[INFO] cloning repository https://github.com/IMTMarburg/mbf_bam [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/IMTMarburg/mbf_bam" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FIMTMarburg%2Fmbf_bam", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FIMTMarburg%2Fmbf_bam'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] d8c27588234d1dc29b6de853883d5a95f6f344dd [INFO] checking IMTMarburg/mbf_bam against master#5518eaa946291f00471af8b254b2a1715f234882 for pr-120393 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FIMTMarburg%2Fmbf_bam" "/workspace/builds/worker-4-tc1/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-4-tc1/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/IMTMarburg/mbf_bam on toolchain 5518eaa946291f00471af8b254b2a1715f234882 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+5518eaa946291f00471af8b254b2a1715f234882" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/IMTMarburg/mbf_bam [INFO] finished tweaking git repo https://github.com/IMTMarburg/mbf_bam [INFO] tweaked toml for git repo https://github.com/IMTMarburg/mbf_bam written to /workspace/builds/worker-4-tc1/source/Cargo.toml [INFO] crate git repo https://github.com/IMTMarburg/mbf_bam already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+5518eaa946291f00471af8b254b2a1715f234882" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded bio-types v0.12.0 [INFO] [stderr] Downloaded cc v1.0.35 [INFO] [stderr] Downloaded triple_accel v0.3.4 [INFO] [stderr] Downloaded pyo3-macros-backend v0.14.1 [INFO] [stderr] Downloaded statrs v0.14.0 [INFO] [stderr] Downloaded rust-htslib v0.38.2 [INFO] [stderr] Downloaded bio v0.37.0 [INFO] [stderr] Downloaded hts-sys v2.0.1 [INFO] [stderr] Downloaded curl-sys v0.4.36+curl-7.71.1 [INFO] [stderr] Downloaded pyo3-build-config v0.14.1 [INFO] [stderr] Downloaded pyo3 v0.14.1 [INFO] [stderr] Downloaded openssl-src v111.12.0+1.1.1h [INFO] [stderr] Downloaded pyo3-macros v0.14.1 [INFO] [stderr] Downloaded fs-utils v1.1.0 [INFO] [stderr] Downloaded lzma-sys v0.1.17 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+5518eaa946291f00471af8b254b2a1715f234882" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 3209784d095b336ff9622f5e6d62441ec39abefcb5241c1492d8907334890095 [INFO] running `Command { std: "docker" "start" "-a" "3209784d095b336ff9622f5e6d62441ec39abefcb5241c1492d8907334890095", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "3209784d095b336ff9622f5e6d62441ec39abefcb5241c1492d8907334890095", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "3209784d095b336ff9622f5e6d62441ec39abefcb5241c1492d8907334890095", kill_on_drop: false }` [INFO] [stdout] 3209784d095b336ff9622f5e6d62441ec39abefcb5241c1492d8907334890095 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+5518eaa946291f00471af8b254b2a1715f234882" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 000b914e28da963aabf6c376d7e28553a28d0a307ca3ce27196b6187d22099a7 [INFO] running `Command { std: "docker" "start" "-a" "000b914e28da963aabf6c376d7e28553a28d0a307ca3ce27196b6187d22099a7", kill_on_drop: false }` [INFO] [stderr] Compiling autocfg v1.0.1 [INFO] [stderr] Compiling libc v0.2.79 [INFO] [stderr] Compiling crossbeam-utils v0.8.5 [INFO] [stderr] Compiling crossbeam-epoch v0.9.5 [INFO] [stderr] Compiling lazy_static v1.4.0 [INFO] [stderr] Compiling scopeguard v1.1.0 [INFO] [stderr] Compiling either v1.5.2 [INFO] [stderr] Compiling proc-macro2 v1.0.27 [INFO] [stderr] Compiling unicode-xid v0.2.0 [INFO] [stderr] Compiling pkg-config v0.3.14 [INFO] [stderr] Compiling syn v1.0.73 [INFO] [stderr] Compiling libm v0.2.1 [INFO] [stderr] Compiling proc-macro2 v0.4.27 [INFO] [stderr] Compiling unicode-xid v0.1.0 [INFO] [stderr] Compiling syn v0.15.30 [INFO] [stderr] Compiling memchr v2.2.1 [INFO] [stderr] Checking ppv-lite86 v0.2.10 [INFO] [stderr] Compiling serde v1.0.90 [INFO] [stderr] Compiling pyo3-build-config v0.14.1 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Checking rawpointer v0.2.1 [INFO] [stderr] Compiling once_cell v1.8.0 [INFO] [stderr] Compiling getrandom v0.1.16 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling memoffset v0.6.4 [INFO] [stderr] Compiling rayon v1.5.1 [INFO] [stderr] Compiling num-traits v0.2.14 [INFO] [stderr] Compiling num-integer v0.1.44 [INFO] [stderr] Compiling num-rational v0.3.2 [INFO] [stderr] Compiling crossbeam-channel v0.5.1 [INFO] [stderr] Compiling byteorder v1.3.1 [INFO] [stderr] Compiling unicode-segmentation v1.8.0 [INFO] [stderr] Compiling quick-error v1.2.2 [INFO] [stderr] Compiling typenum v1.13.0 [INFO] [stderr] Compiling proc-macro-hack v0.5.18 [INFO] [stderr] Compiling fs-utils v1.1.0 [INFO] [stderr] Checking aho-corasick v0.7.6 [INFO] [stderr] Compiling quote v1.0.9 [INFO] [stderr] Compiling quote v0.6.12 [INFO] [stderr] Checking getrandom v0.2.3 [INFO] [stderr] Compiling num_cpus v1.10.0 [INFO] [stderr] Compiling crossbeam-deque v0.8.0 [INFO] [stderr] Checking rand_core v0.6.3 [INFO] [stderr] Compiling heck v0.3.3 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling indexmap v1.7.0 [INFO] [stderr] Checking thread_local v0.3.6 [INFO] [stderr] Compiling ryu v1.0.5 [INFO] [stderr] Checking matches v0.1.8 [INFO] [stderr] Compiling autocfg v0.1.2 [INFO] [stderr] Compiling rayon-core v1.9.1 [INFO] [stderr] Compiling paste v1.0.5 [INFO] [stderr] Checking smallvec v0.6.9 [INFO] [stderr] Checking rand_chacha v0.3.1 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Checking regex-syntax v0.6.12 [INFO] [stderr] Compiling glob v0.3.0 [INFO] [stderr] Checking unicode-normalization v0.1.8 [INFO] [stderr] Compiling bv v0.11.1 [INFO] [stderr] Checking unicode-bidi v0.3.4 [INFO] [stderr] Checking rand v0.8.4 [INFO] [stderr] Compiling backtrace v0.3.15 [INFO] [stderr] Checking rand_core v0.5.1 [INFO] [stderr] Checking num-complex v0.3.1 [INFO] [stderr] Checking approx v0.4.0 [INFO] [stderr] Checking matrixmultiply v0.3.1 [INFO] [stderr] Checking instant v0.1.7 [INFO] [stderr] Compiling crc32fast v1.2.0 [INFO] [stderr] Checking regex-automata v0.1.10 [INFO] [stderr] Checking hashbrown v0.11.2 [INFO] [stderr] Compiling ndarray v0.14.0 [INFO] [stderr] Compiling anyhow v1.0.42 [INFO] [stderr] Checking smallvec v1.4.2 [INFO] [stderr] Compiling failure_derive v0.1.5 [INFO] [stderr] Checking simba v0.4.0 [INFO] [stderr] Compiling unindent v0.1.7 [INFO] [stderr] Checking rand_distr v0.4.1 [INFO] [stderr] Compiling paste-impl v0.1.18 [INFO] [stderr] Checking parking_lot_core v0.8.0 [INFO] [stderr] Checking rand_chacha v0.2.2 [INFO] [stderr] Compiling pyo3 v0.14.1 [INFO] [stderr] Checking idna v0.2.0 [INFO] [stderr] Checking csv-core v0.1.10 [INFO] [stderr] Checking matrixmultiply v0.2.4 [INFO] [stderr] Checking lock_api v0.4.1 [INFO] [stderr] Checking custom_derive v0.1.7 [INFO] [stderr] Checking percent-encoding v2.1.0 [INFO] [stderr] Checking adler32 v1.0.4 [INFO] [stderr] Checking array-macro v1.0.5 [INFO] [stderr] Checking bit-vec v0.5.1 [INFO] [stderr] Compiling bio v0.37.0 [INFO] [stderr] Checking itoa v0.4.3 [INFO] [stderr] Checking fixedbitset v0.2.0 [INFO] [stderr] Checking rustc-demangle v0.1.13 [INFO] [stderr] Checking parking_lot v0.11.0 [INFO] [stderr] Checking miniz_oxide v0.3.5 [INFO] [stderr] Checking rand v0.7.3 [INFO] [stderr] Checking petgraph v0.5.1 [INFO] [stderr] Checking bit-set v0.5.1 [INFO] [stderr] Checking url v2.1.1 [INFO] [stderr] Checking paste v0.1.18 [INFO] [stderr] Checking itertools v0.9.0 [INFO] [stderr] Checking fxhash v0.2.1 [INFO] [stderr] Checking approx v0.3.2 [INFO] [stderr] Checking ordered-float v1.0.2 [INFO] [stderr] Checking itertools-num v0.1.3 [INFO] [stderr] Checking triple_accel v0.3.4 [INFO] [stderr] Checking bytecount v0.6.2 [INFO] [stderr] Checking regex v1.3.1 [INFO] [stderr] Checking ieee754 v0.2.6 [INFO] [stderr] Checking fnv v1.0.6 [INFO] [stderr] Checking linear-map v1.2.0 [INFO] [stderr] Checking strum v0.20.0 [INFO] [stderr] Checking ex v0.1.3 [INFO] [stderr] Checking flate2 v1.0.13 [INFO] [stderr] Compiling synstructure v0.10.1 [INFO] [stderr] Compiling serde_derive v1.0.90 [INFO] [stderr] Compiling cc v1.0.35 [INFO] [stderr] Compiling openssl-src v111.12.0+1.1.1h [INFO] [stderr] Compiling openssl-sys v0.9.65 [INFO] [stderr] Compiling libz-sys v1.1.2 [INFO] [stderr] Compiling bzip2-sys v0.1.9+1.0.8 [INFO] [stderr] Compiling lzma-sys v0.1.17 [INFO] [stderr] Compiling curl-sys v0.4.36+curl-7.71.1 [INFO] [stderr] Compiling backtrace-sys v0.1.28 [INFO] [stderr] Compiling hts-sys v2.0.1 [INFO] [stderr] Compiling pyo3-macros-backend v0.14.1 [INFO] [stderr] Checking failure v0.1.5 [INFO] [stderr] Compiling thiserror-impl v1.0.21 [INFO] [stderr] Compiling strum_macros v0.20.1 [INFO] [stderr] Compiling derive-new v0.5.8 [INFO] [stderr] Compiling enum-map-derive v0.4.6 [INFO] [stderr] Compiling indoc-impl v0.3.6 [INFO] [stderr] Compiling getset v0.0.9 [INFO] [stderr] Checking indoc v0.3.6 [INFO] [stderr] Checking enum-map v0.6.4 [INFO] [stderr] Compiling pyo3-macros v0.14.1 [INFO] [stderr] Checking thiserror v1.0.21 [INFO] [stderr] Checking bio-types v0.12.0 [INFO] [stderr] Checking nalgebra v0.26.2 [INFO] [stderr] Checking bstr v0.2.15 [INFO] [stderr] Checking multimap v0.8.3 [INFO] [stderr] Checking vec_map v0.8.1 [INFO] [stderr] Checking csv v1.1.6 [INFO] [stderr] Checking statrs v0.14.0 [INFO] [stderr] Checking rust-htslib v0.38.2 [INFO] [stderr] Checking mbf_bam v0.3.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 30.51s [INFO] [stderr] warning: the following packages contain code that will be rejected by a future version of Rust: nalgebra v0.26.2, pyo3 v0.14.1, pyo3-build-config v0.14.1, pyo3-macros-backend v0.14.1 [INFO] [stderr] note: to see what the problems were, use the option `--future-incompat-report`, or run `cargo report future-incompatibilities --id 1` [INFO] running `Command { std: "docker" "inspect" "000b914e28da963aabf6c376d7e28553a28d0a307ca3ce27196b6187d22099a7", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "000b914e28da963aabf6c376d7e28553a28d0a307ca3ce27196b6187d22099a7", kill_on_drop: false }` [INFO] [stdout] 000b914e28da963aabf6c376d7e28553a28d0a307ca3ce27196b6187d22099a7 [INFO] checking IMTMarburg/mbf_bam against try#7622c0f807a4e13c4db886a1681bf343795692df+rustflags=-Dnon_local_definitions for pr-120393 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FIMTMarburg%2Fmbf_bam" "/workspace/builds/worker-4-tc2/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-4-tc2/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/IMTMarburg/mbf_bam on toolchain 7622c0f807a4e13c4db886a1681bf343795692df [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+7622c0f807a4e13c4db886a1681bf343795692df" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/IMTMarburg/mbf_bam [INFO] finished tweaking git repo https://github.com/IMTMarburg/mbf_bam [INFO] tweaked toml for git repo https://github.com/IMTMarburg/mbf_bam written to /workspace/builds/worker-4-tc2/source/Cargo.toml [INFO] crate git repo https://github.com/IMTMarburg/mbf_bam already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+7622c0f807a4e13c4db886a1681bf343795692df" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+7622c0f807a4e13c4db886a1681bf343795692df" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 030baaeb1a99d85421b700d52f494743d8e3a80ef93049a48b8e874a9243b775 [INFO] running `Command { std: "docker" "start" "-a" "030baaeb1a99d85421b700d52f494743d8e3a80ef93049a48b8e874a9243b775", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "030baaeb1a99d85421b700d52f494743d8e3a80ef93049a48b8e874a9243b775", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "030baaeb1a99d85421b700d52f494743d8e3a80ef93049a48b8e874a9243b775", kill_on_drop: false }` [INFO] [stdout] 030baaeb1a99d85421b700d52f494743d8e3a80ef93049a48b8e874a9243b775 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid -Dnon_local_definitions" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+7622c0f807a4e13c4db886a1681bf343795692df" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 6373254bb161ddc06e66a232e92381968cf399da5661cc037d048e39fb4eb7d5 [INFO] running `Command { std: "docker" "start" "-a" "6373254bb161ddc06e66a232e92381968cf399da5661cc037d048e39fb4eb7d5", kill_on_drop: false }` [INFO] [stderr] Compiling autocfg v1.0.1 [INFO] [stderr] Compiling libc v0.2.79 [INFO] [stderr] Compiling crossbeam-utils v0.8.5 [INFO] [stderr] Compiling crossbeam-epoch v0.9.5 [INFO] [stderr] Compiling lazy_static v1.4.0 [INFO] [stderr] Compiling scopeguard v1.1.0 [INFO] [stderr] Compiling either v1.5.2 [INFO] [stderr] Compiling proc-macro2 v1.0.27 [INFO] [stderr] Compiling unicode-xid v0.2.0 [INFO] [stderr] Compiling pkg-config v0.3.14 [INFO] [stderr] Compiling syn v1.0.73 [INFO] [stderr] Compiling libm v0.2.1 [INFO] [stderr] Compiling proc-macro2 v0.4.27 [INFO] [stderr] Compiling unicode-xid v0.1.0 [INFO] [stderr] Compiling syn v0.15.30 [INFO] [stderr] Compiling memchr v2.2.1 [INFO] [stderr] Compiling serde v1.0.90 [INFO] [stderr] Checking ppv-lite86 v0.2.10 [INFO] [stderr] Compiling pyo3-build-config v0.14.1 [INFO] [stderr] Checking rawpointer v0.2.1 [INFO] [stderr] Compiling once_cell v1.8.0 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling getrandom v0.1.16 [INFO] [stderr] Compiling memoffset v0.6.4 [INFO] [stderr] Compiling rayon v1.5.1 [INFO] [stderr] Compiling num-traits v0.2.14 [INFO] [stderr] Compiling crossbeam-channel v0.5.1 [INFO] [stderr] Compiling num-integer v0.1.44 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling num-rational v0.3.2 [INFO] [stderr] Compiling unicode-segmentation v1.8.0 [INFO] [stderr] Compiling proc-macro-hack v0.5.18 [INFO] [stderr] Compiling typenum v1.13.0 [INFO] [stderr] Compiling quote v0.6.12 [INFO] [stderr] Compiling quick-error v1.2.2 [INFO] [stderr] Compiling byteorder v1.3.1 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling quote v1.0.9 [INFO] [stderr] Checking getrandom v0.2.3 [INFO] [stderr] Compiling heck v0.3.3 [INFO] [stderr] Compiling crossbeam-deque v0.8.0 [INFO] [stderr] Compiling fs-utils v1.1.0 [INFO] [stderr] Checking rand_core v0.6.3 [INFO] [stderr] Compiling num_cpus v1.10.0 [INFO] [stderr] Checking aho-corasick v0.7.6 [INFO] [stderr] Compiling indexmap v1.7.0 [INFO] [stderr] Checking rand_chacha v0.3.1 [INFO] [stderr] Checking thread_local v0.3.6 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Checking smallvec v0.6.9 [INFO] [stderr] Checking regex-syntax v0.6.12 [INFO] [stderr] Compiling ryu v1.0.5 [INFO] [stderr] Compiling rayon-core v1.9.1 [INFO] [stderr] Compiling autocfg v0.1.2 [INFO] [stderr] Checking rand v0.8.4 [INFO] [stderr] Compiling paste v1.0.5 [INFO] [stderr] Compiling glob v0.3.0 [INFO] [stderr] Checking matches v0.1.8 [INFO] [stderr] Checking num-complex v0.3.1 [INFO] [stderr] Checking approx v0.4.0 [INFO] [stderr] Checking unicode-bidi v0.3.4 [INFO] [stderr] Checking unicode-normalization v0.1.8 [INFO] [stderr] Compiling backtrace v0.3.15 [INFO] [stderr] Compiling bv v0.11.1 [INFO] [stderr] Checking rand_core v0.5.1 [INFO] [stderr] Checking matrixmultiply v0.3.1 [INFO] [stderr] Checking instant v0.1.7 [INFO] [stderr] Compiling crc32fast v1.2.0 [INFO] [stderr] Compiling unindent v0.1.7 [INFO] [stderr] Compiling anyhow v1.0.42 [INFO] [stderr] Checking hashbrown v0.11.2 [INFO] [stderr] Checking regex-automata v0.1.10 [INFO] [stderr] Checking smallvec v1.4.2 [INFO] [stderr] Checking rand_distr v0.4.1 [INFO] [stderr] Checking simba v0.4.0 [INFO] [stderr] Compiling failure_derive v0.1.5 [INFO] [stderr] Compiling ndarray v0.14.0 [INFO] [stderr] Checking parking_lot_core v0.8.0 [INFO] [stderr] Checking rand_chacha v0.2.2 [INFO] [stderr] Compiling paste-impl v0.1.18 [INFO] [stderr] Compiling pyo3 v0.14.1 [INFO] [stderr] Checking csv-core v0.1.10 [INFO] [stderr] Checking matrixmultiply v0.2.4 [INFO] [stderr] Checking idna v0.2.0 [INFO] [stderr] Checking lock_api v0.4.1 [INFO] [stderr] Checking custom_derive v0.1.7 [INFO] [stderr] Compiling bio v0.37.0 [INFO] [stderr] Checking itoa v0.4.3 [INFO] [stderr] Checking rustc-demangle v0.1.13 [INFO] [stderr] Checking percent-encoding v2.1.0 [INFO] [stderr] Checking bit-vec v0.5.1 [INFO] [stderr] Checking fixedbitset v0.2.0 [INFO] [stderr] Checking adler32 v1.0.4 [INFO] [stderr] Checking regex v1.3.1 [INFO] [stderr] Checking array-macro v1.0.5 [INFO] [stderr] Checking parking_lot v0.11.0 [INFO] [stderr] Checking bit-set v0.5.1 [INFO] [stderr] Checking rand v0.7.3 [INFO] [stderr] Checking url v2.1.1 [INFO] [stderr] Checking miniz_oxide v0.3.5 [INFO] [stderr] Checking petgraph v0.5.1 [INFO] [stderr] Compiling synstructure v0.10.1 [INFO] [stderr] Checking itertools v0.9.0 [INFO] [stderr] Checking fxhash v0.2.1 [INFO] [stderr] Checking ordered-float v1.0.2 [INFO] [stderr] Checking approx v0.3.2 [INFO] [stderr] Checking itertools-num v0.1.3 [INFO] [stderr] Checking paste v0.1.18 [INFO] [stderr] Checking linear-map v1.2.0 [INFO] [stderr] Checking strum v0.20.0 [INFO] [stderr] Checking ieee754 v0.2.6 [INFO] [stderr] Checking fnv v1.0.6 [INFO] [stderr] Checking bytecount v0.6.2 [INFO] [stderr] Checking triple_accel v0.3.4 [INFO] [stderr] Checking flate2 v1.0.13 [INFO] [stderr] Checking ex v0.1.3 [INFO] [stderr] Compiling serde_derive v1.0.90 [INFO] [stderr] Compiling pyo3-macros-backend v0.14.1 [INFO] [stderr] Compiling cc v1.0.35 [INFO] [stderr] Compiling openssl-src v111.12.0+1.1.1h [INFO] [stderr] Compiling openssl-sys v0.9.65 [INFO] [stderr] Compiling libz-sys v1.1.2 [INFO] [stderr] Compiling lzma-sys v0.1.17 [INFO] [stderr] Compiling bzip2-sys v0.1.9+1.0.8 [INFO] [stderr] Compiling curl-sys v0.4.36+curl-7.71.1 [INFO] [stderr] Compiling backtrace-sys v0.1.28 [INFO] [stderr] Compiling hts-sys v2.0.1 [INFO] [stderr] Compiling thiserror-impl v1.0.21 [INFO] [stderr] Compiling strum_macros v0.20.1 [INFO] [stderr] Compiling derive-new v0.5.8 [INFO] [stderr] Compiling indoc-impl v0.3.6 [INFO] [stderr] Compiling enum-map-derive v0.4.6 [INFO] [stderr] Compiling getset v0.0.9 [INFO] [stderr] Checking indoc v0.3.6 [INFO] [stderr] Checking failure v0.1.5 [INFO] [stderr] Compiling pyo3-macros v0.14.1 [INFO] [stderr] Checking enum-map v0.6.4 [INFO] [stderr] Checking thiserror v1.0.21 [INFO] [stderr] Checking bio-types v0.12.0 [INFO] [stderr] Checking nalgebra v0.26.2 [INFO] [stderr] Checking bstr v0.2.15 [INFO] [stderr] Checking vec_map v0.8.1 [INFO] [stderr] Checking multimap v0.8.3 [INFO] [stderr] Checking csv v1.1.6 [INFO] [stderr] Checking statrs v0.14.0 [INFO] [stderr] Checking rust-htslib v0.38.2 [INFO] [stderr] Checking mbf_bam v0.3.0 (/opt/rustwide/workdir) [INFO] [stdout] error: non-local `impl` definition, they should be avoided as they go against expectation [INFO] [stdout] --> src/lib.rs:19:17 [INFO] [stdout] | [INFO] [stdout] 19 | #[derive(Debug, Fail, Clone)] [INFO] [stdout] | ^^^^ [INFO] [stdout] | [INFO] [stdout] = help: move this `impl` block outside the of the current constant `_DERIVE_failure_Fail_FOR_BamError` [INFO] [stdout] = note: an `impl` definition is non-local if it is nested inside an item and neither the type nor the trait are at the same nesting level as the `impl` block [INFO] [stdout] = note: this lint may become deny-by-default in the edition 2024 and higher, see the tracking issue [INFO] [stdout] = note: requested on the command line with `-D non-local-definitions` [INFO] [stdout] = note: this error originates in the derive macro `Fail` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: non-local `impl` definition, they should be avoided as they go against expectation [INFO] [stdout] --> src/lib.rs:19:17 [INFO] [stdout] | [INFO] [stdout] 19 | #[derive(Debug, Fail, Clone)] [INFO] [stdout] | ^^^^ [INFO] [stdout] | [INFO] [stdout] = help: move this `impl` block outside the of the current constant `_DERIVE_failure_core_fmt_Display_FOR_BamError` [INFO] [stdout] = note: an `impl` definition is non-local if it is nested inside an item and neither the type nor the trait are at the same nesting level as the `impl` block [INFO] [stdout] = note: this lint may become deny-by-default in the edition 2024 and higher, see the tracking issue [INFO] [stdout] = note: this error originates in the derive macro `Fail` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to 2 previous errors [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] error: could not compile `mbf_bam` (lib) due to 3 previous errors [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stdout] error: non-local `impl` definition, they should be avoided as they go against expectation [INFO] [stdout] --> src/lib.rs:19:17 [INFO] [stdout] | [INFO] [stdout] 19 | #[derive(Debug, Fail, Clone)] [INFO] [stdout] | ^^^^ [INFO] [stdout] | [INFO] [stdout] = help: move this `impl` block outside the of the current constant `_DERIVE_failure_Fail_FOR_BamError` [INFO] [stdout] = note: an `impl` definition is non-local if it is nested inside an item and neither the type nor the trait are at the same nesting level as the `impl` block [INFO] [stdout] = note: this lint may become deny-by-default in the edition 2024 and higher, see the tracking issue [INFO] [stdout] = note: requested on the command line with `-D non-local-definitions` [INFO] [stdout] = note: this error originates in the derive macro `Fail` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: non-local `impl` definition, they should be avoided as they go against expectation [INFO] [stdout] --> src/lib.rs:19:17 [INFO] [stdout] | [INFO] [stdout] 19 | #[derive(Debug, Fail, Clone)] [INFO] [stdout] | ^^^^ [INFO] [stdout] | [INFO] [stdout] = help: move this `impl` block outside the of the current constant `_DERIVE_failure_core_fmt_Display_FOR_BamError` [INFO] [stdout] = note: an `impl` definition is non-local if it is nested inside an item and neither the type nor the trait are at the same nesting level as the `impl` block [INFO] [stdout] = note: this lint may become deny-by-default in the edition 2024 and higher, see the tracking issue [INFO] [stdout] = note: this error originates in the derive macro `Fail` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to 2 previous errors [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] error: could not compile `mbf_bam` (lib test) due to 3 previous errors [INFO] running `Command { std: "docker" "inspect" "6373254bb161ddc06e66a232e92381968cf399da5661cc037d048e39fb4eb7d5", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "6373254bb161ddc06e66a232e92381968cf399da5661cc037d048e39fb4eb7d5", kill_on_drop: false }` [INFO] [stdout] 6373254bb161ddc06e66a232e92381968cf399da5661cc037d048e39fb4eb7d5