[INFO] fetching crate ska 0.3.5...
[INFO] building ska-0.3.5 against master#d59f06fc64844ec2073e5e888f7470989ef25ff9 for pr-119440
[INFO] extracting crate ska 0.3.5 into /workspace/builds/worker-0-tc1/source
[INFO] validating manifest of crates.io crate ska 0.3.5 on toolchain d59f06fc64844ec2073e5e888f7470989ef25ff9
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+d59f06fc64844ec2073e5e888f7470989ef25ff9" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking crates.io crate ska 0.3.5
[INFO] finished tweaking crates.io crate ska 0.3.5
[INFO] tweaked toml for crates.io crate ska 0.3.5 written to /workspace/builds/worker-0-tc1/source/Cargo.toml
[INFO] crate crates.io crate ska 0.3.5 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+d59f06fc64844ec2073e5e888f7470989ef25ff9" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded slog-json v2.6.1
[INFO] [stderr]   Downloaded snapbox v0.4.14
[INFO] [stderr]   Downloaded assert_fs v1.0.13
[INFO] [stderr]   Downloaded snapbox-macros v0.3.6
[INFO] [stderr]   Downloaded slog-async v2.8.0
[INFO] [stderr]   Downloaded slog-term v2.9.0
[INFO] [stderr]   Downloaded snap v1.1.0
[INFO] [stderr]   Downloaded argmin-math v0.3.0
[INFO] [stderr]   Downloaded argmin v0.8.1
[INFO] [stderr]   Downloaded noodles-core v0.9.0
[INFO] [stderr]   Downloaded noodles-csi v0.12.0
[INFO] [stderr]   Downloaded noodles-tabix v0.15.0
[INFO] [stderr]   Downloaded noodles-bgzf v0.18.0
[INFO] [stderr]   Downloaded noodles-vcf v0.22.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+d59f06fc64844ec2073e5e888f7470989ef25ff9" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 15a3ce9931b2e6c627e7b7cee2bbe35784403839d116b18d30ad6a1073ac4405
[INFO] running `Command { std: "docker" "start" "-a" "15a3ce9931b2e6c627e7b7cee2bbe35784403839d116b18d30ad6a1073ac4405", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "15a3ce9931b2e6c627e7b7cee2bbe35784403839d116b18d30ad6a1073ac4405", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "15a3ce9931b2e6c627e7b7cee2bbe35784403839d116b18d30ad6a1073ac4405", kill_on_drop: false }`
[INFO] [stdout] 15a3ce9931b2e6c627e7b7cee2bbe35784403839d116b18d30ad6a1073ac4405
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+d59f06fc64844ec2073e5e888f7470989ef25ff9" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 15e97dc16518b056141904728477b56f82335e2550901f78aa6453adb18839dc
[INFO] running `Command { std: "docker" "start" "-a" "15e97dc16518b056141904728477b56f82335e2550901f78aa6453adb18839dc", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.150
[INFO] [stderr]    Compiling proc-macro2 v1.0.69
[INFO] [stderr]    Compiling serde v1.0.193
[INFO] [stderr]    Compiling once_cell v1.18.0
[INFO] [stderr]    Compiling memchr v2.6.4
[INFO] [stderr]    Compiling time-core v0.1.2
[INFO] [stderr]    Compiling slog v2.7.0
[INFO] [stderr]    Compiling num-traits v0.2.17
[INFO] [stderr]    Compiling ahash v0.7.7
[INFO] [stderr]    Compiling powerfmt v0.2.0
[INFO] [stderr]    Compiling flate2 v1.0.28
[INFO] [stderr]    Compiling num_threads v0.1.6
[INFO] [stderr]    Compiling rustix v0.38.25
[INFO] [stderr]    Compiling indexmap v1.9.3
[INFO] [stderr]    Compiling linux-raw-sys v0.4.11
[INFO] [stderr]    Compiling time-macros v0.2.15
[INFO] [stderr]    Compiling deranged v0.3.9
[INFO] [stderr]    Compiling anyhow v1.0.75
[INFO] [stderr]    Compiling thiserror v1.0.50
[INFO] [stderr]    Compiling anstyle-parse v0.2.2
[INFO] [stderr]    Compiling thread_local v1.1.7
[INFO] [stderr]    Compiling rayon-core v1.12.0
[INFO] [stderr]    Compiling noodles-bgzf v0.18.0
[INFO] [stderr]    Compiling matrixmultiply v0.3.8
[INFO] [stderr]    Compiling bit-vec v0.6.3
[INFO] [stderr]    Compiling paste v1.0.14
[INFO] [stderr]    Compiling anstyle v1.0.4
[INFO] [stderr]    Compiling noodles-core v0.9.0
[INFO] [stderr]    Compiling portable-atomic v1.5.1
[INFO] [stderr]    Compiling slog-async v2.8.0
[INFO] [stderr]    Compiling quote v1.0.33
[INFO] [stderr]    Compiling anstream v0.6.4
[INFO] [stderr]    Compiling rayon v1.8.0
[INFO] [stderr]    Compiling noodles-csi v0.12.0
[INFO] [stderr]    Compiling syn v2.0.39
[INFO] [stderr]    Compiling getrandom v0.2.11
[INFO] [stderr]    Compiling dirs-sys-next v0.1.2
[INFO] [stderr]    Compiling atty v0.2.14
[INFO] [stderr]    Compiling cc v1.0.83
[INFO] [stderr]    Compiling aho-corasick v1.1.2
[INFO] [stderr]    Compiling ahash v0.8.6
[INFO] [stderr]    Compiling dirs-next v2.0.0
[INFO] [stderr]    Compiling is-terminal v0.4.9
[INFO] [stderr]    Compiling rawpointer v0.2.1
[INFO] [stderr]    Compiling regex-syntax v0.8.2
[INFO] [stderr]    Compiling term v0.7.0
[INFO] [stderr]    Compiling ciborium-io v0.2.1
[INFO] [stderr]    Compiling hashbrown v0.12.3
[INFO] [stderr]    Compiling snap v1.1.0
[INFO] [stderr]    Compiling clap_lex v0.6.0
[INFO] [stderr]    Compiling half v1.8.2
[INFO] [stderr]    Compiling num-integer v0.1.45
[INFO] [stderr]    Compiling num-complex v0.4.4
[INFO] [stderr]    Compiling safemem v0.3.3
[INFO] [stderr]    Compiling unicode-width v0.1.11
[INFO] [stderr]    Compiling take_mut v0.2.2
[INFO] [stderr]    Compiling libm v0.2.8
[INFO] [stderr]    Compiling clap_builder v4.4.8
[INFO] [stderr]    Compiling console v0.15.7
[INFO] [stderr]    Compiling nom v7.1.3
[INFO] [stderr]    Compiling ciborium-ll v0.2.1
[INFO] [stderr]    Compiling buf_redux v0.8.4
[INFO] [stderr]    Compiling time v0.3.30
[INFO] [stderr]    Compiling colored v2.0.4
[INFO] [stderr]    Compiling instant v0.1.12
[INFO] [stderr]    Compiling noodles-tabix v0.15.0
[INFO] [stderr]    Compiling zerocopy v0.7.26
[INFO] [stderr]    Compiling bytecount v0.6.7
[INFO] [stderr]    Compiling bzip2-sys v0.1.11+1.0.8
[INFO] [stderr]    Compiling lzma-sys v0.1.20
[INFO] [stderr]    Compiling num_cpus v1.16.0
[INFO] [stderr]    Compiling indicatif v0.17.7
[INFO] [stderr]    Compiling xz2 v0.1.7
[INFO] [stderr]    Compiling slog-term v2.9.0
[INFO] [stderr]    Compiling regex-automata v0.4.3
[INFO] [stderr]    Compiling simple_logger v4.2.0
[INFO] [stderr]    Compiling noodles-vcf v0.22.0
[INFO] [stderr]    Compiling bzip2 v0.4.4
[INFO] [stderr]    Compiling needletail v0.4.1
[INFO] [stderr]    Compiling serde_derive v1.0.193
[INFO] [stderr]    Compiling thiserror-impl v1.0.50
[INFO] [stderr]    Compiling clap_derive v4.4.7
[INFO] [stderr]    Compiling regex v1.10.2
[INFO] [stderr]    Compiling clap v4.4.8
[INFO] [stderr]    Compiling rand_core v0.6.4
[INFO] [stderr]    Compiling serde_json v1.0.108
[INFO] [stderr]    Compiling bincode v1.3.3
[INFO] [stderr]    Compiling ndarray v0.15.6
[INFO] [stderr]    Compiling ciborium v0.2.1
[INFO] [stderr]    Compiling rand_chacha v0.3.1
[INFO] [stderr]    Compiling rand_xoshiro v0.6.0
[INFO] [stderr]    Compiling rand v0.8.5
[INFO] [stderr]    Compiling slog-json v2.6.1
[INFO] [stderr]    Compiling argmin-math v0.3.0
[INFO] [stderr]    Compiling argmin v0.8.1
[INFO] [stderr]    Compiling ska v0.3.5 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 16.89s
[INFO] [stderr] warning: the following packages contain code that will be rejected by a future version of Rust: buf_redux v0.8.4
[INFO] [stderr] note: to see what the problems were, use the option `--future-incompat-report`, or run `cargo report future-incompatibilities --id 1`
[INFO] running `Command { std: "docker" "inspect" "15e97dc16518b056141904728477b56f82335e2550901f78aa6453adb18839dc", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "15e97dc16518b056141904728477b56f82335e2550901f78aa6453adb18839dc", kill_on_drop: false }`
[INFO] [stdout] 15e97dc16518b056141904728477b56f82335e2550901f78aa6453adb18839dc
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+d59f06fc64844ec2073e5e888f7470989ef25ff9" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 7b3dca8a03153c2f1f1dc45f7af96dff6e60306a3eedce1bdc4ca5eb7bb4933f
[INFO] running `Command { std: "docker" "start" "-a" "7b3dca8a03153c2f1f1dc45f7af96dff6e60306a3eedce1bdc4ca5eb7bb4933f", kill_on_drop: false }`
[INFO] [stderr]    Compiling either v1.9.0
[INFO] [stderr]    Compiling rustix v0.38.25
[INFO] [stderr]    Compiling bstr v1.8.0
[INFO] [stderr]    Compiling predicates-core v1.0.6
[INFO] [stderr]    Compiling walkdir v2.4.0
[INFO] [stderr]    Compiling doc-comment v0.3.3
[INFO] [stderr]    Compiling difflib v0.4.0
[INFO] [stderr]    Compiling fastrand v2.0.1
[INFO] [stderr]    Compiling termtree v0.4.1
[INFO] [stderr]    Compiling snapbox-macros v0.3.6
[INFO] [stderr]    Compiling float-cmp v0.9.0
[INFO] [stderr]    Compiling diff v0.1.13
[INFO] [stderr]    Compiling similar v2.3.0
[INFO] [stderr]    Compiling predicates-tree v1.0.9
[INFO] [stderr]    Compiling pretty_assertions v1.4.0
[INFO] [stderr]    Compiling rayon v1.8.0
[INFO] [stderr]    Compiling itertools v0.11.0
[INFO] [stderr]    Compiling itertools v0.10.5
[INFO] [stderr]    Compiling globset v0.4.13
[INFO] [stderr]    Compiling snapbox v0.4.14
[INFO] [stderr]    Compiling ignore v0.4.20
[INFO] [stderr]    Compiling globwalk v0.8.1
[INFO] [stderr]    Compiling predicates v2.1.5
[INFO] [stderr]    Compiling predicates v3.0.4
[INFO] [stderr]    Compiling indicatif v0.17.7
[INFO] [stderr]    Compiling ndarray v0.15.6
[INFO] [stderr]    Compiling is-terminal v0.4.9
[INFO] [stderr]    Compiling tempfile v3.8.1
[INFO] [stderr]    Compiling colored v2.0.4
[INFO] [stderr]    Compiling simple_logger v4.2.0
[INFO] [stderr]    Compiling assert_fs v1.0.13
[INFO] [stderr]    Compiling ska v0.3.5 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 9.50s
[INFO] [stderr] warning: the following packages contain code that will be rejected by a future version of Rust: buf_redux v0.8.4
[INFO] [stderr] note: to see what the problems were, use the option `--future-incompat-report`, or run `cargo report future-incompatibilities --id 1`
[INFO] running `Command { std: "docker" "inspect" "7b3dca8a03153c2f1f1dc45f7af96dff6e60306a3eedce1bdc4ca5eb7bb4933f", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "7b3dca8a03153c2f1f1dc45f7af96dff6e60306a3eedce1bdc4ca5eb7bb4933f", kill_on_drop: false }`
[INFO] [stdout] 7b3dca8a03153c2f1f1dc45f7af96dff6e60306a3eedce1bdc4ca5eb7bb4933f