[INFO] cloning repository https://github.com/jianshu93/skani-lib
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/jianshu93/skani-lib" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fjianshu93%2Fskani-lib", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fjianshu93%2Fskani-lib'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 947f073d2072a5f09905a9c5b56e6d23308fd6c0
[INFO] checking jianshu93/skani-lib against master#3139ff09e9d07f7700f8d15ed25a231e29c43627 for pr-121848-3
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fjianshu93%2Fskani-lib" "/workspace/builds/worker-4-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-4-tc1/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/jianshu93/skani-lib on toolchain 3139ff09e9d07f7700f8d15ed25a231e29c43627
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+3139ff09e9d07f7700f8d15ed25a231e29c43627" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/jianshu93/skani-lib
[INFO] finished tweaking git repo https://github.com/jianshu93/skani-lib
[INFO] tweaked toml for git repo https://github.com/jianshu93/skani-lib written to /workspace/builds/worker-4-tc1/source/Cargo.toml
[INFO] crate git repo https://github.com/jianshu93/skani-lib already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+3139ff09e9d07f7700f8d15ed25a231e29c43627" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded needletail v0.4.1
[INFO] [stderr]   Downloaded intervallum v1.4.1
[INFO] [stderr]   Downloaded bio-types v1.0.1
[INFO] [stderr]   Downloaded editdistancek v1.0.2
[INFO] [stderr]   Downloaded rust-lapper v1.1.0
[INFO] [stderr]   Downloaded statrs v0.17.1
[INFO] [stderr]   Downloaded gbdt v0.1.3
[INFO] [stderr]   Downloaded statrs v0.16.1
[INFO] [stderr]   Downloaded bio v1.6.0
[INFO] [stderr]   Downloaded skani v0.1.1
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:923055f121b5182466d55868a8b05e67af8ba4a3a3f6bad814e953ca3cd3ac2a" "/opt/rustwide/cargo-home/bin/cargo" "+3139ff09e9d07f7700f8d15ed25a231e29c43627" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] fe969d541dce6b5c2679e7fe04dc6d804870e36315e6c91032e0ac5e1194e7e8
[INFO] running `Command { std: "docker" "start" "-a" "fe969d541dce6b5c2679e7fe04dc6d804870e36315e6c91032e0ac5e1194e7e8", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "fe969d541dce6b5c2679e7fe04dc6d804870e36315e6c91032e0ac5e1194e7e8", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "fe969d541dce6b5c2679e7fe04dc6d804870e36315e6c91032e0ac5e1194e7e8", kill_on_drop: false }`
[INFO] [stdout] fe969d541dce6b5c2679e7fe04dc6d804870e36315e6c91032e0ac5e1194e7e8
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:923055f121b5182466d55868a8b05e67af8ba4a3a3f6bad814e953ca3cd3ac2a" "/opt/rustwide/cargo-home/bin/cargo" "+3139ff09e9d07f7700f8d15ed25a231e29c43627" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 4a6840bf8efeb384169998a59d79dba7cd20efaea1a09062250da17939840219
[INFO] running `Command { std: "docker" "start" "-a" "4a6840bf8efeb384169998a59d79dba7cd20efaea1a09062250da17939840219", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.86
[INFO] [stderr]    Compiling unicode-ident v1.0.12
[INFO] [stderr]    Compiling autocfg v1.3.0
[INFO] [stderr]    Compiling libc v0.2.155
[INFO] [stderr]    Compiling libm v0.2.8
[INFO] [stderr]     Checking cfg-if v1.0.0
[INFO] [stderr]    Compiling serde v1.0.203
[INFO] [stderr]     Checking memchr v2.7.4
[INFO] [stderr]    Compiling cc v1.0.104
[INFO] [stderr]    Compiling paste v1.0.15
[INFO] [stderr]     Checking ppv-lite86 v0.2.17
[INFO] [stderr]    Compiling pkg-config v0.3.30
[INFO] [stderr]    Compiling num-traits v0.2.19
[INFO] [stderr]     Checking bytemuck v1.16.1
[INFO] [stderr]    Compiling matrixmultiply v0.3.8
[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]    Compiling quote v1.0.36
[INFO] [stderr]     Checking safe_arch v0.7.2
[INFO] [stderr]    Compiling typenum v1.17.0
[INFO] [stderr]    Compiling syn v2.0.68
[INFO] [stderr]    Compiling crossbeam-utils v0.8.20
[INFO] [stderr]     Checking getrandom v0.2.15
[INFO] [stderr]     Checking wide v0.7.25
[INFO] [stderr]     Checking rand_core v0.6.4
[INFO] [stderr]     Checking rawpointer v0.2.1
[INFO] [stderr]     Checking rand_chacha v0.3.1
[INFO] [stderr]     Checking rand v0.8.5
[INFO] [stderr]     Checking num-integer v0.1.46
[INFO] [stderr]     Checking num-complex v0.4.6
[INFO] [stderr]     Checking approx v0.5.1
[INFO] [stderr]     Checking num-rational v0.4.2
[INFO] [stderr]     Checking aho-corasick v1.1.3
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]     Checking regex-syntax v0.8.4
[INFO] [stderr]     Checking rand_distr v0.4.3
[INFO] [stderr]    Compiling rustversion v1.0.17
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]     Checking crossbeam-epoch v0.9.18
[INFO] [stderr]    Compiling bzip2-sys v0.1.11+1.0.8
[INFO] [stderr]    Compiling lzma-sys v0.1.20
[INFO] [stderr]     Checking bit-vec v0.6.3
[INFO] [stderr]     Checking either v1.13.0
[INFO] [stderr]    Compiling thiserror v1.0.61
[INFO] [stderr]     Checking itoa v1.0.11
[INFO] [stderr]     Checking lazy_static v1.5.0
[INFO] [stderr]    Compiling feature-probe v0.1.1
[INFO] [stderr]     Checking ryu v1.0.18
[INFO] [stderr]    Compiling rayon-core v1.12.1
[INFO] [stderr]     Checking bit-set v0.5.3
[INFO] [stderr]     Checking crossbeam-deque v0.8.5
[INFO] [stderr]     Checking simba v0.6.0
[INFO] [stderr]    Compiling bv v0.11.1
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling indexmap v1.9.3
[INFO] [stderr]    Compiling heck v0.4.1
[INFO] [stderr]     Checking equivalent v1.0.1
[INFO] [stderr]    Compiling serde_json v1.0.120
[INFO] [stderr]    Compiling anyhow v1.0.86
[INFO] [stderr]     Checking hashbrown v0.14.5
[INFO] [stderr]     Checking utf8parse v0.2.2
[INFO] [stderr]     Checking adler v1.0.2
[INFO] [stderr]     Checking anstyle-parse v0.2.4
[INFO] [stderr]     Checking miniz_oxide v0.7.4
[INFO] [stderr]     Checking indexmap v2.2.6
[INFO] [stderr]     Checking regex-automata v0.4.7
[INFO] [stderr]     Checking simba v0.8.1
[INFO] [stderr]     Checking csv-core v0.1.11
[INFO] [stderr]     Checking crc32fast v1.4.2
[INFO] [stderr]     Checking bytecount v0.6.8
[INFO] [stderr]     Checking anstyle v1.0.7
[INFO] [stderr]     Checking safemem v0.3.3
[INFO] [stderr]     Checking byteorder v1.5.0
[INFO] [stderr]     Checking fixedbitset v0.4.2
[INFO] [stderr]     Checking os_str_bytes v6.6.1
[INFO] [stderr]     Checking trilean v1.1.0
[INFO] [stderr]     Checking is_terminal_polyfill v1.70.0
[INFO] [stderr]     Checking hashbrown v0.12.3
[INFO] [stderr]     Checking anstyle-query v1.1.0
[INFO] [stderr]     Checking colorchoice v1.0.1
[INFO] [stderr]     Checking anstream v0.6.14
[INFO] [stderr]     Checking clap_lex v0.2.4
[INFO] [stderr]     Checking gcollections v1.5.0
[INFO] [stderr]    Compiling nalgebra-macros v0.1.0
[INFO] [stderr]    Compiling derive-new v0.5.9
[INFO] [stderr]     Checking fxhash v0.2.1
[INFO] [stderr]     Checking petgraph v0.6.5
[INFO] [stderr]     Checking buf_redux v0.8.4
[INFO] [stderr]    Compiling serde_derive v1.0.203
[INFO] [stderr]    Compiling thiserror-impl v1.0.61
[INFO] [stderr]     Checking regex v1.10.5
[INFO] [stderr]    Compiling strum_macros v0.25.3
[INFO] [stderr]    Compiling enum-map-derive v0.17.0
[INFO] [stderr]    Compiling nalgebra-macros v0.2.2
[INFO] [stderr]     Checking enum-map v2.7.3
[INFO] [stderr]     Checking flate2 v1.0.30
[INFO] [stderr]     Checking xz2 v0.1.7
[INFO] [stderr]     Checking rayon v1.10.0
[INFO] [stderr]     Checking bio-types v1.0.1
[INFO] [stderr]     Checking itertools v0.11.0
[INFO] [stderr]     Checking bzip2 v0.4.4
[INFO] [stderr]     Checking nalgebra v0.29.0
[INFO] [stderr]     Checking ndarray v0.15.6
[INFO] [stderr]     Checking ordered-float v3.9.2
[INFO] [stderr]     Checking itertools-num v0.1.3
[INFO] [stderr]     Checking thread-id v3.3.0
[INFO] [stderr]     Checking atty v0.2.14
[INFO] [stderr]     Checking bitflags v1.3.2
[INFO] [stderr]     Checking custom_derive v0.1.7
[INFO] [stderr]     Checking bit-vec v0.5.1
[INFO] [stderr]     Checking editdistancek v1.0.2
[INFO] [stderr]     Checking log v0.4.22
[INFO] [stderr]     Checking strum v0.25.0
[INFO] [stderr]     Checking clap_lex v0.7.1
[INFO] [stderr]     Checking strsim v0.11.1
[INFO] [stderr]     Checking textwrap v0.16.1
[INFO] [stderr]     Checking triple_accel v0.4.0
[INFO] [stderr]     Checking termcolor v1.4.1
[INFO] [stderr]     Checking strsim v0.10.0
[INFO] [stderr]     Checking clap_builder v4.5.8
[INFO] [stderr]     Checking clap v3.2.25
[INFO] [stderr]     Checking nalgebra v0.32.6
[INFO] [stderr]     Checking partitions v0.2.4
[INFO] [stderr]     Checking simple-logging v2.0.2
[INFO] [stderr]     Checking needletail v0.4.1
[INFO] [stderr]     Checking intervallum v1.4.1
[INFO] [stderr]     Checking rust-lapper v1.1.0
[INFO] [stderr]     Checking fastrand v1.9.0
[INFO] [stderr]     Checking clap v4.5.8
[INFO] [stderr]     Checking multimap v0.9.1
[INFO] [stderr]     Checking csv v1.3.0
[INFO] [stderr]     Checking vec_map v0.8.2
[INFO] [stderr]     Checking bincode v1.3.3
[INFO] [stderr]     Checking smallvec v1.13.2
[INFO] [stderr]     Checking gbdt v0.1.3
[INFO] [stderr]     Checking statrs v0.16.1
[INFO] [stderr]     Checking statrs v0.17.1
[INFO] [stderr]     Checking bio v1.6.0
[INFO] [stderr]     Checking skani v0.1.1
[INFO] [stderr]     Checking skani-lib-test v0.1.0 (/opt/rustwide/workdir)
[INFO] [stdout] warning: unused import: `ArgAction`
[INFO] [stdout]  --> src/main.rs:1:21
[INFO] [stdout]   |
[INFO] [stdout] 1 | use clap::{Command, ArgAction, Arg};
[INFO] [stdout]   |                     ^^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `ArgAction`
[INFO] [stdout]  --> src/main.rs:1:21
[INFO] [stdout]   |
[INFO] [stdout] 1 | use clap::{Command, ArgAction, Arg};
[INFO] [stdout]   |                     ^^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 1 warning emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 1 warning emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `dev` profile [optimized + debuginfo] target(s) in 18.00s
[INFO] [stderr] warning: the following packages contain code that will be rejected by a future version of Rust: buf_redux v0.8.4, partitions v0.2.4
[INFO] [stderr] note: to see what the problems were, use the option `--future-incompat-report`, or run `cargo report future-incompatibilities --id 1`
[INFO] running `Command { std: "docker" "inspect" "4a6840bf8efeb384169998a59d79dba7cd20efaea1a09062250da17939840219", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "4a6840bf8efeb384169998a59d79dba7cd20efaea1a09062250da17939840219", kill_on_drop: false }`
[INFO] [stdout] 4a6840bf8efeb384169998a59d79dba7cd20efaea1a09062250da17939840219
