[INFO] cloning repository https://github.com/p-sud/gembs-to-bismark-bed-converter
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/p-sud/gembs-to-bismark-bed-converter" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fp-sud%2Fgembs-to-bismark-bed-converter", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fp-sud%2Fgembs-to-bismark-bed-converter'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 253b463673014677fc8ef6392643d036966fab89
[INFO] checking p-sud/gembs-to-bismark-bed-converter against master#5518eaa946291f00471af8b254b2a1715f234882 for pr-120393-1
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fp-sud%2Fgembs-to-bismark-bed-converter" "/workspace/builds/worker-3-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-3-tc1/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/p-sud/gembs-to-bismark-bed-converter on toolchain 5518eaa946291f00471af8b254b2a1715f234882
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+5518eaa946291f00471af8b254b2a1715f234882" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/p-sud/gembs-to-bismark-bed-converter
[INFO] finished tweaking git repo https://github.com/p-sud/gembs-to-bismark-bed-converter
[INFO] tweaked toml for git repo https://github.com/p-sud/gembs-to-bismark-bed-converter written to /workspace/builds/worker-3-tc1/source/Cargo.toml
[INFO] crate git repo https://github.com/p-sud/gembs-to-bismark-bed-converter already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+5518eaa946291f00471af8b254b2a1715f234882" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded structopt-derive v0.4.0
[INFO] [stderr]   Downloaded proc-macro-error-attr v0.4.3
[INFO] [stderr]   Downloaded rustversion v1.0.1
[INFO] [stderr]   Downloaded syn-mid v0.4.0
[INFO] [stderr]   Downloaded structopt v0.3.7
[INFO] [stderr]   Downloaded syn v1.0.13
[INFO] [stderr]   Downloaded csv v1.1.2
[INFO] [stderr]   Downloaded proc-macro-error v0.4.4
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+5518eaa946291f00471af8b254b2a1715f234882" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 9a28f5772eb0a7e1f16a6842a03debb73fa131badd23d9fa7bf43dbb846e44a1
[INFO] running `Command { std: "docker" "start" "-a" "9a28f5772eb0a7e1f16a6842a03debb73fa131badd23d9fa7bf43dbb846e44a1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "9a28f5772eb0a7e1f16a6842a03debb73fa131badd23d9fa7bf43dbb846e44a1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "9a28f5772eb0a7e1f16a6842a03debb73fa131badd23d9fa7bf43dbb846e44a1", kill_on_drop: false }`
[INFO] [stdout] 9a28f5772eb0a7e1f16a6842a03debb73fa131badd23d9fa7bf43dbb846e44a1
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+5518eaa946291f00471af8b254b2a1715f234882" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 5de63ecd3f0aa78183f4c3cbb311f524df9ad6ffc0c684c461df49a805752137
[INFO] running `Command { std: "docker" "start" "-a" "5de63ecd3f0aa78183f4c3cbb311f524df9ad6ffc0c684c461df49a805752137", kill_on_drop: false }`
[INFO] [stderr]    Compiling syn v1.0.13
[INFO] [stderr]    Compiling byteorder v1.3.2
[INFO] [stderr]    Compiling memchr v2.2.1
[INFO] [stderr]    Compiling unicode-segmentation v1.6.0
[INFO] [stderr]     Checking atty v0.2.14
[INFO] [stderr]     Checking clap v2.33.0
[INFO] [stderr]    Compiling heck v0.3.1
[INFO] [stderr]     Checking regex-automata v0.1.8
[INFO] [stderr]     Checking csv-core v0.1.6
[INFO] [stderr]    Compiling syn-mid v0.4.0
[INFO] [stderr]    Compiling rustversion v1.0.1
[INFO] [stderr]    Compiling serde_derive v1.0.104
[INFO] [stderr]    Compiling proc-macro-error v0.4.4
[INFO] [stderr]    Compiling proc-macro-error-attr v0.4.3
[INFO] [stderr]    Compiling structopt-derive v0.4.0
[INFO] [stderr]     Checking structopt v0.3.7
[INFO] [stderr]     Checking serde v1.0.104
[INFO] [stderr]     Checking bstr v0.2.8
[INFO] [stderr]     Checking csv v1.1.2
[INFO] [stderr]     Checking gembs-to-bismark-bed-converter v0.1.0 (/opt/rustwide/workdir)
[INFO] [stdout] warning: fields `reference_call`, `genotype_call`, `flags`, `methylation_estimate`, `total_bases_supporting_call`, and `total_bases` are never read
[INFO] [stdout]   --> src/main.rs:24:5
[INFO] [stdout]    |
[INFO] [stdout] 16 | struct Row {
[INFO] [stdout]    |        --- fields in this struct
[INFO] [stdout] ...
[INFO] [stdout] 24 |     reference_call: String,
[INFO] [stdout]    |     ^^^^^^^^^^^^^^
[INFO] [stdout] 25 |     #[serde(skip)]
[INFO] [stdout] 26 |     genotype_call: String,
[INFO] [stdout]    |     ^^^^^^^^^^^^^
[INFO] [stdout] 27 |     #[serde(skip)]
[INFO] [stdout] 28 |     flags: String,
[INFO] [stdout]    |     ^^^^^
[INFO] [stdout] 29 |     #[serde(skip)]
[INFO] [stdout] 30 |     methylation_estimate: String,
[INFO] [stdout]    |     ^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] ...
[INFO] [stdout] 35 |     total_bases_supporting_call: u16,
[INFO] [stdout]    |     ^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] ...
[INFO] [stdout] 39 |     total_bases: u16,
[INFO] [stdout]    |     ^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `Row` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis
[INFO] [stdout]    = note: `#[warn(dead_code)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: fields `reference_call`, `genotype_call`, `flags`, `methylation_estimate`, `total_bases_supporting_call`, and `total_bases` are never read
[INFO] [stdout]   --> src/main.rs:24:5
[INFO] [stdout]    |
[INFO] [stdout] 16 | struct Row {
[INFO] [stdout]    |        --- fields in this struct
[INFO] [stdout] ...
[INFO] [stdout] 24 |     reference_call: String,
[INFO] [stdout]    |     ^^^^^^^^^^^^^^
[INFO] [stdout] 25 |     #[serde(skip)]
[INFO] [stdout] 26 |     genotype_call: String,
[INFO] [stdout]    |     ^^^^^^^^^^^^^
[INFO] [stdout] 27 |     #[serde(skip)]
[INFO] [stdout] 28 |     flags: String,
[INFO] [stdout]    |     ^^^^^
[INFO] [stdout] 29 |     #[serde(skip)]
[INFO] [stdout] 30 |     methylation_estimate: String,
[INFO] [stdout]    |     ^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] ...
[INFO] [stdout] 35 |     total_bases_supporting_call: u16,
[INFO] [stdout]    |     ^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] ...
[INFO] [stdout] 39 |     total_bases: u16,
[INFO] [stdout]    |     ^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `Row` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis
[INFO] [stdout]    = note: `#[warn(dead_code)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 1 warning emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 1 warning emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 15.15s
[INFO] running `Command { std: "docker" "inspect" "5de63ecd3f0aa78183f4c3cbb311f524df9ad6ffc0c684c461df49a805752137", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "5de63ecd3f0aa78183f4c3cbb311f524df9ad6ffc0c684c461df49a805752137", kill_on_drop: false }`
[INFO] [stdout] 5de63ecd3f0aa78183f4c3cbb311f524df9ad6ffc0c684c461df49a805752137
[INFO] checking p-sud/gembs-to-bismark-bed-converter against try#7622c0f807a4e13c4db886a1681bf343795692df+rustflags=-Dnon_local_definitions for pr-120393-1
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fp-sud%2Fgembs-to-bismark-bed-converter" "/workspace/builds/worker-3-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-3-tc2/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/p-sud/gembs-to-bismark-bed-converter on toolchain 7622c0f807a4e13c4db886a1681bf343795692df
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+7622c0f807a4e13c4db886a1681bf343795692df" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/p-sud/gembs-to-bismark-bed-converter
[INFO] finished tweaking git repo https://github.com/p-sud/gembs-to-bismark-bed-converter
[INFO] tweaked toml for git repo https://github.com/p-sud/gembs-to-bismark-bed-converter written to /workspace/builds/worker-3-tc2/source/Cargo.toml
[INFO] crate git repo https://github.com/p-sud/gembs-to-bismark-bed-converter already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+7622c0f807a4e13c4db886a1681bf343795692df" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+7622c0f807a4e13c4db886a1681bf343795692df" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 337badc320caab4e0b0be4bef7cc9bd520f7fbee8133230e7b717ec984ae399f
[INFO] running `Command { std: "docker" "start" "-a" "337badc320caab4e0b0be4bef7cc9bd520f7fbee8133230e7b717ec984ae399f", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "337badc320caab4e0b0be4bef7cc9bd520f7fbee8133230e7b717ec984ae399f", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "337badc320caab4e0b0be4bef7cc9bd520f7fbee8133230e7b717ec984ae399f", kill_on_drop: false }`
[INFO] [stdout] 337badc320caab4e0b0be4bef7cc9bd520f7fbee8133230e7b717ec984ae399f
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid -Dnon_local_definitions" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+7622c0f807a4e13c4db886a1681bf343795692df" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 51f9df0db62fce35928407dac98f05e4bf735eabcb7f7bf24ab8ba7fdf891ccb
[INFO] running `Command { std: "docker" "start" "-a" "51f9df0db62fce35928407dac98f05e4bf735eabcb7f7bf24ab8ba7fdf891ccb", kill_on_drop: false }`
[INFO] [stderr]    Compiling syn v1.0.13
[INFO] [stderr]    Compiling memchr v2.2.1
[INFO] [stderr]    Compiling byteorder v1.3.2
[INFO] [stderr]    Compiling unicode-segmentation v1.6.0
[INFO] [stderr]     Checking atty v0.2.14
[INFO] [stderr]     Checking clap v2.33.0
[INFO] [stderr]    Compiling heck v0.3.1
[INFO] [stderr]     Checking regex-automata v0.1.8
[INFO] [stderr]     Checking csv-core v0.1.6
[INFO] [stderr]    Compiling syn-mid v0.4.0
[INFO] [stderr]    Compiling rustversion v1.0.1
[INFO] [stderr]    Compiling serde_derive v1.0.104
[INFO] [stderr]    Compiling proc-macro-error v0.4.4
[INFO] [stderr]    Compiling proc-macro-error-attr v0.4.3
[INFO] [stderr]    Compiling structopt-derive v0.4.0
[INFO] [stderr]     Checking structopt v0.3.7
[INFO] [stderr]     Checking serde v1.0.104
[INFO] [stderr]     Checking bstr v0.2.8
[INFO] [stderr]     Checking csv v1.1.2
[INFO] [stderr]     Checking gembs-to-bismark-bed-converter v0.1.0 (/opt/rustwide/workdir)
[INFO] [stdout] warning: fields `reference_call`, `genotype_call`, `flags`, `methylation_estimate`, `total_bases_supporting_call`, and `total_bases` are never read
[INFO] [stdout]   --> src/main.rs:24:5
[INFO] [stdout]    |
[INFO] [stdout] 16 | struct Row {
[INFO] [stdout]    |        --- fields in this struct
[INFO] [stdout] ...
[INFO] [stdout] 24 |     reference_call: String,
[INFO] [stdout]    |     ^^^^^^^^^^^^^^
[INFO] [stdout] 25 |     #[serde(skip)]
[INFO] [stdout] 26 |     genotype_call: String,
[INFO] [stdout]    |     ^^^^^^^^^^^^^
[INFO] [stdout] 27 |     #[serde(skip)]
[INFO] [stdout] 28 |     flags: String,
[INFO] [stdout]    |     ^^^^^
[INFO] [stdout] 29 |     #[serde(skip)]
[INFO] [stdout] 30 |     methylation_estimate: String,
[INFO] [stdout]    |     ^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] ...
[INFO] [stdout] 35 |     total_bases_supporting_call: u16,
[INFO] [stdout]    |     ^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] ...
[INFO] [stdout] 39 |     total_bases: u16,
[INFO] [stdout]    |     ^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `Row` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis
[INFO] [stdout]    = note: `#[warn(dead_code)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: non-local `impl` definition, they should be avoided as they go against expectation
[INFO] [stdout]   --> src/main.rs:15:17
[INFO] [stdout]    |
[INFO] [stdout] 15 | #[derive(Debug, Deserialize, Serialize)]
[INFO] [stdout]    |                 ^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = help: move this `impl` block outside the of the current constant `_IMPL_DESERIALIZE_FOR_Row`
[INFO] [stdout]    = note: an `impl` definition is non-local if it is nested inside an item and neither the type nor the trait are at the same nesting level as the `impl` block
[INFO] [stdout]    = note: this lint may become deny-by-default in the edition 2024 and higher, see the tracking issue <https://github.com/rust-lang/rust/issues/120363>
[INFO] [stdout]    = note: requested on the command line with `-D non-local-definitions`
[INFO] [stdout]    = note: this error originates in the derive macro `Deserialize` (in Nightly builds, run with -Z macro-backtrace for more info)
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: non-local `impl` definition, they should be avoided as they go against expectation
[INFO] [stdout]   --> src/main.rs:15:30
[INFO] [stdout]    |
[INFO] [stdout] 15 | #[derive(Debug, Deserialize, Serialize)]
[INFO] [stdout]    |                              ^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = help: move this `impl` block outside the of the current constant `_IMPL_SERIALIZE_FOR_Row`
[INFO] [stdout]    = note: an `impl` definition is non-local if it is nested inside an item and neither the type nor the trait are at the same nesting level as the `impl` block
[INFO] [stdout]    = note: this lint may become deny-by-default in the edition 2024 and higher, see the tracking issue <https://github.com/rust-lang/rust/issues/120363>
[INFO] [stdout]    = note: this error originates in the derive macro `Serialize` (in Nightly builds, run with -Z macro-backtrace for more info)
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: aborting due to 2 previous errors; 1 warning emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr] error: could not compile `gembs-to-bismark-bed-converter` (bin "gembs-to-bismark-bed-converter") due to 3 previous errors; 1 warning emitted
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] [stdout] warning: fields `reference_call`, `genotype_call`, `flags`, `methylation_estimate`, `total_bases_supporting_call`, and `total_bases` are never read
[INFO] [stdout]   --> src/main.rs:24:5
[INFO] [stdout]    |
[INFO] [stdout] 16 | struct Row {
[INFO] [stdout]    |        --- fields in this struct
[INFO] [stdout] ...
[INFO] [stdout] 24 |     reference_call: String,
[INFO] [stdout]    |     ^^^^^^^^^^^^^^
[INFO] [stdout] 25 |     #[serde(skip)]
[INFO] [stdout] 26 |     genotype_call: String,
[INFO] [stdout]    |     ^^^^^^^^^^^^^
[INFO] [stdout] 27 |     #[serde(skip)]
[INFO] [stdout] 28 |     flags: String,
[INFO] [stdout]    |     ^^^^^
[INFO] [stdout] 29 |     #[serde(skip)]
[INFO] [stdout] 30 |     methylation_estimate: String,
[INFO] [stdout]    |     ^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] ...
[INFO] [stdout] 35 |     total_bases_supporting_call: u16,
[INFO] [stdout]    |     ^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] ...
[INFO] [stdout] 39 |     total_bases: u16,
[INFO] [stdout]    |     ^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `Row` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis
[INFO] [stdout]    = note: `#[warn(dead_code)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: non-local `impl` definition, they should be avoided as they go against expectation
[INFO] [stdout]   --> src/main.rs:15:17
[INFO] [stdout]    |
[INFO] [stdout] 15 | #[derive(Debug, Deserialize, Serialize)]
[INFO] [stdout]    |                 ^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = help: move this `impl` block outside the of the current constant `_IMPL_DESERIALIZE_FOR_Row`
[INFO] [stdout]    = note: an `impl` definition is non-local if it is nested inside an item and neither the type nor the trait are at the same nesting level as the `impl` block
[INFO] [stdout]    = note: this lint may become deny-by-default in the edition 2024 and higher, see the tracking issue <https://github.com/rust-lang/rust/issues/120363>
[INFO] [stdout]    = note: requested on the command line with `-D non-local-definitions`
[INFO] [stdout]    = note: this error originates in the derive macro `Deserialize` (in Nightly builds, run with -Z macro-backtrace for more info)
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: non-local `impl` definition, they should be avoided as they go against expectation
[INFO] [stdout]   --> src/main.rs:15:30
[INFO] [stdout]    |
[INFO] [stdout] 15 | #[derive(Debug, Deserialize, Serialize)]
[INFO] [stdout]    |                              ^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = help: move this `impl` block outside the of the current constant `_IMPL_SERIALIZE_FOR_Row`
[INFO] [stdout]    = note: an `impl` definition is non-local if it is nested inside an item and neither the type nor the trait are at the same nesting level as the `impl` block
[INFO] [stdout]    = note: this lint may become deny-by-default in the edition 2024 and higher, see the tracking issue <https://github.com/rust-lang/rust/issues/120363>
[INFO] [stdout]    = note: this error originates in the derive macro `Serialize` (in Nightly builds, run with -Z macro-backtrace for more info)
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: aborting due to 2 previous errors; 1 warning emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr] error: could not compile `gembs-to-bismark-bed-converter` (bin "gembs-to-bismark-bed-converter" test) due to 3 previous errors; 1 warning emitted
[INFO] running `Command { std: "docker" "inspect" "51f9df0db62fce35928407dac98f05e4bf735eabcb7f7bf24ab8ba7fdf891ccb", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "51f9df0db62fce35928407dac98f05e4bf735eabcb7f7bf24ab8ba7fdf891ccb", kill_on_drop: false }`
[INFO] [stdout] 51f9df0db62fce35928407dac98f05e4bf735eabcb7f7bf24ab8ba7fdf891ccb