[INFO] cloning repository https://github.com/langmead-lab/bbwt
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/langmead-lab/bbwt" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Flangmead-lab%2Fbbwt", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Flangmead-lab%2Fbbwt'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] d2d26e6884efbff2d47a6384cce695d99672f7d8
[INFO] checking langmead-lab/bbwt against master#6f40082313d8374bdf962aba943a712d5322fae6 for pr-117967
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Flangmead-lab%2Fbbwt" "/workspace/builds/worker-6-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-6-tc1/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/langmead-lab/bbwt on toolchain 6f40082313d8374bdf962aba943a712d5322fae6
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+6f40082313d8374bdf962aba943a712d5322fae6" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/langmead-lab/bbwt
[INFO] finished tweaking git repo https://github.com/langmead-lab/bbwt
[INFO] tweaked toml for git repo https://github.com/langmead-lab/bbwt written to /workspace/builds/worker-6-tc1/source/Cargo.toml
[INFO] crate git repo https://github.com/langmead-lab/bbwt already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+6f40082313d8374bdf962aba943a712d5322fae6" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]     Blocking waiting for file lock on package cache
[ERROR] error running command: no output for 300 seconds
[ERROR] this task or one of its parent failed!
[ERROR] no output for 300 seconds
[ERROR] note: run with `RUST_BACKTRACE=1` to display a backtrace.
[INFO] checking langmead-lab/bbwt against try#57fd74335bb14b59b719dc3cc5bc4257e73f33ce for pr-117967
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Flangmead-lab%2Fbbwt" "/workspace/builds/worker-6-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-6-tc2/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/langmead-lab/bbwt on toolchain 57fd74335bb14b59b719dc3cc5bc4257e73f33ce
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+57fd74335bb14b59b719dc3cc5bc4257e73f33ce" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/langmead-lab/bbwt
[INFO] finished tweaking git repo https://github.com/langmead-lab/bbwt
[INFO] tweaked toml for git repo https://github.com/langmead-lab/bbwt written to /workspace/builds/worker-6-tc2/source/Cargo.toml
[INFO] crate git repo https://github.com/langmead-lab/bbwt already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+57fd74335bb14b59b719dc3cc5bc4257e73f33ce" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[ERROR] error running command: no output for 300 seconds
[INFO] checking langmead-lab/bbwt against try#57fd74335bb14b59b719dc3cc5bc4257e73f33ce for pr-117967
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Flangmead-lab%2Fbbwt" "/workspace/builds/worker-6-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-6-tc2/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/langmead-lab/bbwt on toolchain 57fd74335bb14b59b719dc3cc5bc4257e73f33ce
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+57fd74335bb14b59b719dc3cc5bc4257e73f33ce" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/langmead-lab/bbwt
[INFO] finished tweaking git repo https://github.com/langmead-lab/bbwt
[INFO] tweaked toml for git repo https://github.com/langmead-lab/bbwt written to /workspace/builds/worker-6-tc2/source/Cargo.toml
[INFO] crate git repo https://github.com/langmead-lab/bbwt already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+57fd74335bb14b59b719dc3cc5bc4257e73f33ce" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded seq_io v0.3.2
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+57fd74335bb14b59b719dc3cc5bc4257e73f33ce" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] f52a2188745825ae275709f374486a8eaba67a2994454ca42051fd770dc79623
[INFO] running `Command { std: "docker" "start" "-a" "f52a2188745825ae275709f374486a8eaba67a2994454ca42051fd770dc79623", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "f52a2188745825ae275709f374486a8eaba67a2994454ca42051fd770dc79623", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "f52a2188745825ae275709f374486a8eaba67a2994454ca42051fd770dc79623", kill_on_drop: false }`
[INFO] [stdout] f52a2188745825ae275709f374486a8eaba67a2994454ca42051fd770dc79623
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+57fd74335bb14b59b719dc3cc5bc4257e73f33ce" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 0b161c7d99e7259bf30c25beddddec1394ad23909971708e891604c4c92ab045
[INFO] running `Command { std: "docker" "start" "-a" "0b161c7d99e7259bf30c25beddddec1394ad23909971708e891604c4c92ab045", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.150
[INFO] [stderr]    Compiling proc-macro2 v1.0.69
[INFO] [stderr]    Compiling unicode-ident v1.0.12
[INFO] [stderr]    Compiling memchr v2.5.0
[INFO] [stderr]     Checking cfg-if v1.0.0
[INFO] [stderr]    Compiling version_check v0.9.4
[INFO] [stderr]    Compiling crossbeam-utils v0.8.16
[INFO] [stderr]    Compiling serde v1.0.193
[INFO] [stderr]     Checking safemem v0.3.3
[INFO] [stderr]     Checking scoped_threadpool v0.1.9
[INFO] [stderr]     Checking zerocopy v0.7.26
[INFO] [stderr]     Checking once_cell v1.18.0
[INFO] [stderr]     Checking lexopt v0.3.0
[INFO] [stderr]     Checking byteorder v1.5.0
[INFO] [stderr]    Compiling ahash v0.8.6
[INFO] [stderr]     Checking buffer-redux v1.0.0
[INFO] [stderr]    Compiling quote v1.0.33
[INFO] [stderr]    Compiling cc v1.0.83
[INFO] [stderr]     Checking getrandom v0.2.11
[INFO] [stderr]    Compiling syn v2.0.39
[INFO] [stderr]    Compiling bbwt v0.1.0 (/opt/rustwide/workdir)
[INFO] [stderr] warning: bbwt@0.1.0: src/gsa/gsacak.c: In function 'sacak':
[INFO] [stderr] warning: bbwt@0.1.0: src/gsa/gsacak.c:2493:40: warning: comparison of unsigned expression in '< 0' is always false [-Wtype-limits]
[INFO] [stderr] warning: bbwt@0.1.0:  2493 |   if((s == NULL) || (SA == NULL) || (n < 0)) return -1;
[INFO] [stderr] warning: bbwt@0.1.0:       |                                        ^
[INFO] [stderr] warning: bbwt@0.1.0: src/gsa/gsacak.c: In function 'sacak_int':
[INFO] [stderr] warning: bbwt@0.1.0: src/gsa/gsacak.c:2498:40: warning: comparison of unsigned expression in '< 0' is always false [-Wtype-limits]
[INFO] [stderr] warning: bbwt@0.1.0:  2498 |   if((s == NULL) || (SA == NULL) || (n < 0)) return -1;
[INFO] [stderr] warning: bbwt@0.1.0:       |                                        ^
[INFO] [stderr] warning: bbwt@0.1.0: src/gsa/gsacak.c: In function 'gsacak':
[INFO] [stderr] warning: bbwt@0.1.0: src/gsa/gsacak.c:2503:40: warning: comparison of unsigned expression in '< 0' is always false [-Wtype-limits]
[INFO] [stderr] warning: bbwt@0.1.0:  2503 |   if((s == NULL) || (SA == NULL) || (n < 0)) return -1;
[INFO] [stderr] warning: bbwt@0.1.0:       |                                        ^
[INFO] [stderr] warning: bbwt@0.1.0: src/gsa/gsacak.c: In function 'gsacak_int':
[INFO] [stderr] warning: bbwt@0.1.0: src/gsa/gsacak.c:2525:40: warning: comparison of unsigned expression in '< 0' is always false [-Wtype-limits]
[INFO] [stderr] warning: bbwt@0.1.0:  2525 |   if((s == NULL) || (SA == NULL) || (n < 0)) return -1;
[INFO] [stderr] warning: bbwt@0.1.0:       |                                        ^
[INFO] [stderr]    Compiling serde_derive v1.0.193
[INFO] [stderr]     Checking seq_io v0.3.2
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 4.66s
[INFO] running `Command { std: "docker" "inspect" "0b161c7d99e7259bf30c25beddddec1394ad23909971708e891604c4c92ab045", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "0b161c7d99e7259bf30c25beddddec1394ad23909971708e891604c4c92ab045", kill_on_drop: false }`
[INFO] [stdout] 0b161c7d99e7259bf30c25beddddec1394ad23909971708e891604c4c92ab045