[INFO] fetching crate gchemol-readwrite 0.1.10... [INFO] checking gchemol-readwrite-0.1.10 against master#5257aee7dd163d21d32fa904578d4fb0f4c91b79 for pr-116494-2 [INFO] extracting crate gchemol-readwrite 0.1.10 into /workspace/builds/worker-3-tc1/source [INFO] validating manifest of crates.io crate gchemol-readwrite 0.1.10 on toolchain 5257aee7dd163d21d32fa904578d4fb0f4c91b79 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+5257aee7dd163d21d32fa904578d4fb0f4c91b79" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate gchemol-readwrite 0.1.10 [INFO] finished tweaking crates.io crate gchemol-readwrite 0.1.10 [INFO] tweaked toml for crates.io crate gchemol-readwrite 0.1.10 written to /workspace/builds/worker-3-tc1/source/Cargo.toml [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+5257aee7dd163d21d32fa904578d4fb0f4c91b79" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+5257aee7dd163d21d32fa904578d4fb0f4c91b79" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded vecfx v0.1.6 [INFO] [stderr] Downloaded lazy-regex v2.5.0 [INFO] [stderr] Downloaded grep v0.2.13 [INFO] [stderr] Downloaded lazy-regex-proc_macros v2.4.1 [INFO] [stderr] Downloaded handlebars v4.0.1 [INFO] [stderr] Downloaded gchemol-gut v0.4.4 [INFO] [stderr] Downloaded roxmltree v0.18.1 [INFO] [stderr] Downloaded gchemol-graph v0.1.6 [INFO] [stderr] Downloaded envy v0.4.2 [INFO] [stderr] Downloaded gchemol-geometry v0.1.1 [INFO] [stderr] Downloaded gchemol-lattice v0.1.2 [INFO] [stderr] Downloaded gchemol-core v0.1.6 [INFO] [stderr] Downloaded os_pipe v1.1.5 [INFO] [stderr] Downloaded gchemol-neighbors v0.1.3 [INFO] [stderr] Downloaded duct v0.13.7 [INFO] [stderr] Downloaded grep-cli v0.1.10 [INFO] [stderr] Downloaded base64 v0.20.0 [INFO] [stderr] Downloaded grep-printer v0.1.7 [INFO] [stderr] Downloaded grep-regex v0.1.12 [INFO] [stderr] Downloaded grep-matcher v0.1.7 [INFO] [stderr] Downloaded octree v0.1.0 [INFO] [stderr] Downloaded grep-searcher v0.1.13 [INFO] [stderr] Downloaded gchemol-parser v0.4.6 [INFO] [stderr] Downloaded minijinja v1.0.12 [INFO] [stderr] Downloaded shared_child v1.0.0 [INFO] [stderr] Downloaded encoding_rs_io v0.1.7 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+5257aee7dd163d21d32fa904578d4fb0f4c91b79" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 377927b0caeacb9b3a992366bea5fc12a92d5a8d702d0b1cc185889155f4cb9a [INFO] running `Command { std: "docker" "start" "-a" "377927b0caeacb9b3a992366bea5fc12a92d5a8d702d0b1cc185889155f4cb9a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "377927b0caeacb9b3a992366bea5fc12a92d5a8d702d0b1cc185889155f4cb9a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "377927b0caeacb9b3a992366bea5fc12a92d5a8d702d0b1cc185889155f4cb9a", kill_on_drop: false }` [INFO] [stdout] 377927b0caeacb9b3a992366bea5fc12a92d5a8d702d0b1cc185889155f4cb9a [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+5257aee7dd163d21d32fa904578d4fb0f4c91b79" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] cd35dbf92f68039cfe272830de84021dc42fe1339851fe78c11c15f1de53cef2 [INFO] running `Command { std: "docker" "start" "-a" "cd35dbf92f68039cfe272830de84021dc42fe1339851fe78c11c15f1de53cef2", kill_on_drop: false }` [INFO] [stderr] Checking log v0.4.21 [INFO] [stderr] Compiling syn v1.0.109 [INFO] [stderr] Checking hashbrown v0.14.3 [INFO] [stderr] Checking aho-corasick v1.1.2 [INFO] [stderr] Compiling num-traits v0.2.18 [INFO] [stderr] Compiling libc v0.2.153 [INFO] [stderr] Checking bytemuck v1.15.0 [INFO] [stderr] Compiling regex-syntax v0.8.2 [INFO] [stderr] Checking serde v1.0.197 [INFO] [stderr] Compiling ppv-lite86 v0.2.17 [INFO] [stderr] Compiling siphasher v0.3.11 [INFO] [stderr] Checking powerfmt v0.2.0 [INFO] [stderr] Checking winnow v0.5.40 [INFO] [stderr] Compiling anyhow v1.0.81 [INFO] [stderr] Checking clap_builder v4.5.2 [INFO] [stderr] Checking safe_arch v0.7.1 [INFO] [stderr] Compiling phf_shared v0.11.2 [INFO] [stderr] Checking deranged v0.3.11 [INFO] [stderr] Compiling clap_derive v4.5.0 [INFO] [stderr] Checking os_pipe v1.1.5 [INFO] [stderr] Checking wide v0.7.15 [INFO] [stderr] Checking shared_child v1.0.0 [INFO] [stderr] Checking indexmap v2.2.5 [INFO] [stderr] Checking is-terminal v0.4.12 [INFO] [stderr] Checking time-core v0.1.2 [INFO] [stderr] Checking num-conv v0.1.0 [INFO] [stderr] Checking duct v0.13.7 [INFO] [stderr] Checking regex-automata v0.4.6 [INFO] [stderr] Compiling thiserror v1.0.58 [INFO] [stderr] Compiling ucd-trie v0.1.6 [INFO] [stderr] Checking shell-escape v0.1.5 [INFO] [stderr] Checking time v0.3.34 [INFO] [stderr] Compiling phf v0.11.2 [INFO] [stderr] Checking grep-matcher v0.1.7 [INFO] [stderr] Compiling pest v2.7.8 [INFO] [stderr] Checking encoding_rs v0.8.33 [INFO] [stderr] Compiling getrandom v0.2.12 [INFO] [stderr] Compiling indexmap v1.9.3 [INFO] [stderr] Checking unic-common v0.9.0 [INFO] [stderr] Checking unic-char-range v0.9.0 [INFO] [stderr] Checking approx v0.5.1 [INFO] [stderr] Checking num-integer v0.1.46 [INFO] [stderr] Checking unic-ucd-version v0.9.0 [INFO] [stderr] Checking unic-char-property v0.9.0 [INFO] [stderr] Checking hashbrown v0.12.3 [INFO] [stderr] Checking base64 v0.20.0 [INFO] [stderr] Checking num-rational v0.4.1 [INFO] [stderr] Checking unic-ucd-segment v0.9.0 [INFO] [stderr] Checking chrono v0.4.35 [INFO] [stderr] Checking deunicode v1.4.3 [INFO] [stderr] Checking str_indices v0.4.3 [INFO] [stderr] Checking slug v0.1.5 [INFO] [stderr] Checking unic-segment v0.9.0 [INFO] [stderr] Checking ropey v1.6.1 [INFO] [stderr] Checking nom v7.1.3 [INFO] [stderr] Compiling pest_meta v2.7.8 [INFO] [stderr] error: could not compile `pest` (lib) [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/rustup-home/toolchains/5257aee7dd163d21d32fa904578d4fb0f4c91b79/bin/rustc --crate-name pest --edition=2021 /opt/rustwide/cargo-home/registry/src/index.crates.io-6f17d22bba15001f/pest-2.7.8/src/lib.rs --error-format=json --json=diagnostic-rendered-ansi,artifacts,future-incompat --crate-type lib --emit=dep-info,metadata,link -C embed-bitcode=no --cfg 'feature="default"' --cfg 'feature="memchr"' --cfg 'feature="std"' -C metadata=82c9dfdf314ce021 -C extra-filename=-82c9dfdf314ce021 --out-dir /opt/rustwide/target/debug/deps -L dependency=/opt/rustwide/target/debug/deps --extern memchr=/opt/rustwide/target/debug/deps/libmemchr-39436727cf55545f.rmeta --extern thiserror=/opt/rustwide/target/debug/deps/libthiserror-119e348b6ea2f3ea.rmeta --extern ucd_trie=/opt/rustwide/target/debug/deps/libucd_trie-ce6a3fb9e1cd93ee.rmeta --cap-lints allow --cap-lints=forbid` (signal: 9, SIGKILL: kill) [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: could not compile `regex-syntax` (lib) [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/rustup-home/toolchains/5257aee7dd163d21d32fa904578d4fb0f4c91b79/bin/rustc --crate-name regex_syntax --edition=2021 /opt/rustwide/cargo-home/registry/src/index.crates.io-6f17d22bba15001f/regex-syntax-0.8.2/src/lib.rs --error-format=json --json=diagnostic-rendered-ansi,artifacts,future-incompat --crate-type lib --emit=dep-info,metadata,link -C embed-bitcode=no --cfg 'feature="default"' --cfg 'feature="std"' --cfg 'feature="unicode"' --cfg 'feature="unicode-age"' --cfg 'feature="unicode-bool"' --cfg 'feature="unicode-case"' --cfg 'feature="unicode-gencat"' --cfg 'feature="unicode-perl"' --cfg 'feature="unicode-script"' --cfg 'feature="unicode-segment"' -C metadata=57093dc406f0ea76 -C extra-filename=-57093dc406f0ea76 --out-dir /opt/rustwide/target/debug/deps -L dependency=/opt/rustwide/target/debug/deps --cap-lints allow --cap-lints=forbid` (signal: 9, SIGKILL: kill) [INFO] running `Command { std: "docker" "inspect" "cd35dbf92f68039cfe272830de84021dc42fe1339851fe78c11c15f1de53cef2", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "cd35dbf92f68039cfe272830de84021dc42fe1339851fe78c11c15f1de53cef2", kill_on_drop: false }` [INFO] [stdout] cd35dbf92f68039cfe272830de84021dc42fe1339851fe78c11c15f1de53cef2 [INFO] checking gchemol-readwrite-0.1.10 against try#d614ed876e31a5f3ad1d0fbf848fcdab3a29d1d8 for pr-116494-2 [INFO] extracting crate gchemol-readwrite 0.1.10 into /workspace/builds/worker-3-tc2/source [INFO] validating manifest of crates.io crate gchemol-readwrite 0.1.10 on toolchain d614ed876e31a5f3ad1d0fbf848fcdab3a29d1d8 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+d614ed876e31a5f3ad1d0fbf848fcdab3a29d1d8" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate gchemol-readwrite 0.1.10 [INFO] finished tweaking crates.io crate gchemol-readwrite 0.1.10 [INFO] tweaked toml for crates.io crate gchemol-readwrite 0.1.10 written to /workspace/builds/worker-3-tc2/source/Cargo.toml [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+d614ed876e31a5f3ad1d0fbf848fcdab3a29d1d8" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+d614ed876e31a5f3ad1d0fbf848fcdab3a29d1d8" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+d614ed876e31a5f3ad1d0fbf848fcdab3a29d1d8" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] fcf890d349e2e442e041a9a5955241c81e00463fa7bf3b621e18837ece02d4b5 [INFO] running `Command { std: "docker" "start" "-a" "fcf890d349e2e442e041a9a5955241c81e00463fa7bf3b621e18837ece02d4b5", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "fcf890d349e2e442e041a9a5955241c81e00463fa7bf3b621e18837ece02d4b5", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "fcf890d349e2e442e041a9a5955241c81e00463fa7bf3b621e18837ece02d4b5", kill_on_drop: false }` [INFO] [stdout] fcf890d349e2e442e041a9a5955241c81e00463fa7bf3b621e18837ece02d4b5 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+d614ed876e31a5f3ad1d0fbf848fcdab3a29d1d8" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 2d6ced48f90eaba35f1b8d751c082c257f712258191bb5a88047b653cde12392 [INFO] running `Command { std: "docker" "start" "-a" "2d6ced48f90eaba35f1b8d751c082c257f712258191bb5a88047b653cde12392", kill_on_drop: false }` [INFO] [stderr] Checking log v0.4.21 [INFO] [stderr] Compiling syn v1.0.109 [INFO] [stderr] Checking aho-corasick v1.1.2 [INFO] [stderr] Compiling num-traits v0.2.18 [INFO] [stderr] Checking hashbrown v0.14.3 [INFO] [stderr] Compiling libc v0.2.153 [INFO] [stderr] Checking bytemuck v1.15.0 [INFO] [stderr] Compiling regex-syntax v0.8.2 [INFO] [stderr] Checking serde v1.0.197 [INFO] [stderr] Compiling ppv-lite86 v0.2.17 [INFO] [stderr] Compiling siphasher v0.3.11 [INFO] [stderr] Checking powerfmt v0.2.0 [INFO] [stderr] Checking winnow v0.5.40 [INFO] [stderr] Compiling anyhow v1.0.81 [INFO] [stderr] Checking clap_builder v4.5.2 [INFO] [stderr] Compiling phf_shared v0.11.2 [INFO] [stderr] Checking deranged v0.3.11 [INFO] [stderr] Checking safe_arch v0.7.1 [INFO] [stderr] Compiling clap_derive v4.5.0 [INFO] [stderr] Checking shared_child v1.0.0 [INFO] [stderr] Checking is-terminal v0.4.12 [INFO] [stderr] Checking os_pipe v1.1.5 [INFO] [stderr] Checking num-conv v0.1.0 [INFO] [stderr] Checking wide v0.7.15 [INFO] [stderr] Checking time-core v0.1.2 [INFO] [stderr] Checking indexmap v2.2.5 [INFO] [stderr] Checking duct v0.13.7 [INFO] [stderr] Compiling thiserror v1.0.58 [INFO] [stderr] Compiling ucd-trie v0.1.6 [INFO] [stderr] Checking regex-automata v0.4.6 [INFO] [stderr] Checking shell-escape v0.1.5 [INFO] [stderr] Checking time v0.3.34 [INFO] [stderr] Compiling pest v2.7.8 [INFO] [stderr] Compiling phf v0.11.2 [INFO] [stderr] Checking encoding_rs v0.8.33 [INFO] [stderr] Checking grep-matcher v0.1.7 [INFO] [stderr] Compiling getrandom v0.2.12 [INFO] [stderr] Compiling indexmap v1.9.3 [INFO] [stderr] Checking num-integer v0.1.46 [INFO] [stderr] Checking approx v0.5.1 [INFO] [stderr] Checking unic-common v0.9.0 [INFO] [stderr] Checking unic-char-range v0.9.0 [INFO] [stderr] Checking unic-ucd-version v0.9.0 [INFO] [stderr] Checking unic-char-property v0.9.0 [INFO] [stderr] Checking hashbrown v0.12.3 [INFO] [stderr] Checking num-rational v0.4.1 [INFO] [stderr] Checking base64 v0.20.0 [INFO] [stderr] Checking chrono v0.4.35 [INFO] [stderr] Checking unic-ucd-segment v0.9.0 [INFO] [stderr] Checking deunicode v1.4.3 [INFO] [stderr] Checking str_indices v0.4.3 [INFO] [stderr] Checking nom v7.1.3 [INFO] [stderr] Checking ropey v1.6.1 [INFO] [stderr] Compiling pest_meta v2.7.8 [INFO] [stderr] Checking encoding_rs_io v0.1.7 [INFO] [stderr] Checking unic-segment v0.9.0 [INFO] [stderr] Checking slug v0.1.5 [INFO] [stderr] Checking humansize v2.1.3 [INFO] [stderr] Checking xmlparser v0.13.6 [INFO] [stderr] Checking rand_core v0.6.4 [INFO] [stderr] Checking serde_json v1.0.114 [INFO] [stderr] Checking num-complex v0.4.5 [INFO] [stderr] Checking toml_datetime v0.6.5 [INFO] [stderr] Checking serde_spanned v0.6.5 [INFO] [stderr] Checking rand_chacha v0.3.1 [INFO] [stderr] Checking petgraph v0.6.4 [INFO] [stderr] Checking bimap v0.6.3 [INFO] [stderr] Checking envy v0.4.2 [INFO] [stderr] Checking toml_edit v0.19.15 [INFO] [stderr] Checking rand v0.8.5 [INFO] [stderr] Compiling pest_generator v2.7.8 [INFO] [stderr] Checking quick-error v2.0.1 [INFO] [stderr] Checking roxmltree v0.18.1 [INFO] [stderr] Checking simba v0.7.3 [INFO] [stderr] Checking minijinja v1.0.12 [INFO] [stderr] Checking clap v4.5.2 [INFO] [stderr] Checking bstr v1.9.1 [INFO] [stderr] Checking regex v1.10.3 [INFO] [stderr] Checking env_logger v0.10.2 [INFO] [stderr] Checking ordered-float v3.9.2 [INFO] [stderr] Checking rand_distr v0.4.3 [INFO] [stderr] Compiling pest_derive v2.7.8 [INFO] [stderr] Checking globset v0.4.14 [INFO] [stderr] Checking grep-searcher v0.1.13 [INFO] [stderr] Checking grep-regex v0.1.12 [INFO] [stderr] Compiling nalgebra-macros v0.1.0 [INFO] [stderr] Checking toml v0.7.8 [INFO] [stderr] Checking ignore v0.4.22 [INFO] [stderr] Checking grep-cli v0.1.10 [INFO] [stderr] Checking grep-printer v0.1.7 [INFO] [stderr] Checking gchemol-gut v0.4.4 [INFO] [stderr] Checking handlebars v4.0.1 [INFO] [stderr] Checking gchemol-graph v0.1.6 [INFO] [stderr] Compiling phf_generator v0.11.2 [INFO] [stderr] Checking globwalk v0.8.1 [INFO] [stderr] Compiling phf_codegen v0.11.2 [INFO] [stderr] Checking grep v0.2.13 [INFO] [stderr] Checking gchemol-parser v0.4.6 [INFO] [stderr] Compiling parse-zoneinfo v0.3.0 [INFO] [stderr] Compiling chrono-tz-build v0.2.1 [INFO] [stderr] Compiling lazy-regex-proc_macros v2.4.1 [INFO] [stderr] Compiling chrono-tz v0.8.6 [INFO] [stderr] Checking lazy-regex v2.5.0 [INFO] [stderr] Checking nalgebra v0.31.4 [INFO] [stderr] Checking tera v1.19.1 [INFO] [stderr] Checking vecfx v0.1.6 [INFO] [stderr] Checking gchemol-lattice v0.1.2 [INFO] [stderr] Checking octree v0.1.0 [INFO] [stderr] Checking gchemol-geometry v0.1.1 [INFO] [stderr] Checking gchemol-neighbors v0.1.3 [INFO] [stderr] Checking gchemol-core v0.1.6 [INFO] [stderr] Checking gchemol-readwrite v0.1.10 (/opt/rustwide/workdir) [INFO] [stdout] warning: the item `Molecule` is imported redundantly [INFO] [stdout] --> src/template/hbs.rs:7:5 [INFO] [stdout] | [INFO] [stdout] 6 | use super::*; [INFO] [stdout] | -------- the item `Molecule` is already imported here [INFO] [stdout] 7 | use gchemol_core::Molecule; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `PathBuf` [INFO] [stdout] --> src/template/jinja.rs:3:23 [INFO] [stdout] | [INFO] [stdout] 3 | use std::path::{Path, PathBuf}; [INFO] [stdout] | ^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: the item `Molecule` is imported redundantly [INFO] [stdout] --> src/template/tera.rs:5:5 [INFO] [stdout] | [INFO] [stdout] 4 | use super::*; [INFO] [stdout] | -------- the item `Molecule` is already imported here [INFO] [stdout] 5 | use gchemol_core::Molecule; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: the item `Molecule` is imported redundantly [INFO] [stdout] --> src/template/hbs.rs:7:5 [INFO] [stdout] | [INFO] [stdout] 6 | use super::*; [INFO] [stdout] | -------- the item `Molecule` is already imported here [INFO] [stdout] 7 | use gchemol_core::Molecule; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `PathBuf` [INFO] [stdout] --> src/template/jinja.rs:3:23 [INFO] [stdout] | [INFO] [stdout] 3 | use std::path::{Path, PathBuf}; [INFO] [stdout] | ^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: the item `Molecule` is imported redundantly [INFO] [stdout] --> src/template/tera.rs:5:5 [INFO] [stdout] | [INFO] [stdout] 4 | use super::*; [INFO] [stdout] | -------- the item `Molecule` is already imported here [INFO] [stdout] 5 | use gchemol_core::Molecule; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated method `gchemol_core::Atom::label`: use get_label instead [INFO] [stdout] --> src/formats/mol2.rs:113:18 [INFO] [stdout] | [INFO] [stdout] 113 | name = a.label(), [INFO] [stdout] | ^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(deprecated)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated method `gchemol_core::Atom::label`: use get_label instead [INFO] [stdout] --> src/formats/pdb.rs:150:16 [INFO] [stdout] | [INFO] [stdout] 150 | name=a.label(), [INFO] [stdout] | ^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated method `gchemol_core::Atom::label`: use get_label instead [INFO] [stdout] --> src/formats/mol2.rs:113:18 [INFO] [stdout] | [INFO] [stdout] 113 | name = a.label(), [INFO] [stdout] | ^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(deprecated)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated method `gchemol_core::Atom::label`: use get_label instead [INFO] [stdout] --> src/formats/pdb.rs:150:16 [INFO] [stdout] | [INFO] [stdout] 150 | name=a.label(), [INFO] [stdout] | ^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `rc` [INFO] [stdout] --> src/template/hbs.rs:19:5 [INFO] [stdout] | [INFO] [stdout] 19 | rc: &mut RenderContext, [INFO] [stdout] | ^^ help: if this is intentional, prefix it with an underscore: `_rc` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/template/jinja.rs:126:9 [INFO] [stdout] | [INFO] [stdout] 126 | let mut env = Environment::new(); [INFO] [stdout] | ----^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_mut)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: static `GLOBAL_REX` is never used [INFO] [stdout] --> src/template/jinja.rs:11:8 [INFO] [stdout] | [INFO] [stdout] 11 | static GLOBAL_REX: Lazy = lazy_regex!("^ab+$"i); [INFO] [stdout] | ^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `render` is never used [INFO] [stdout] --> src/template/jinja.rs:125:8 [INFO] [stdout] | [INFO] [stdout] 125 | pub fn render(json_source: &str, template: &str) -> Result { [INFO] [stdout] | ^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 9 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `rc` [INFO] [stdout] --> src/template/hbs.rs:19:5 [INFO] [stdout] | [INFO] [stdout] 19 | rc: &mut RenderContext, [INFO] [stdout] | ^^ help: if this is intentional, prefix it with an underscore: `_rc` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `x` [INFO] [stdout] --> src/template/hbs.rs:108:9 [INFO] [stdout] | [INFO] [stdout] 108 | let x = render_molecule_with(&mol, &template).unwrap(); [INFO] [stdout] | ^ help: if this is intentional, prefix it with an underscore: `_x` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/template/jinja.rs:126:9 [INFO] [stdout] | [INFO] [stdout] 126 | let mut env = Environment::new(); [INFO] [stdout] | ----^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_mut)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `gchemol_core::Molecule` [INFO] [stdout] --> tests/cif.rs:4:5 [INFO] [stdout] | [INFO] [stdout] 4 | use gchemol_core::Molecule; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `gchemol_readwrite::prelude::*` [INFO] [stdout] --> tests/cif.rs:5:5 [INFO] [stdout] | [INFO] [stdout] 5 | use gchemol_readwrite::prelude::*; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `gchemol_readwrite::prelude::*` [INFO] [stdout] --> tests/mol2.rs:3:5 [INFO] [stdout] | [INFO] [stdout] 3 | use gchemol_readwrite::prelude::*; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `gchemol_readwrite::read_all` [INFO] [stdout] --> tests/cml.rs:4:5 [INFO] [stdout] | [INFO] [stdout] 4 | use gchemol_readwrite::read_all; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `gchemol_core::Molecule` [INFO] [stdout] --> tests/gaussian.rs:4:5 [INFO] [stdout] | [INFO] [stdout] 4 | use gchemol_core::Molecule; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `gchemol_readwrite::prelude::*` [INFO] [stdout] --> tests/gaussian.rs:5:5 [INFO] [stdout] | [INFO] [stdout] 5 | use gchemol_readwrite::prelude::*; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `gchemol_readwrite::read_all` [INFO] [stdout] --> tests/template.rs:4:5 [INFO] [stdout] | [INFO] [stdout] 4 | use gchemol_readwrite::read_all; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `gchemol_core::Molecule` [INFO] [stdout] --> tests/vasp.rs:4:5 [INFO] [stdout] | [INFO] [stdout] 4 | use gchemol_core::Molecule; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `gchemol_readwrite::prelude::*` [INFO] [stdout] --> tests/vasp.rs:5:5 [INFO] [stdout] | [INFO] [stdout] 5 | use gchemol_readwrite::prelude::*; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `gut::prelude` [INFO] [stdout] --> tests/cif.rs:8:5 [INFO] [stdout] | [INFO] [stdout] 8 | use gut::prelude::*; [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `gchemol_readwrite::read_all` [INFO] [stdout] --> tests/cjson.rs:4:5 [INFO] [stdout] | [INFO] [stdout] 4 | use gchemol_readwrite::read_all; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `gchemol_core::Molecule` [INFO] [stdout] --> tests/pdb.rs:4:5 [INFO] [stdout] | [INFO] [stdout] 4 | use gchemol_core::Molecule; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `gchemol_readwrite::prelude::*` [INFO] [stdout] --> tests/pdb.rs:5:5 [INFO] [stdout] | [INFO] [stdout] 5 | use gchemol_readwrite::prelude::*; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 3 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: static `GLOBAL_REX` is never used [INFO] [stdout] --> src/template/jinja.rs:11:8 [INFO] [stdout] | [INFO] [stdout] 11 | static GLOBAL_REX: Lazy = lazy_regex!("^ab+$"i); [INFO] [stdout] | ^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `render` is never used [INFO] [stdout] --> src/template/jinja.rs:125:8 [INFO] [stdout] | [INFO] [stdout] 125 | pub fn render(json_source: &str, template: &str) -> Result { [INFO] [stdout] | ^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 2 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 2 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 2 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `gchemol_core::Molecule` [INFO] [stdout] --> tests/sdf.rs:4:5 [INFO] [stdout] | [INFO] [stdout] 4 | use gchemol_core::Molecule; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `gchemol_readwrite::prelude::*` [INFO] [stdout] --> tests/sdf.rs:5:5 [INFO] [stdout] | [INFO] [stdout] 5 | use gchemol_readwrite::prelude::*; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `gchemol_readwrite::read_all` [INFO] [stdout] --> tests/xsd.rs:4:5 [INFO] [stdout] | [INFO] [stdout] 4 | use gchemol_readwrite::read_all; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `gchemol_readwrite::read_all` [INFO] [stdout] --> tests/basic.rs:4:5 [INFO] [stdout] | [INFO] [stdout] 4 | use gchemol_readwrite::read_all; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `gchemol_core::Molecule` [INFO] [stdout] --> tests/pxyz.rs:4:5 [INFO] [stdout] | [INFO] [stdout] 4 | use gchemol_core::Molecule; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `gchemol_readwrite::prelude::*` [INFO] [stdout] --> tests/pxyz.rs:5:5 [INFO] [stdout] | [INFO] [stdout] 5 | use gchemol_readwrite::prelude::*; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 10 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 2 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 2 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 14.71s [INFO] running `Command { std: "docker" "inspect" "2d6ced48f90eaba35f1b8d751c082c257f712258191bb5a88047b653cde12392", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "2d6ced48f90eaba35f1b8d751c082c257f712258191bb5a88047b653cde12392", kill_on_drop: false }` [INFO] [stdout] 2d6ced48f90eaba35f1b8d751c082c257f712258191bb5a88047b653cde12392