[INFO] cloning repository https://github.com/pairwise-alignment/pa-bench
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/pairwise-alignment/pa-bench" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fpairwise-alignment%2Fpa-bench", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fpairwise-alignment%2Fpa-bench'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] b380d62ac3d7a86f21cdd6788db7af1e822a8f09
[INFO] checking pairwise-alignment/pa-bench against master#dfdbe30004a095ad63951c4cd6e10a9a971a7399 for pr-120932
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fpairwise-alignment%2Fpa-bench" "/workspace/builds/worker-6-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-6-tc1/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/pairwise-alignment/pa-bench on toolchain dfdbe30004a095ad63951c4cd6e10a9a971a7399
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+dfdbe30004a095ad63951c4cd6e10a9a971a7399" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/pairwise-alignment/pa-bench
[INFO] finished tweaking git repo https://github.com/pairwise-alignment/pa-bench
[INFO] tweaked toml for git repo https://github.com/pairwise-alignment/pa-bench written to /workspace/builds/worker-6-tc1/source/Cargo.toml
[INFO] crate git repo https://github.com/pairwise-alignment/pa-bench already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+dfdbe30004a095ad63951c4cd6e10a9a971a7399" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr] warning: /workspace/builds/worker-6-tc1/source/Cargo.toml: unused manifest key: profile.release.panick
[INFO] [stderr]     Updating git repository `https://github.com/RagnarGrootKoerkamp/astar-pairwise-aligner`
[INFO] [stderr]     Updating git repository `https://github.com/pairwise-alignment/edlib-rs`
[INFO] [stderr]     Updating git submodule `https://github.com/Martinsos/edlib`
[INFO] [stderr]     Updating git repository `https://github.com/pairwise-alignment/ksw2-sys`
[INFO] [stderr]     Updating git submodule `https://github.com/pairwise-alignment/ksw2.git`
[INFO] [stderr]     Updating git repository `https://github.com/pairwise-alignment/pa-types`
[INFO] [stderr]     Updating git repository `https://github.com/Daniel-Liu-c0deb0t/parasailors-new`
[INFO] [stderr]     Updating git repository `https://github.com/pairwise-alignment/rust-wfa2`
[INFO] [stderr]     Updating git submodule `https://github.com/ragnargrootkoerkamp/WFA2-lib.git`
[INFO] [stderr]     Updating git repository `https://github.com/Daniel-Liu-c0deb0t/triple_accel`
[INFO] [stderr]     Updating git repository `https://github.com/Daniel-Liu-c0deb0t/block-aligner`
[INFO] [stderr]     Updating git repository `https://github.com/pairwise-alignment/pa-generate`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]     Updating git repository `https://github.com/andrewprivate/parasail-sys`
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded ordered-float v3.7.0
[INFO] [stderr]   Downloaded parse_duration v2.1.1
[INFO] [stderr]   Downloaded anstyle-parse v0.2.1
[INFO] [stderr]   Downloaded prettyplease v0.2.12
[INFO] [stderr]   Downloaded streaming-stats v0.2.3
[INFO] [stderr]   Downloaded serde v1.0.180
[INFO] [stderr]   Downloaded cipher v0.4.4
[INFO] [stderr]   Downloaded anstyle v1.0.1
[INFO] [stderr]   Downloaded xattr v0.2.3
[INFO] [stderr]   Downloaded parse-size v1.0.0
[INFO] [stderr]   Downloaded errno v0.3.2
[INFO] [stderr]   Downloaded thiserror v1.0.44
[INFO] [stderr]   Downloaded safe_arch v0.7.1
[INFO] [stderr]   Downloaded quote v1.0.32
[INFO] [stderr]   Downloaded zip-extract v0.1.2
[INFO] [stderr]   Downloaded rustix v0.36.15
[INFO] [stderr]   Downloaded regex-automata v0.3.4
[INFO] [stderr]   Downloaded rustix v0.38.4
[INFO] [stderr]   Downloaded rustix v0.37.23
[INFO] [stderr]   Downloaded serde_derive v1.0.180
[INFO] [stderr]   Downloaded linux-raw-sys v0.4.5
[INFO] [stderr]   Downloaded rustls-webpki v0.101.2
[INFO] [stderr]   Downloaded wait4 v0.1.3
[INFO] [stderr]   Downloaded bio v1.3.0
[INFO] [stderr]   Downloaded serde_json v1.0.104
[INFO] [stderr]   Downloaded webpki-roots v0.23.1
[INFO] [stderr]   Downloaded ropey v1.6.0
[INFO] [stderr]   Downloaded aes v0.8.3
[INFO] [stderr]   Downloaded syn v2.0.28
[INFO] [stderr]   Downloaded rustls v0.21.5
[INFO] [stderr]   Downloaded ureq v2.7.1
[INFO] [stderr]   Downloaded time v0.3.24
[INFO] [stderr]   Downloaded clap_builder v4.3.19
[INFO] [stderr]   Downloaded bindgen v0.63.0
[INFO] [stderr]   Downloaded bindgen v0.66.1
[INFO] [stderr]   Downloaded bitflags v2.3.3
[INFO] [stderr]   Downloaded matrixmultiply v0.3.7
[INFO] [stderr]   Downloaded rustls-webpki v0.100.1
[INFO] [stderr]   Downloaded wide v0.7.11
[INFO] [stderr]   Downloaded serde_yaml v0.9.25
[INFO] [stderr]   Downloaded clang-sys v1.6.1
[INFO] [stderr]   Downloaded str_indices v0.4.1
[INFO] [stderr]   Downloaded tar v0.4.39
[INFO] [stderr]   Downloaded thiserror-impl v1.0.44
[INFO] [stderr]   Downloaded core_affinity v0.7.6
[INFO] [stderr]   Downloaded filetime v0.2.21
[INFO] [stderr]   Downloaded password-hash v0.4.2
[INFO] [stderr]   Downloaded unsafe-libyaml v0.2.9
[INFO] [stderr]   Downloaded terminal_size v0.2.6
[INFO] [stderr]   Downloaded zip v0.6.6
[INFO] [stderr]   Downloaded clap v4.3.19
[INFO] [stderr]   Downloaded ctrlc v3.4.0
[INFO] [stderr]   Downloaded clap_derive v4.3.12
[INFO] [stderr]   Downloaded which v4.4.0
[INFO] [stderr]   Downloaded anyhow v1.0.72
[INFO] [stderr]   Downloaded deranged v0.3.6
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+dfdbe30004a095ad63951c4cd6e10a9a971a7399" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] e873ccc4f79ea9ee15ec79e93d1fbaf987f4656405147c80eef768884936afb6
[INFO] running `Command { std: "docker" "start" "-a" "e873ccc4f79ea9ee15ec79e93d1fbaf987f4656405147c80eef768884936afb6", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "e873ccc4f79ea9ee15ec79e93d1fbaf987f4656405147c80eef768884936afb6", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "e873ccc4f79ea9ee15ec79e93d1fbaf987f4656405147c80eef768884936afb6", kill_on_drop: false }`
[INFO] [stdout] e873ccc4f79ea9ee15ec79e93d1fbaf987f4656405147c80eef768884936afb6
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+dfdbe30004a095ad63951c4cd6e10a9a971a7399" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 03947b7bc6f2824fbf860b8145315d9c13df58083781bdfeaacc8d88e54531ad
[INFO] running `Command { std: "docker" "start" "-a" "03947b7bc6f2824fbf860b8145315d9c13df58083781bdfeaacc8d88e54531ad", kill_on_drop: false }`
[INFO] [stderr] warning: /opt/rustwide/workdir/Cargo.toml: unused manifest key: profile.release.panick
[INFO] [stderr]    Compiling libc v0.2.147
[INFO] [stderr]    Compiling libm v0.2.7
[INFO] [stderr]    Compiling num-traits v0.2.16
[INFO] [stderr]    Compiling typenum v1.16.0
[INFO] [stderr]    Compiling serde v1.0.180
[INFO] [stderr]    Compiling num-integer v0.1.45
[INFO] [stderr]    Compiling serde_derive v1.0.180
[INFO] [stderr]    Compiling clang-sys v1.6.1
[INFO] [stderr]    Compiling rustix v0.38.4
[INFO] [stderr]    Compiling memchr v2.5.0
[INFO] [stderr]    Compiling rustix v0.37.23
[INFO] [stderr]     Checking bitflags v2.3.3
[INFO] [stderr]    Compiling quote v1.0.32
[INFO] [stderr]     Checking linux-raw-sys v0.4.5
[INFO] [stderr]    Compiling regex-syntax v0.7.4
[INFO] [stderr]    Compiling libloading v0.7.4
[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]    Compiling syn v2.0.28
[INFO] [stderr]     Checking either v1.9.0
[INFO] [stderr]     Checking utf8parse v0.2.1
[INFO] [stderr]     Checking anstyle-parse v0.2.1
[INFO] [stderr]    Compiling num-bigint v0.4.3
[INFO] [stderr]    Compiling nom v7.1.3
[INFO] [stderr]    Compiling rustc-hash v1.1.0
[INFO] [stderr]    Compiling peeking_take_while v0.1.2
[INFO] [stderr]    Compiling shlex v1.1.0
[INFO] [stderr]     Checking anstyle v1.0.1
[INFO] [stderr]     Checking colorchoice v1.0.0
[INFO] [stderr]     Checking anstyle-query v1.0.0
[INFO] [stderr]    Compiling jobserver v0.1.26
[INFO] [stderr]    Compiling which v4.4.0
[INFO] [stderr]    Compiling lazycell v1.3.0
[INFO] [stderr]    Compiling matrixmultiply v0.3.7
[INFO] [stderr]    Compiling num-rational v0.4.1
[INFO] [stderr]    Compiling prettyplease v0.2.12
[INFO] [stderr]    Compiling cc v1.0.79
[INFO] [stderr]     Checking bytemuck v1.13.1
[INFO] [stderr]     Checking itertools v0.10.5
[INFO] [stderr]     Checking aho-corasick v1.0.2
[INFO] [stderr]    Compiling thiserror v1.0.44
[INFO] [stderr]     Checking is-terminal v0.4.9
[INFO] [stderr]     Checking rawpointer v0.2.1
[INFO] [stderr]     Checking safe_arch v0.7.1
[INFO] [stderr]     Checking anstream v0.3.2
[INFO] [stderr]    Compiling bindgen v0.66.1
[INFO] [stderr]    Compiling feature-probe v0.1.1
[INFO] [stderr]     Checking wide v0.7.11
[INFO] [stderr]     Checking num-complex v0.4.3
[INFO] [stderr]     Checking approx v0.5.1
[INFO] [stderr]     Checking parse-size v1.0.0
[INFO] [stderr]     Checking getrandom v0.2.10
[INFO] [stderr]     Checking io-lifetimes v1.0.11
[INFO] [stderr]    Compiling bv v0.11.1
[INFO] [stderr]     Checking rand_core v0.6.4
[INFO] [stderr]     Checking generic-array v0.14.7
[INFO] [stderr]     Checking rand_chacha v0.3.1
[INFO] [stderr]    Compiling proc-macro-error-attr v1.0.4
[INFO] [stderr]    Compiling regex-automata v0.3.4
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]     Checking rand v0.8.5
[INFO] [stderr]    Compiling anyhow v1.0.72
[INFO] [stderr]    Compiling cexpr v0.6.0
[INFO] [stderr]    Compiling cmake v0.1.50
[INFO] [stderr]     Checking csv-core v0.1.10
[INFO] [stderr]     Checking smallvec v1.11.0
[INFO] [stderr]     Checking bit-vec v0.6.3
[INFO] [stderr]     Checking triple_accel v0.4.0
[INFO] [stderr]     Checking bit-set v0.5.3
[INFO] [stderr]     Checking petgraph v0.6.3
[INFO] [stderr]     Checking simba v0.6.0
[INFO] [stderr]     Checking rand_distr v0.4.3
[INFO] [stderr]     Checking terminal_size v0.2.6
[INFO] [stderr]     Checking clap_builder v4.3.19
[INFO] [stderr]     Checking ndarray v0.15.6
[INFO] [stderr]     Checking fxhash v0.2.1
[INFO] [stderr]     Checking itertools-num v0.1.3
[INFO] [stderr]     Checking ordered-float v3.7.0
[INFO] [stderr]     Checking bytecount v0.6.3
[INFO] [stderr]     Checking custom_derive v0.1.7
[INFO] [stderr]     Checking vec_map v0.8.2
[INFO] [stderr]     Checking csv v1.2.2
[INFO] [stderr]     Checking multimap v0.8.3
[INFO] [stderr]     Checking crypto-common v0.1.6
[INFO] [stderr]    Compiling ring v0.16.20
[INFO] [stderr]    Compiling bindgen v0.63.0
[INFO] [stderr]     Checking str_indices v0.4.1
[INFO] [stderr]     Checking itertools v0.11.0
[INFO] [stderr]     Checking ropey v1.6.0
[INFO] [stderr]    Compiling zstd-sys v2.0.8+zstd.1.5.5
[INFO] [stderr]     Checking block-buffer v0.10.4
[INFO] [stderr]    Compiling regex v1.9.1
[INFO] [stderr] error: could not compile `syn` (lib)
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/rustup-home/toolchains/dfdbe30004a095ad63951c4cd6e10a9a971a7399/bin/rustc --crate-name syn --edition=2018 /opt/rustwide/cargo-home/registry/src/index.crates.io-6f17d22bba15001f/syn-1.0.109/src/lib.rs --error-format=json --json=diagnostic-rendered-ansi,artifacts,future-incompat --crate-type lib --emit=dep-info,metadata,link -C embed-bitcode=no --cfg 'feature="clone-impls"' --cfg 'feature="default"' --cfg 'feature="derive"' --cfg 'feature="extra-traits"' --cfg 'feature="full"' --cfg 'feature="parsing"' --cfg 'feature="printing"' --cfg 'feature="proc-macro"' --cfg 'feature="quote"' --cfg 'feature="visit-mut"' -C metadata=1816542dc4d3ad2c -C extra-filename=-1816542dc4d3ad2c --out-dir /opt/rustwide/target/debug/deps -L dependency=/opt/rustwide/target/debug/deps --extern proc_macro2=/opt/rustwide/target/debug/deps/libproc_macro2-f21fe8ecedcb5f57.rmeta --extern quote=/opt/rustwide/target/debug/deps/libquote-210eeca9952c32f0.rmeta --extern unicode_ident=/opt/rustwide/target/debug/deps/libunicode_ident-134c9022163e6338.rmeta --cap-lints allow --cap-lints=forbid` (signal: 9, SIGKILL: kill)
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] running `Command { std: "docker" "inspect" "03947b7bc6f2824fbf860b8145315d9c13df58083781bdfeaacc8d88e54531ad", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "03947b7bc6f2824fbf860b8145315d9c13df58083781bdfeaacc8d88e54531ad", kill_on_drop: false }`
[INFO] [stdout] 03947b7bc6f2824fbf860b8145315d9c13df58083781bdfeaacc8d88e54531ad