[INFO] fetching crate exon-gff 0.5.3...
[INFO] checking exon-gff-0.5.3 against master#30f74ff0dc4d66debc8b50724c446f817e5f75f4 for pr-121848-1
[INFO] extracting crate exon-gff 0.5.3 into /workspace/builds/worker-1-tc1/source
[INFO] validating manifest of crates.io crate exon-gff 0.5.3 on toolchain 30f74ff0dc4d66debc8b50724c446f817e5f75f4
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+30f74ff0dc4d66debc8b50724c446f817e5f75f4" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking crates.io crate exon-gff 0.5.3
[INFO] finished tweaking crates.io crate exon-gff 0.5.3
[INFO] tweaked toml for crates.io crate exon-gff 0.5.3 written to /workspace/builds/worker-1-tc1/source/Cargo.toml
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+30f74ff0dc4d66debc8b50724c446f817e5f75f4" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+30f74ff0dc4d66debc8b50724c446f817e5f75f4" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded noodles-csi v0.28.0
[INFO] [stderr]   Downloaded noodles-bgzf v0.25.0
[INFO] [stderr]   Downloaded exon-common v0.5.5
[INFO] [stderr]   Downloaded noodles v0.59.0
[INFO] [stderr]   Downloaded noodles-core v0.12.0
[INFO] [stderr]   Downloaded noodles-gff v0.25.0
[INFO] [stderr]   Downloaded sqlparser_derive v0.2.2
[INFO] [stderr]   Downloaded arrow-string v49.0.0
[INFO] [stderr]   Downloaded arrow-schema v49.0.0
[INFO] [stderr]   Downloaded datafusion-execution v34.0.0
[INFO] [stderr]   Downloaded arrow-row v49.0.0
[INFO] [stderr]   Downloaded arrow-arith v49.0.0
[INFO] [stderr]   Downloaded arrow-csv v49.0.0
[INFO] [stderr]   Downloaded arrow-cast v49.0.0
[INFO] [stderr]   Downloaded arrow v49.0.0
[INFO] [stderr]   Downloaded datafusion-optimizer v34.0.0
[INFO] [stderr]   Downloaded datafusion-physical-expr v34.0.0
[INFO] [stderr]   Downloaded parquet v49.0.0
[INFO] [stderr]   Downloaded datafusion-physical-plan v34.0.0
[INFO] [stderr]   Downloaded datafusion-expr v34.0.0
[INFO] [stderr]   Downloaded datafusion v34.0.0
[INFO] [stderr]   Downloaded arrow-array v49.0.0
[INFO] [stderr]   Downloaded object_store v0.8.0
[INFO] [stderr]   Downloaded datafusion-common v34.0.0
[INFO] [stderr]   Downloaded datafusion-sql v34.0.0
[INFO] [stderr]   Downloaded sqlparser v0.40.0
[INFO] [stderr]   Downloaded arrow-ipc v49.0.0
[INFO] [stderr]   Downloaded arrow-buffer v49.0.0
[INFO] [stderr]   Downloaded arrow-data v49.0.0
[INFO] [stderr]   Downloaded arrow-json v49.0.0
[INFO] [stderr]   Downloaded arrow-ord v49.0.0
[INFO] [stderr]   Downloaded arrow-select v49.0.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+30f74ff0dc4d66debc8b50724c446f817e5f75f4" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 9686342844b385e01a544e8432a803befc7cead645c81ee97ad924a26c827094
[INFO] running `Command { std: "docker" "start" "-a" "9686342844b385e01a544e8432a803befc7cead645c81ee97ad924a26c827094", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "9686342844b385e01a544e8432a803befc7cead645c81ee97ad924a26c827094", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "9686342844b385e01a544e8432a803befc7cead645c81ee97ad924a26c827094", kill_on_drop: false }`
[INFO] [stdout] 9686342844b385e01a544e8432a803befc7cead645c81ee97ad924a26c827094
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+30f74ff0dc4d66debc8b50724c446f817e5f75f4" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 87103b48f36034d674dd88c5a7f7726feed72992ca69822dd29ec96cc41b9f8a
[INFO] running `Command { std: "docker" "start" "-a" "87103b48f36034d674dd88c5a7f7726feed72992ca69822dd29ec96cc41b9f8a", kill_on_drop: false }`
[INFO] [stderr]    Compiling libm v0.2.8
[INFO] [stderr]     Checking zerocopy v0.7.32
[INFO] [stderr]     Checking allocator-api2 v0.2.16
[INFO] [stderr]    Compiling siphasher v0.3.11
[INFO] [stderr]    Compiling regex-syntax v0.8.3
[INFO] [stderr]    Compiling rand_core v0.6.4
[INFO] [stderr]    Compiling num-traits v0.2.18
[INFO] [stderr]    Compiling ahash v0.8.11
[INFO] [stderr]    Compiling libc v0.2.153
[INFO] [stderr]     Checking lexical-util v0.8.5
[INFO] [stderr]     Checking arrow-schema v49.0.0
[INFO] [stderr]    Compiling semver v1.0.22
[INFO] [stderr]    Compiling strum_macros v0.25.3
[INFO] [stderr]     Checking aho-corasick v1.1.3
[INFO] [stderr]     Checking futures-io v0.3.30
[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]    Compiling phf_shared v0.11.2
[INFO] [stderr]    Compiling rand v0.8.5
[INFO] [stderr]     Checking futures-channel v0.3.30
[INFO] [stderr]    Compiling phf v0.11.2
[INFO] [stderr]    Compiling doc-comment v0.3.3
[INFO] [stderr]     Checking tokio v1.37.0
[INFO] [stderr]    Compiling rustc_version v0.4.0
[INFO] [stderr]     Checking lexical-write-integer v0.8.5
[INFO] [stderr]     Checking lexical-parse-integer v0.8.6
[INFO] [stderr]     Checking csv-core v0.1.11
[INFO] [stderr]     Checking futures-util v0.3.30
[INFO] [stderr]    Compiling jobserver v0.1.28
[INFO] [stderr]     Checking hashbrown v0.14.3
[INFO] [stderr]     Checking lexical-parse-float v0.8.5
[INFO] [stderr]     Checking lexical-write-float v0.8.5
[INFO] [stderr]    Compiling zstd-safe v7.1.0
[INFO] [stderr]     Checking csv v1.3.0
[INFO] [stderr]    Compiling cc v1.0.90
[INFO] [stderr]    Compiling phf_generator v0.11.2
[INFO] [stderr]    Compiling flatbuffers v23.5.26
[INFO] [stderr]    Compiling phf_codegen v0.11.2
[INFO] [stderr]     Checking serde_json v1.0.115
[INFO] [stderr]    Compiling generic-array v0.14.7
[INFO] [stderr]     Checking alloc-no-stdlib v2.0.4
[INFO] [stderr]     Checking regex-automata v0.4.6
[INFO] [stderr]     Checking tracing v0.1.40
[INFO] [stderr]     Checking lexical-core v0.8.5
[INFO] [stderr]     Checking alloc-stdlib v0.2.2
[INFO] [stderr]     Checking indexmap v2.2.6
[INFO] [stderr]    Compiling snap v1.1.1
[INFO] [stderr]    Compiling paste v1.0.14
[INFO] [stderr]     Checking arrow-schema v48.0.1
[INFO] [stderr]     Checking brotli-decompressor v2.5.1
[INFO] [stderr]     Checking twox-hash v1.6.3
[INFO] [stderr]     Checking integer-encoding v3.0.4
[INFO] [stderr]     Checking lz4_flex v0.11.3
[INFO] [stderr]    Compiling sqlparser_derive v0.2.2
[INFO] [stderr]    Compiling seq-macro v0.3.5
[INFO] [stderr]     Checking subtle v2.5.0
[INFO] [stderr]     Checking constant_time_eq v0.3.0
[INFO] [stderr]     Checking num-integer v0.1.46
[INFO] [stderr]     Checking num-complex v0.4.5
[INFO] [stderr]     Checking half v2.4.0
[INFO] [stderr]     Checking chrono v0.4.37
[INFO] [stderr]     Checking num-bigint v0.4.4
[INFO] [stderr]     Checking num-iter v0.1.44
[INFO] [stderr]     Checking ordered-float v2.10.1
[INFO] [stderr]     Checking brotli v3.5.0
[INFO] [stderr]     Checking crypto-common v0.1.6
[INFO] [stderr]     Checking block-buffer v0.10.4
[INFO] [stderr]     Checking linux-raw-sys v0.4.13
[INFO] [stderr]     Checking digest v0.10.7
[INFO] [stderr]     Checking arrayvec v0.7.4
[INFO] [stderr]    Compiling zstd-sys v2.0.10+zstd.1.5.6
[INFO] [stderr]    Compiling blake3 v1.5.1
[INFO] [stderr]     Checking thrift v0.17.0
[INFO] [stderr]    Compiling bzip2-sys v0.1.11+1.0.8
[INFO] [stderr]     Checking strum v0.25.0
[INFO] [stderr]    Compiling lzma-sys v0.1.20
[INFO] [stderr]     Checking comfy-table v7.1.0
[INFO] [stderr]     Checking sqlparser v0.40.0
[INFO] [stderr]    Compiling regex v1.10.4
[INFO] [stderr]     Checking fixedbitset v0.4.2
[INFO] [stderr]     Checking rustix v0.38.32
[INFO] [stderr]     Checking petgraph v0.6.4
[INFO] [stderr]    Compiling parse-zoneinfo v0.3.0
[INFO] [stderr]     Checking blake2 v0.10.6
[INFO] [stderr]     Checking futures-executor v0.3.30
[INFO] [stderr]     Checking num-rational v0.4.1
[INFO] [stderr]     Checking sha2 v0.10.8
[INFO] [stderr]     Checking md-5 v0.10.6
[INFO] [stderr]     Checking itertools v0.12.1
[INFO] [stderr]     Checking futures v0.3.30
[INFO] [stderr]     Checking uuid v1.8.0
[INFO] [stderr]     Checking unicode-segmentation v1.11.0
[INFO] [stderr]     Checking fastrand v2.0.2
[INFO] [stderr]    Compiling chrono-tz-build v0.2.1
[INFO] [stderr]     Checking num v0.4.1
[INFO] [stderr]     Checking arrow-buffer v49.0.0
[INFO] [stderr]     Checking arrow-buffer v48.0.1
[INFO] [stderr]     Checking dashmap v5.5.3
[INFO] [stderr]     Checking xz2 v0.1.7
[INFO] [stderr]     Checking noodles-bgzf v0.25.0
[INFO] [stderr]     Checking noodles-core v0.12.0
[INFO] [stderr]     Checking arrow-data v49.0.0
[INFO] [stderr]     Checking bit-vec v0.6.3
[INFO] [stderr]     Checking tokio-util v0.7.10
[INFO] [stderr]     Checking arrow-data v48.0.1
[INFO] [stderr]     Checking glob v0.3.1
[INFO] [stderr]    Compiling chrono-tz v0.8.6
[INFO] [stderr]     Checking noodles-csi v0.28.0
[INFO] [stderr]     Checking noodles-gff v0.25.0
[INFO] [stderr]     Checking tempfile v3.10.1
[INFO] [stderr]     Checking arrow-array v48.0.1
[INFO] [stderr]     Checking bzip2 v0.4.4
[INFO] [stderr]    Compiling snafu-derive v0.7.5
[INFO] [stderr]     Checking noodles v0.59.0
[INFO] [stderr]     Checking arrow-select v48.0.1
[INFO] [stderr]     Checking arrow-row v48.0.1
[INFO] [stderr]     Checking arrow-arith v48.0.1
[INFO] [stderr]     Checking arrow-cast v48.0.1
[INFO] [stderr]     Checking arrow-ord v48.0.1
[INFO] [stderr]     Checking arrow-string v48.0.1
[INFO] [stderr]     Checking snafu v0.7.5
[INFO] [stderr]     Checking object_store v0.8.0
[INFO] [stderr]     Checking object_store v0.7.1
[INFO] [stderr]     Checking arrow-csv v48.0.1
[INFO] [stderr]     Checking arrow-ipc v48.0.1
[INFO] [stderr]     Checking arrow-json v48.0.1
[INFO] [stderr]     Checking zstd v0.13.1
[INFO] [stderr]     Checking async-compression v0.4.6
[INFO] [stderr]     Checking arrow v48.0.1
[INFO] [stderr]     Checking arrow-array v49.0.0
[INFO] [stderr]     Checking arrow-select v49.0.0
[INFO] [stderr]     Checking arrow-arith v49.0.0
[INFO] [stderr]     Checking arrow-row v49.0.0
[INFO] [stderr]     Checking arrow-cast v49.0.0
[INFO] [stderr]     Checking arrow-string v49.0.0
[INFO] [stderr]     Checking arrow-ord v49.0.0
[INFO] [stderr]     Checking arrow-ipc v49.0.0
[INFO] [stderr]     Checking arrow-csv v49.0.0
[INFO] [stderr]     Checking arrow-json v49.0.0
[INFO] [stderr]     Checking arrow v49.0.0
[INFO] [stderr]     Checking parquet v49.0.0
[INFO] [stderr]     Checking datafusion-common v34.0.0
[INFO] [stderr]     Checking datafusion-expr v34.0.0
[INFO] [stderr]     Checking datafusion-physical-expr v34.0.0
[INFO] [stderr]     Checking datafusion-execution v34.0.0
[INFO] [stderr]     Checking datafusion-sql v34.0.0
[INFO] [stderr]     Checking datafusion-optimizer v34.0.0
[INFO] [stderr]     Checking datafusion-physical-plan v34.0.0
[INFO] [stderr]     Checking datafusion v34.0.0
[INFO] [stderr]     Checking exon-common v0.5.5
[INFO] [stderr]     Checking exon-gff v0.5.3 (/opt/rustwide/workdir)
[INFO] [stdout] error[E0308]: mismatched types
[INFO] [stdout]   --> src/config.rs:92:47
[INFO] [stdout]    |
[INFO] [stdout] 92 |     TableSchemaBuilder::new_with_field_fields(fields)
[INFO] [stdout]    |     ----------------------------------------- ^^^^^^ expected `arrow_schema::field::Field`, found `arrow::datatypes::Field`
[INFO] [stdout]    |     |
[INFO] [stdout]    |     arguments to this function are incorrect
[INFO] [stdout]    |
[INFO] [stdout]    = note: `arrow::datatypes::Field` and `arrow_schema::field::Field` have similar names, but are actually distinct types
[INFO] [stdout] note: `arrow::datatypes::Field` is defined in crate `arrow_schema`
[INFO] [stdout]   --> /opt/rustwide/cargo-home/registry/src/index.crates.io-6f17d22bba15001f/arrow-schema-48.0.1/src/field.rs:37:1
[INFO] [stdout]    |
[INFO] [stdout] 37 | pub struct Field {
[INFO] [stdout]    | ^^^^^^^^^^^^^^^^
[INFO] [stdout] note: `arrow_schema::field::Field` is defined in crate `arrow_schema`
[INFO] [stdout]   --> /opt/rustwide/cargo-home/registry/src/index.crates.io-6f17d22bba15001f/arrow-schema-49.0.0/src/field.rs:37:1
[INFO] [stdout]    |
[INFO] [stdout] 37 | pub struct Field {
[INFO] [stdout]    | ^^^^^^^^^^^^^^^^
[INFO] [stdout]    = note: perhaps two different versions of crate `arrow_schema` are being used?
[INFO] [stdout] note: associated function defined here
[INFO] [stdout]   --> /opt/rustwide/cargo-home/registry/src/index.crates.io-6f17d22bba15001f/exon-common-0.5.5/src/table_schema.rs:43:12
[INFO] [stdout]    |
[INFO] [stdout] 43 |     pub fn new_with_field_fields(file_fields: Vec<Field>) -> Self {
[INFO] [stdout]    |            ^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error[E0308]: mismatched types
[INFO] [stdout]   --> src/config.rs:92:47
[INFO] [stdout]    |
[INFO] [stdout] 92 |     TableSchemaBuilder::new_with_field_fields(fields)
[INFO] [stdout]    |     ----------------------------------------- ^^^^^^ expected `arrow_schema::field::Field`, found `arrow::datatypes::Field`
[INFO] [stdout]    |     |
[INFO] [stdout]    |     arguments to this function are incorrect
[INFO] [stdout]    |
[INFO] [stdout]    = note: `arrow::datatypes::Field` and `arrow_schema::field::Field` have similar names, but are actually distinct types
[INFO] [stdout] note: `arrow::datatypes::Field` is defined in crate `arrow_schema`
[INFO] [stdout]   --> /opt/rustwide/cargo-home/registry/src/index.crates.io-6f17d22bba15001f/arrow-schema-48.0.1/src/field.rs:37:1
[INFO] [stdout]    |
[INFO] [stdout] 37 | pub struct Field {
[INFO] [stdout]    | ^^^^^^^^^^^^^^^^
[INFO] [stdout] note: `arrow_schema::field::Field` is defined in crate `arrow_schema`
[INFO] [stdout]   --> /opt/rustwide/cargo-home/registry/src/index.crates.io-6f17d22bba15001f/arrow-schema-49.0.0/src/field.rs:37:1
[INFO] [stdout]    |
[INFO] [stdout] 37 | pub struct Field {
[INFO] [stdout]    | ^^^^^^^^^^^^^^^^
[INFO] [stdout]    = note: perhaps two different versions of crate `arrow_schema` are being used?
[INFO] [stdout] note: associated function defined here
[INFO] [stdout]   --> /opt/rustwide/cargo-home/registry/src/index.crates.io-6f17d22bba15001f/exon-common-0.5.5/src/table_schema.rs:43:12
[INFO] [stdout]    |
[INFO] [stdout] 43 |     pub fn new_with_field_fields(file_fields: Vec<Field>) -> Self {
[INFO] [stdout]    |            ^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: aborting due to 1 previous error
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] For more information about this error, try `rustc --explain E0308`.
[INFO] [stdout] 
[INFO] [stdout] error: aborting due to 1 previous error
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] For more information about this error, try `rustc --explain E0308`.
[INFO] [stdout] 
[INFO] [stderr] error: could not compile `exon-gff` (lib) due to 2 previous errors
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] [stderr] error: could not compile `exon-gff` (lib test) due to 2 previous errors
[INFO] running `Command { std: "docker" "inspect" "87103b48f36034d674dd88c5a7f7726feed72992ca69822dd29ec96cc41b9f8a", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "87103b48f36034d674dd88c5a7f7726feed72992ca69822dd29ec96cc41b9f8a", kill_on_drop: false }`
[INFO] [stdout] 87103b48f36034d674dd88c5a7f7726feed72992ca69822dd29ec96cc41b9f8a
