[INFO] cloning repository https://github.com/algbio/flowtigs
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/algbio/flowtigs" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Falgbio%2Fflowtigs", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Falgbio%2Fflowtigs'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] dea86c5b526fd0471425d2799f75ba34fa3f0115
[INFO] checking algbio/flowtigs against master#3139ff09e9d07f7700f8d15ed25a231e29c43627 for pr-121848-3
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Falgbio%2Fflowtigs" "/workspace/builds/worker-2-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-2-tc1/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/algbio/flowtigs on toolchain 3139ff09e9d07f7700f8d15ed25a231e29c43627
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+3139ff09e9d07f7700f8d15ed25a231e29c43627" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/algbio/flowtigs
[INFO] finished tweaking git repo https://github.com/algbio/flowtigs
[INFO] tweaked toml for git repo https://github.com/algbio/flowtigs written to /workspace/builds/worker-2-tc1/source/Cargo.toml
[INFO] crate git repo https://github.com/algbio/flowtigs already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+3139ff09e9d07f7700f8d15ed25a231e29c43627" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded disjoint-sets v0.4.2
[INFO] [stderr]   Downloaded compact-genome v2.1.1
[INFO] [stderr]   Downloaded triple_accel v0.4.0
[INFO] [stderr]   Downloaded genome-graph v8.0.0
[INFO] [stderr]   Downloaded traitsequence v2.0.0
[INFO] [stderr]   Downloaded multimap v0.9.1
[INFO] [stderr]   Downloaded self-meter v0.6.0
[INFO] [stderr]   Downloaded simple_logger v2.3.0
[INFO] [stderr]   Downloaded derive-new v0.5.9
[INFO] [stderr]   Downloaded rustc_version v0.1.7
[INFO] [stderr]   Downloaded bitvector v0.1.5
[INFO] [stderr]   Downloaded traitgraph-algo v8.1.0
[INFO] [stderr]   Downloaded traitgraph v5.0.0
[INFO] [stderr]   Downloaded bigraph v5.0.0
[INFO] [stderr]   Downloaded fs v0.0.5
[INFO] [stderr]   Downloaded clap v4.3.4
[INFO] [stderr]   Downloaded wide v0.7.23
[INFO] [stderr]   Downloaded bio v1.6.0
[INFO] [stderr]   Downloaded bio-types v1.0.1
[INFO] [stderr]   Downloaded editdistancek v1.0.2
[INFO] [stderr]   Downloaded clap_builder v4.3.4
[INFO] [stderr]   Downloaded statrs v0.16.1
[INFO] [stderr]   Downloaded semver v0.1.20
[INFO] [stderr]   Downloaded bytecount v0.6.8
[INFO] [stderr]   Downloaded newtype_derive v0.1.6
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:923055f121b5182466d55868a8b05e67af8ba4a3a3f6bad814e953ca3cd3ac2a" "/opt/rustwide/cargo-home/bin/cargo" "+3139ff09e9d07f7700f8d15ed25a231e29c43627" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] f9f7fc63d7ea39d81b53c44201090d01a00089a6a5dcbc675d3df13f2d1f261d
[INFO] running `Command { std: "docker" "start" "-a" "f9f7fc63d7ea39d81b53c44201090d01a00089a6a5dcbc675d3df13f2d1f261d", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "f9f7fc63d7ea39d81b53c44201090d01a00089a6a5dcbc675d3df13f2d1f261d", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "f9f7fc63d7ea39d81b53c44201090d01a00089a6a5dcbc675d3df13f2d1f261d", kill_on_drop: false }`
[INFO] [stdout] f9f7fc63d7ea39d81b53c44201090d01a00089a6a5dcbc675d3df13f2d1f261d
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:923055f121b5182466d55868a8b05e67af8ba4a3a3f6bad814e953ca3cd3ac2a" "/opt/rustwide/cargo-home/bin/cargo" "+3139ff09e9d07f7700f8d15ed25a231e29c43627" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 9266447b2fdfaee8cdea7e49b32abef9685da39e574f491ba9297dcb8501e5e5
[INFO] running `Command { std: "docker" "start" "-a" "9266447b2fdfaee8cdea7e49b32abef9685da39e574f491ba9297dcb8501e5e5", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.155
[INFO] [stderr]    Compiling proc-macro2 v1.0.85
[INFO] [stderr]    Compiling unicode-ident v1.0.9
[INFO] [stderr]    Compiling autocfg v1.3.0
[INFO] [stderr]    Compiling libm v0.2.8
[INFO] [stderr]     Checking memchr v2.7.2
[INFO] [stderr]     Checking once_cell v1.18.0
[INFO] [stderr]    Compiling serde v1.0.204
[INFO] [stderr]     Checking zerocopy v0.7.34
[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]     Checking allocator-api2 v0.2.18
[INFO] [stderr]    Compiling radium v0.7.0
[INFO] [stderr]     Checking tap v1.0.1
[INFO] [stderr]    Compiling ahash v0.8.11
[INFO] [stderr]    Compiling io-lifetimes v1.0.11
[INFO] [stderr]     Checking bytemuck v1.16.0
[INFO] [stderr]    Compiling paste v1.0.15
[INFO] [stderr]     Checking equivalent v1.0.1
[INFO] [stderr]     Checking wyz v0.5.1
[INFO] [stderr]    Compiling thiserror v1.0.61
[INFO] [stderr]     Checking safe_arch v0.7.1
[INFO] [stderr]     Checking funty v2.0.0
[INFO] [stderr]    Compiling heck v0.4.1
[INFO] [stderr]    Compiling rustversion v1.0.17
[INFO] [stderr]     Checking fixedbitset v0.4.2
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]     Checking rawpointer v0.2.1
[INFO] [stderr]    Compiling num-traits v0.2.19
[INFO] [stderr]    Compiling matrixmultiply v0.3.8
[INFO] [stderr]    Compiling rustix v0.37.20
[INFO] [stderr]    Compiling cc v1.0.98
[INFO] [stderr]    Compiling feature-probe v0.1.1
[INFO] [stderr]     Checking traitsequence v2.0.0
[INFO] [stderr]     Checking hashbrown v0.14.5
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]     Checking aho-corasick v1.1.3
[INFO] [stderr]     Checking wide v0.7.23
[INFO] [stderr]     Checking regex-syntax v0.8.3
[INFO] [stderr]     Checking linux-raw-sys v0.3.8
[INFO] [stderr]    Compiling bv v0.11.1
[INFO] [stderr]     Checking bitvec v1.0.1
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling time-core v0.1.2
[INFO] [stderr]    Compiling quote v1.0.36
[INFO] [stderr]    Compiling ref-cast v1.0.23
[INFO] [stderr]     Checking either v1.12.0
[INFO] [stderr]     Checking gimli v0.29.0
[INFO] [stderr]    Compiling num-conv v0.1.0
[INFO] [stderr]    Compiling syn v2.0.66
[INFO] [stderr]     Checking utf8parse v0.2.1
[INFO] [stderr]    Compiling time-macros v0.2.18
[INFO] [stderr]     Checking itertools v0.11.0
[INFO] [stderr]     Checking anstyle-parse v0.2.0
[INFO] [stderr]     Checking indexmap v2.2.6
[INFO] [stderr]     Checking deranged v0.3.11
[INFO] [stderr]     Checking miniz_oxide v0.7.3
[INFO] [stderr]     Checking csv-core v0.1.11
[INFO] [stderr]     Checking num-integer v0.1.46
[INFO] [stderr]     Checking num-complex v0.4.6
[INFO] [stderr]     Checking approx v0.5.1
[INFO] [stderr]     Checking object v0.35.0
[INFO] [stderr]    Compiling error-chain v0.12.4
[INFO] [stderr]     Checking petgraph v0.6.5
[INFO] [stderr]     Checking getrandom v0.2.15
[INFO] [stderr]     Checking num-rational v0.4.2
[INFO] [stderr]     Checking rand_core v0.6.4
[INFO] [stderr]    Compiling backtrace v0.3.72
[INFO] [stderr]     Checking num_cpus v1.15.0
[INFO] [stderr]     Checking rand_chacha v0.3.1
[INFO] [stderr]     Checking num_threads v0.1.6
[INFO] [stderr]     Checking simba v0.6.0
[INFO] [stderr]     Checking bit-vec v0.6.3
[INFO] [stderr]     Checking colorchoice v1.0.0
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[INFO] [stderr]     Checking rustc-demangle v0.1.24
[INFO] [stderr]     Checking ryu v1.0.18
[INFO] [stderr]     Checking anstyle-query v1.0.0
[INFO] [stderr]     Checking rand v0.8.5
[INFO] [stderr]     Checking bit-set v0.5.3
[INFO] [stderr]     Checking ndarray v0.15.6
[INFO] [stderr]     Checking atty v0.2.14
[INFO] [stderr]     Checking iovec v0.1.4
[INFO] [stderr]     Checking itertools-num v0.1.3
[INFO] [stderr]     Checking regex-automata v0.4.6
[INFO] [stderr]     Checking ordered-float v3.9.2
[INFO] [stderr]     Checking anyhow v1.0.86
[INFO] [stderr]     Checking fxhash v0.2.1
[INFO] [stderr]     Checking strsim v0.10.0
[INFO] [stderr]     Checking strum v0.25.0
[INFO] [stderr]     Checking time v0.3.36
[INFO] [stderr]     Checking custom_derive v0.1.7
[INFO] [stderr]     Checking bytecount v0.6.8
[INFO] [stderr]     Checking editdistancek v1.0.2
[INFO] [stderr]     Checking bitvector v0.1.5
[INFO] [stderr]     Checking triple_accel v0.4.0
[INFO] [stderr]     Checking futures v0.1.31
[INFO] [stderr]     Checking clap_lex v0.5.0
[INFO] [stderr]     Checking bytes v0.4.12
[INFO] [stderr]     Checking colored v2.0.0
[INFO] [stderr]     Checking is-terminal v0.4.7
[INFO] [stderr]     Checking rand_distr v0.4.3
[INFO] [stderr]     Checking quick-error v1.2.3
[INFO] [stderr]     Checking anstream v0.3.2
[INFO] [stderr]     Checking termcolor v1.1.3
[INFO] [stderr]     Checking disjoint-sets v0.4.2
[INFO] [stderr]     Checking addr2line v0.22.0
[INFO] [stderr]     Checking clap_builder v4.3.4
[INFO] [stderr]     Checking traitgraph v5.0.0
[INFO] [stderr]     Checking simple_logger v2.3.0
[INFO] [stderr]     Checking simplelog v0.12.1
[INFO] [stderr]     Checking traitgraph-algo v8.1.0
[INFO] [stderr]     Checking futures-cpupool v0.1.8
[INFO] [stderr]     Checking fs v0.0.5
[INFO] [stderr]    Compiling nalgebra-macros v0.1.0
[INFO] [stderr]    Compiling derive-new v0.5.9
[INFO] [stderr]     Checking bigraph v5.0.0
[INFO] [stderr]     Checking regex v1.10.4
[INFO] [stderr]    Compiling serde_derive v1.0.204
[INFO] [stderr]    Compiling thiserror-impl v1.0.61
[INFO] [stderr]    Compiling enum-map-derive v0.17.0
[INFO] [stderr]    Compiling strum_macros v0.25.3
[INFO] [stderr]    Compiling ref-cast-impl v1.0.23
[INFO] [stderr]    Compiling clap_derive v4.3.2
[INFO] [stderr]     Checking enum-map v2.7.3
[INFO] [stderr]     Checking compact-genome v2.1.1
[INFO] [stderr]     Checking bio-types v1.0.1
[INFO] [stderr]     Checking clap v4.3.4
[INFO] [stderr]     Checking nalgebra v0.29.0
[INFO] [stderr]     Checking csv v1.3.0
[INFO] [stderr]     Checking vec_map v0.8.2
[INFO] [stderr]     Checking multimap v0.9.1
[INFO] [stderr]     Checking self-meter v0.6.0
[INFO] [stderr]     Checking statrs v0.16.1
[INFO] [stderr]     Checking bio v1.6.0
[INFO] [stderr]     Checking genome-graph v8.0.0
[INFO] [stderr]     Checking flowtigs v1.1.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 16.05s
[INFO] running `Command { std: "docker" "inspect" "9266447b2fdfaee8cdea7e49b32abef9685da39e574f491ba9297dcb8501e5e5", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "9266447b2fdfaee8cdea7e49b32abef9685da39e574f491ba9297dcb8501e5e5", kill_on_drop: false }`
[INFO] [stdout] 9266447b2fdfaee8cdea7e49b32abef9685da39e574f491ba9297dcb8501e5e5