO] [stderr]       Adding winreg v0.50.0 (latest: v0.52.0)
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+af4a5a13a15fa0c60e06321077ef452f769b42fd" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded noodles-bgzf v0.25.0
[INFO] [stderr]   Downloaded noodles-tabix v0.34.0
[INFO] [stderr]   Downloaded lexical-write-integer v0.8.5
[INFO] [stderr]   Downloaded noodles-core v0.12.0
[INFO] [stderr]   Downloaded noodles-csi v0.28.0
[INFO] [stderr]   Downloaded lexical-core v0.8.5
[INFO] [stderr]   Downloaded xz2 v0.1.7
[INFO] [stderr]   Downloaded md-5 v0.10.6
[INFO] [stderr]   Downloaded noodles-fastq v0.9.0
[INFO] [stderr]   Downloaded noodles-bed v0.10.0
[INFO] [stderr]   Downloaded bzip2 v0.4.4
[INFO] [stderr]   Downloaded noodles-bcf v0.44.0
[INFO] [stderr]   Downloaded async-compression v0.4.6
[INFO] [stderr]   Downloaded noodles-cram v0.50.0
[INFO] [stderr]   Downloaded webpki-roots v0.25.4
[INFO] [stderr]   Downloaded bzip2-sys v0.1.11+1.0.8
[INFO] [stderr]   Downloaded lzma-sys v0.1.20
[INFO] [stderr]   Downloaded lexical-parse-float v0.8.5
[INFO] [stderr]   Downloaded lexical-write-float v0.8.5
[INFO] [stderr]   Downloaded noodles-bam v0.51.0
[INFO] [stderr]   Downloaded lexical-util v0.8.5
[INFO] [stderr]   Downloaded noodles-gtf v0.21.0
[INFO] [stderr]   Downloaded tokio-rustls v0.24.1
[INFO] [stderr]   Downloaded wasm-streams v0.4.0
[INFO] [stderr]   Downloaded lexical-parse-integer v0.8.6
[INFO] [stderr]   Downloaded noodles-sam v0.48.0
[INFO] [stderr]   Downloaded noodles-fasta v0.30.0
[INFO] [stderr]   Downloaded noodles-gff v0.25.0
[INFO] [stderr]   Downloaded noodles-htsget v0.2.0
[INFO] [stderr]   Downloaded hyper-rustls v0.24.2
[INFO] [stderr]   Downloaded noodles-refget v0.1.0
[INFO] [stderr]   Downloaded noodles-vcf v0.47.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+af4a5a13a15fa0c60e06321077ef452f769b42fd" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 1ddb4eb990d0f78b8705a996ab282aced59fa5ea45e66264465972ecd7e291e6
[INFO] running `Command { std: "docker" "start" "-a" "1ddb4eb990d0f78b8705a996ab282aced59fa5ea45e66264465972ecd7e291e6", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "1ddb4eb990d0f78b8705a996ab282aced59fa5ea45e66264465972ecd7e291e6", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "1ddb4eb990d0f78b8705a996ab282aced59fa5ea45e66264465972ecd7e291e6", kill_on_drop: false }`
[INFO] [stdout] 1ddb4eb990d0f78b8705a996ab282aced59fa5ea45e66264465972ecd7e291e6
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+af4a5a13a15fa0c60e06321077ef452f769b42fd" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 8cd53b14c821df4682ad8a09df6742baceef5854ac8b47945f175f252ba50901
[INFO] running `Command { std: "docker" "start" "-a" "8cd53b14c821df4682ad8a09df6742baceef5854ac8b47945f175f252ba50901", kill_on_drop: false }`
[INFO] [stderr]     Checking noodles v0.59.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 0.24s
[INFO] running `Command { std: "docker" "inspect" "8cd53b14c821df4682ad8a09df6742baceef5854ac8b47945f175f252ba50901", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "8cd53b14c821df4682ad8a09df6742baceef5854ac8b47945f175f252ba50901", kill_on_drop: false }`
[INFO] [stdout] 8cd53b14c821df4682ad8a09df6742baceef5854ac8b47945f175f252ba50901
[INFO] checking noodles-0.59.0 against try#36dbcaee1a55543dfc181be52a69d99ff46ff62f for pr-122960-2
[INFO] extracting crate noodles 0.59.0 into /workspace/builds/worker-0-tc2/source
[INFO] validating manifest of crates.io crate noodles 0.59.0 on toolchain 36dbcaee1a55543dfc181be52a69d99ff46ff62f
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+36dbcaee1a55543dfc181be52a69d99ff46ff62f" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking crates.io crate noodles 0.59.0
[INFO] finished tweaking crates.io crate noodles 0.59.0
[INFO] tweaked toml for crates.io crate noodles 0.59.0 written to /workspace/builds/worker-0-tc2/source/Cargo.toml
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+36dbcaee1a55543dfc181be52a69d99ff46ff62f" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Updating crates.io index
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+36dbcaee1a55543dfc181be52a69d99ff46ff62f" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+36dbcaee1a55543dfc181be52a69d99ff46ff62f" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 9acc5de7dbe5a742f4048aeac93b55a32c8176de094706efb343cd3970e80bf6
[INFO] running `Command { std: "docker" "start" "-a" "9acc5de7dbe5a742f4048aeac93b55a32c8176de094706efb343cd3970e80bf6", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "9acc5de7dbe5a742f4048aeac93b55a32c8176de094706efb343cd3970e80bf6", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "9acc5de7dbe5a742f4048aeac93b55a32c8176de094706efb343cd3970e80bf6", kill_on_drop: false }`
[INFO] [stdout] 9acc5de7dbe5a742f4048aeac93b55a32c8176de094706efb343cd3970e80bf6
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+36dbcaee1a55543dfc181be52a69d99ff46ff62f" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 16cb2557200e64bc47220322bcc29163ed371af35878726f962305229c26b105
[INFO] running `Command { std: "docker" "start" "-a" "16cb2557200e64bc47220322bcc29163ed371af35878726f962305229c26b105", kill_on_drop: false }`
[INFO] [stderr] Copying to /tmp/fixit
[INFO] [stderr] Running `cargo fix --edition`
[INFO] [stderr]     Checking noodles v0.59.0 (/tmp/fixit)
[INFO] [stderr]    Migrating src/lib.rs from 2021 edition to 2024
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 0.33s
[INFO] [stderr] Running `cargo check` to verify 2024
[INFO] [stderr]     Checking noodles v0.59.0 (/tmp/fixit)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 0.14s
[INFO] running `Command { std: "docker" "inspect" "16cb2557200e64bc47220322bcc29163ed371af35878726f962305229c26b105", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "16cb2557200e64bc47220322bcc29163ed371af35878726f962305229c26b105", kill_on_drop: false }`
[INFO] [stdout] 16cb2557200e64bc47220322bcc29163ed371af35878726f962305229c26b105