[INFO] fetching crate molar_gromacs 0.1.0...
[INFO] checking molar_gromacs-0.1.0 against master#30f74ff0dc4d66debc8b50724c446f817e5f75f4 for pr-121848-1
[INFO] extracting crate molar_gromacs 0.1.0 into /workspace/builds/worker-2-tc1/source
[INFO] validating manifest of crates.io crate molar_gromacs 0.1.0 on toolchain 30f74ff0dc4d66debc8b50724c446f817e5f75f4
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+30f74ff0dc4d66debc8b50724c446f817e5f75f4" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking crates.io crate molar_gromacs 0.1.0
[INFO] finished tweaking crates.io crate molar_gromacs 0.1.0
[INFO] tweaked toml for crates.io crate molar_gromacs 0.1.0 written to /workspace/builds/worker-2-tc1/source/Cargo.toml
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+30f74ff0dc4d66debc8b50724c446f817e5f75f4" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+30f74ff0dc4d66debc8b50724c446f817e5f75f4" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+30f74ff0dc4d66debc8b50724c446f817e5f75f4" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] b191a2fa4ede52831cce87ab63bc62359bdfc96608b8967df9c480b1f62e9fea
[INFO] running `Command { std: "docker" "start" "-a" "b191a2fa4ede52831cce87ab63bc62359bdfc96608b8967df9c480b1f62e9fea", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "b191a2fa4ede52831cce87ab63bc62359bdfc96608b8967df9c480b1f62e9fea", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "b191a2fa4ede52831cce87ab63bc62359bdfc96608b8967df9c480b1f62e9fea", kill_on_drop: false }`
[INFO] [stdout] b191a2fa4ede52831cce87ab63bc62359bdfc96608b8967df9c480b1f62e9fea
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+30f74ff0dc4d66debc8b50724c446f817e5f75f4" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 75e2cba7bc2382dd09b93f8a26e265a6c23dcbfe5a8aef174ca64cbdfbbdf4de
[INFO] running `Command { std: "docker" "start" "-a" "75e2cba7bc2382dd09b93f8a26e265a6c23dcbfe5a8aef174ca64cbdfbbdf4de", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.79
[INFO] [stderr]    Compiling glob v0.3.1
[INFO] [stderr]    Compiling prettyplease v0.2.17
[INFO] [stderr]    Compiling rustix v0.38.32
[INFO] [stderr]    Compiling linux-raw-sys v0.4.13
[INFO] [stderr]    Compiling libc v0.2.153
[INFO] [stderr]    Compiling minimal-lexical v0.2.1
[INFO] [stderr]    Compiling bitflags v2.5.0
[INFO] [stderr]    Compiling cfg-if v1.0.0
[INFO] [stderr]    Compiling regex-syntax v0.8.3
[INFO] [stderr]    Compiling libloading v0.8.3
[INFO] [stderr]    Compiling nom v7.1.3
[INFO] [stderr]    Compiling either v1.10.0
[INFO] [stderr]    Compiling clang-sys v1.7.0
[INFO] [stderr]    Compiling home v0.5.9
[INFO] [stderr]    Compiling bindgen v0.68.1
[INFO] [stderr]    Compiling log v0.4.21
[INFO] [stderr]    Compiling rustc-hash v1.1.0
[INFO] [stderr]    Compiling quote v1.0.35
[INFO] [stderr]    Compiling shlex v1.3.0
[INFO] [stderr]    Compiling peeking_take_while v0.1.2
[INFO] [stderr]    Compiling lazycell v1.3.0
[INFO] [stderr]    Compiling syn v2.0.57
[INFO] [stderr]    Compiling cmake v0.1.50
[INFO] [stderr]     Checking ascii v1.1.0
[INFO] [stderr]    Compiling regex-automata v0.4.6
[INFO] [stderr]    Compiling which v4.4.2
[INFO] [stderr]    Compiling cexpr v0.6.0
[INFO] [stderr]    Compiling regex v1.10.4
[INFO] [stderr]    Compiling molar_gromacs v0.1.0 (/opt/rustwide/workdir)
[INFO] [stderr] The following warnings were emitted during compilation:
[INFO] [stderr] 
[INFO] [stderr] warning: molar_gromacs@0.1.0: Compiler version doesn't include clang or GCC: "cc" "--version"
[INFO] [stderr] warning: molar_gromacs@0.1.0: Compiler version doesn't include clang or GCC: "c++" "--version"
[INFO] [stderr] 
[INFO] [stderr] error: failed to run custom build command for `molar_gromacs v0.1.0 (/opt/rustwide/workdir)`
[INFO] [stderr] note: To improve backtraces for build dependencies, set the CARGO_PROFILE_DEV_BUILD_OVERRIDE_DEBUG=true environment variable to enable debug information generation.
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/target/debug/build/molar_gromacs-94250cd8fec53e28/build-script-build` (exit status: 101)
[INFO] [stderr]   --- stdout
[INFO] [stderr]   CMAKE_TOOLCHAIN_FILE_x86_64-unknown-linux-gnu = None
[INFO] [stderr]   CMAKE_TOOLCHAIN_FILE_x86_64_unknown_linux_gnu = None
[INFO] [stderr]   HOST_CMAKE_TOOLCHAIN_FILE = None
[INFO] [stderr]   CMAKE_TOOLCHAIN_FILE = None
[INFO] [stderr]   CMAKE_GENERATOR_x86_64-unknown-linux-gnu = None
[INFO] [stderr]   CMAKE_GENERATOR_x86_64_unknown_linux_gnu = None
[INFO] [stderr]   HOST_CMAKE_GENERATOR = None
[INFO] [stderr]   CMAKE_GENERATOR = None
[INFO] [stderr]   cargo:warning=Compiler version doesn't include clang or GCC: "cc" "--version"
[INFO] [stderr]   cargo:warning=Compiler version doesn't include clang or GCC: "c++" "--version"
[INFO] [stderr]   CMAKE_PREFIX_PATH_x86_64-unknown-linux-gnu = None
[INFO] [stderr]   CMAKE_PREFIX_PATH_x86_64_unknown_linux_gnu = None
[INFO] [stderr]   HOST_CMAKE_PREFIX_PATH = None
[INFO] [stderr]   CMAKE_PREFIX_PATH = None
[INFO] [stderr]   CMAKE_x86_64-unknown-linux-gnu = None
[INFO] [stderr]   CMAKE_x86_64_unknown_linux_gnu = None
[INFO] [stderr]   HOST_CMAKE = None
[INFO] [stderr]   CMAKE = None
[INFO] [stderr]   running: cd "/opt/rustwide/target/debug/build/molar_gromacs-7ea46d90cac71e8f/out/build" && CMAKE_PREFIX_PATH="" "cmake" "/opt/rustwide/workdir/gromacs" "-DCMAKE_INSTALL_PREFIX=/opt/rustwide/target/debug/build/molar_gromacs-7ea46d90cac71e8f/out" "-DCMAKE_C_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_C_COMPILER=/usr/bin/cc" "-DCMAKE_CXX_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_CXX_COMPILER=/usr/bin/c++" "-DCMAKE_ASM_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_ASM_COMPILER=/usr/bin/cc" "-DCMAKE_BUILD_TYPE=Release"
[INFO] [stderr]   -- The CXX compiler identification is GNU 11.4.0
[INFO] [stderr]   -- The C compiler identification is GNU 11.4.0
[INFO] [stderr]   -- Detecting CXX compiler ABI info
[INFO] [stderr]   -- Detecting CXX compiler ABI info - done
[INFO] [stderr]   -- Check for working CXX compiler: /usr/bin/c++ - skipped
[INFO] [stderr]   -- Detecting CXX compile features
[INFO] [stderr]   -- Detecting CXX compile features - done
[INFO] [stderr]   -- Detecting C compiler ABI info
[INFO] [stderr]   -- Detecting C compiler ABI info - done
[INFO] [stderr]   -- Check for working C compiler: /usr/bin/cc - skipped
[INFO] [stderr]   -- Detecting C compile features
[INFO] [stderr]   -- Detecting C compile features - done
[INFO] [stderr]   -- CPM: adding package GROMACS@ (main to /root/.local/CPM_CACHE/gromacs/848b1139ed897bf14811bbb767baee9440e7b718)
[INFO] [stderr]   -- Configuring incomplete, errors occurred!
[INFO] [stderr]   See also "/opt/rustwide/target/debug/build/molar_gromacs-7ea46d90cac71e8f/out/build/CMakeFiles/CMakeOutput.log".
[INFO] [stderr] 
[INFO] [stderr]   --- stderr
[INFO] [stderr]   [ 11%] Creating directories for 'gromacs-populate'
[INFO] [stderr]   [ 22%] Performing download step (git clone) for 'gromacs-populate'
[INFO] [stderr]   Cloning into '848b1139ed897bf14811bbb767baee9440e7b718'...
[INFO] [stderr]   fatal: unable to access 'https://gitlab.com/gromacs/gromacs.git/': Could not resolve host: gitlab.com
[INFO] [stderr]   Cloning into '848b1139ed897bf14811bbb767baee9440e7b718'...
[INFO] [stderr]   fatal: unable to access 'https://gitlab.com/gromacs/gromacs.git/': Could not resolve host: gitlab.com
[INFO] [stderr]   Cloning into '848b1139ed897bf14811bbb767baee9440e7b718'...
[INFO] [stderr]   fatal: unable to access 'https://gitlab.com/gromacs/gromacs.git/': Could not resolve host: gitlab.com
[INFO] [stderr]   -- Had to git clone more than once:
[INFO] [stderr]             3 times.
[INFO] [stderr]   CMake Error at /opt/rustwide/target/debug/build/molar_gromacs-7ea46d90cac71e8f/out/build/_deps/gromacs-subbuild/gromacs-populate-prefix/tmp/gromacs-populate-gitclone.cmake:31 (message):
[INFO] [stderr]     Failed to clone repository: 'https://gitlab.com/gromacs/gromacs.git'
[INFO] [stderr] 
[INFO] [stderr] 
[INFO] [stderr]   gmake[2]: *** [CMakeFiles/gromacs-populate.dir/build.make:102: gromacs-populate-prefix/src/gromacs-populate-stamp/gromacs-populate-download] Error 1
[INFO] [stderr]   gmake[1]: *** [CMakeFiles/Makefile2:83: CMakeFiles/gromacs-populate.dir/all] Error 2
[INFO] [stderr]   gmake: *** [Makefile:91: all] Error 2
[INFO] [stderr] 
[INFO] [stderr]   CMake Error at /usr/share/cmake-3.22/Modules/FetchContent.cmake:1087 (message):
[INFO] [stderr]     Build step for gromacs failed: 2
[INFO] [stderr]   Call Stack (most recent call first):
[INFO] [stderr]     /usr/share/cmake-3.22/Modules/FetchContent.cmake:1216:EVAL:2 (__FetchContent_directPopulate)
[INFO] [stderr]     /usr/share/cmake-3.22/Modules/FetchContent.cmake:1216 (cmake_language)
[INFO] [stderr]     CPM.cmake:967 (FetchContent_Populate)
[INFO] [stderr]     CPM.cmake:773 (cpm_fetch_package)
[INFO] [stderr]     CMakeLists.txt:17 (CPMAddPackage)
[INFO] [stderr] 
[INFO] [stderr] 
[INFO] [stderr]   thread 'main' panicked at /opt/rustwide/cargo-home/registry/src/index.crates.io-6f17d22bba15001f/cmake-0.1.50/src/lib.rs:1098:5:
[INFO] [stderr] 
[INFO] [stderr]   command did not execute successfully, got: exit status: 1
[INFO] [stderr] 
[INFO] [stderr]   build script failed, must exit now
[INFO] [stderr]   stack backtrace:
[INFO] [stderr]      0:     0x55d499084272 - std::backtrace_rs::backtrace::libunwind::trace::hd67e08e71d64f12a
[INFO] [stderr]                                  at /rustc/30f74ff0dc4d66debc8b50724c446f817e5f75f4/library/std/src/../../backtrace/src/backtrace/libunwind.rs:105:5
[INFO] [stderr]      1:     0x55d499084272 - std::backtrace_rs::backtrace::trace_unsynchronized::h1b6e03ae921b7ccc
[INFO] [stderr]                                  at /rustc/30f74ff0dc4d66debc8b50724c446f817e5f75f4/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5
[INFO] [stderr]      2:     0x55d499084272 - std::sys_common::backtrace::_print_fmt::h104284235ec6c37d
[INFO] [stderr]                                  at /rustc/30f74ff0dc4d66debc8b50724c446f817e5f75f4/library/std/src/sys_common/backtrace.rs:68:5
[INFO] [stderr]      3:     0x55d499084272 - <std::sys_common::backtrace::_print::DisplayBacktrace as core::fmt::Display>::fmt::h9ec11fc9f8e1e9e3
[INFO] [stderr]                                  at /rustc/30f74ff0dc4d66debc8b50724c446f817e5f75f4/library/std/src/sys_common/backtrace.rs:44:22
[INFO] [stderr]      4:     0x55d4990aeaec - core::fmt::rt::Argument::fmt::hba6bb69d73dbc69a
[INFO] [stderr]                                  at /rustc/30f74ff0dc4d66debc8b50724c446f817e5f75f4/library/core/src/fmt/rt.rs:142:9
[INFO] [stderr]      5:     0x55d4990aeaec - core::fmt::write::h1591db653c658e71
[INFO] [stderr]                                  at /rustc/30f74ff0dc4d66debc8b50724c446f817e5f75f4/library/core/src/fmt/mod.rs:1153:17
[INFO] [stderr]      6:     0x55d49908125f - std::io::Write::write_fmt::hfbffa468e7623aef
[INFO] [stderr]                                  at /rustc/30f74ff0dc4d66debc8b50724c446f817e5f75f4/library/std/src/io/mod.rs:1843:15
[INFO] [stderr]      7:     0x55d499084044 - std::sys_common::backtrace::_print::h00abfdf27a732373
[INFO] [stderr]                                  at /rustc/30f74ff0dc4d66debc8b50724c446f817e5f75f4/library/std/src/sys_common/backtrace.rs:47:5
[INFO] [stderr]      8:     0x55d499084044 - std::sys_common::backtrace::print::ha9520edf621a95dc
[INFO] [stderr]                                  at /rustc/30f74ff0dc4d66debc8b50724c446f817e5f75f4/library/std/src/sys_common/backtrace.rs:34:9
[INFO] [stderr]      9:     0x55d49908587b - std::panicking::default_hook::{{closure}}::h46e508c07ecf0cb0
[INFO] [stderr]     10:     0x55d4990855d3 - std::panicking::default_hook::h171667a6e5f66517
[INFO] [stderr]                                  at /rustc/30f74ff0dc4d66debc8b50724c446f817e5f75f4/library/std/src/panicking.rs:292:9
[INFO] [stderr]     11:     0x55d499085d1d - std::panicking::rust_panic_with_hook::hb748cf56d2d9af62
[INFO] [stderr]                                  at /rustc/30f74ff0dc4d66debc8b50724c446f817e5f75f4/library/std/src/panicking.rs:779:13
[INFO] [stderr]     12:     0x55d499085bf2 - std::panicking::begin_panic_handler::{{closure}}::h1f68a14808274394
[INFO] [stderr]                                  at /rustc/30f74ff0dc4d66debc8b50724c446f817e5f75f4/library/std/src/panicking.rs:657:13
[INFO] [stderr]     13:     0x55d499084746 - std::sys_common::backtrace::__rust_end_short_backtrace::h36413da1fefb6b73
[INFO] [stderr]                                  at /rustc/30f74ff0dc4d66debc8b50724c446f817e5f75f4/library/std/src/sys_common/backtrace.rs:171:18
[INFO] [stderr]     14:     0x55d499085924 - rust_begin_unwind
[INFO] [stderr]                                  at /rustc/30f74ff0dc4d66debc8b50724c446f817e5f75f4/library/std/src/panicking.rs:645:5
[INFO] [stderr]     15:     0x55d498a852d5 - core::panicking::panic_fmt::hbebe585df2478a90
[INFO] [stderr]                                  at /rustc/30f74ff0dc4d66debc8b50724c446f817e5f75f4/library/core/src/panicking.rs:72:14
[INFO] [stderr]     16:     0x55d49900d2d1 - cmake::fail::h51ef41dfe64f7a43
[INFO] [stderr]     17:     0x55d49900ca66 - cmake::run::h0594592f755b910e
[INFO] [stderr]     18:     0x55d499008af8 - cmake::Config::build::hed976333cb60101c
[INFO] [stderr]     19:     0x55d498a8a4b9 - build_script_build::main::h5eead9ebf6d987b3
[INFO] [stderr]     20:     0x55d498a86653 - core::ops::function::FnOnce::call_once::hb28bda4a13719d94
[INFO] [stderr]     21:     0x55d498a85b36 - std::sys_common::backtrace::__rust_begin_short_backtrace::h05142235a1b82402
[INFO] [stderr]     22:     0x55d498a86279 - std::rt::lang_start::{{closure}}::hf723e6b629791aa5
[INFO] [stderr]     23:     0x55d49907c3f3 - core::ops::function::impls::<impl core::ops::function::FnOnce<A> for &F>::call_once::hc0dea7e08dfe9d58
[INFO] [stderr]                                  at /rustc/30f74ff0dc4d66debc8b50724c446f817e5f75f4/library/core/src/ops/function.rs:284:13
[INFO] [stderr]     24:     0x55d49907c3f3 - std::panicking::try::do_call::h9e7e3ff0019eca48
[INFO] [stderr]                                  at /rustc/30f74ff0dc4d66debc8b50724c446f817e5f75f4/library/std/src/panicking.rs:552:40
[INFO] [stderr]     25:     0x55d49907c3f3 - std::panicking::try::h4177c8693e12080e
[INFO] [stderr]                                  at /rustc/30f74ff0dc4d66debc8b50724c446f817e5f75f4/library/std/src/panicking.rs:516:19
[INFO] [stderr]     26:     0x55d49907c3f3 - std::panic::catch_unwind::h30c59f0ccf8c5da4
[INFO] [stderr]                                  at /rustc/30f74ff0dc4d66debc8b50724c446f817e5f75f4/library/std/src/panic.rs:146:14
[INFO] [stderr]     27:     0x55d49907c3f3 - std::rt::lang_start_internal::{{closure}}::hc959f2313e587664
[INFO] [stderr]                                  at /rustc/30f74ff0dc4d66debc8b50724c446f817e5f75f4/library/std/src/rt.rs:148:48
[INFO] [stderr]     28:     0x55d49907c3f3 - std::panicking::try::do_call::h52365037f05374a7
[INFO] [stderr]                                  at /rustc/30f74ff0dc4d66debc8b50724c446f817e5f75f4/library/std/src/panicking.rs:552:40
[INFO] [stderr]     29:     0x55d49907c3f3 - std::panicking::try::h7da172df60cd6061
[INFO] [stderr]                                  at /rustc/30f74ff0dc4d66debc8b50724c446f817e5f75f4/library/std/src/panicking.rs:516:19
[INFO] [stderr]     30:     0x55d49907c3f3 - std::panic::catch_unwind::h88fa8b63d34be7de
[INFO] [stderr]                                  at /rustc/30f74ff0dc4d66debc8b50724c446f817e5f75f4/library/std/src/panic.rs:146:14
[INFO] [stderr]     31:     0x55d49907c3f3 - std::rt::lang_start_internal::hc3039611687c4867
[INFO] [stderr]                                  at /rustc/30f74ff0dc4d66debc8b50724c446f817e5f75f4/library/std/src/rt.rs:148:20
[INFO] [stderr]     32:     0x55d498a86257 - std::rt::lang_start::haccb4446edae8013
[INFO] [stderr]     33:     0x55d498a8b6a5 - main
[INFO] [stderr]     34:     0x7f3564f11d90 - <unknown>
[INFO] [stderr]     35:     0x7f3564f11e40 - __libc_start_main
[INFO] [stderr]     36:     0x55d498a85a65 - _start
[INFO] [stderr]     37:                0x0 - <unknown>
[INFO] running `Command { std: "docker" "inspect" "75e2cba7bc2382dd09b93f8a26e265a6c23dcbfe5a8aef174ca64cbdfbbdf4de", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "75e2cba7bc2382dd09b93f8a26e265a6c23dcbfe5a8aef174ca64cbdfbbdf4de", kill_on_drop: false }`
[INFO] [stdout] 75e2cba7bc2382dd09b93f8a26e265a6c23dcbfe5a8aef174ca64cbdfbbdf4de
