[INFO] fetching crate hgvs 0.14.1...
[INFO] checking hgvs-0.14.1 against master#4d1bd0db7f489b22c6d8aa2385937a95412c015b for pr-114682
[INFO] extracting crate hgvs 0.14.1 into /workspace/builds/worker-7-tc1/source
[INFO] validating manifest of crates.io crate hgvs 0.14.1 on toolchain 4d1bd0db7f489b22c6d8aa2385937a95412c015b
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+4d1bd0db7f489b22c6d8aa2385937a95412c015b" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking crates.io crate hgvs 0.14.1
[INFO] finished tweaking crates.io crate hgvs 0.14.1
[INFO] tweaked toml for crates.io crate hgvs 0.14.1 written to /workspace/builds/worker-7-tc1/source/Cargo.toml
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+4d1bd0db7f489b22c6d8aa2385937a95412c015b" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+4d1bd0db7f489b22c6d8aa2385937a95412c015b" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded test-log v0.2.14
[INFO] [stderr]   Downloaded allocator-api2 v0.2.16
[INFO] [stderr]   Downloaded phf_shared v0.11.2
[INFO] [stderr]   Downloaded clap v4.4.11
[INFO] [stderr]   Downloaded fxhash v0.2.1
[INFO] [stderr]   Downloaded fallible-streaming-iterator v0.1.9
[INFO] [stderr]   Downloaded noodles-bgzf v0.25.0
[INFO] [stderr]   Downloaded sha2 v0.10.8
[INFO] [stderr]   Downloaded cast v0.3.0
[INFO] [stderr]   Downloaded plotters-svg v0.3.5
[INFO] [stderr]   Downloaded postgres-protocol v0.6.6
[INFO] [stderr]   Downloaded quick_cache v0.4.0
[INFO] [stderr]   Downloaded clap_lex v0.6.0
[INFO] [stderr]   Downloaded bio-types v1.0.1
[INFO] [stderr]   Downloaded tinytemplate v1.2.1
[INFO] [stderr]   Downloaded derive-new v0.5.9
[INFO] [stderr]   Downloaded csv-core v0.1.11
[INFO] [stderr]   Downloaded simba v0.6.0
[INFO] [stderr]   Downloaded ndarray v0.15.6
[INFO] [stderr]   Downloaded insta v1.34.0
[INFO] [stderr]   Downloaded windows_aarch64_msvc v0.42.2
[INFO] [stderr]   Downloaded windows_i686_gnu v0.42.2
[INFO] [stderr]   Downloaded libsqlite3-sys v0.26.0
[INFO] [stderr]   Downloaded windows_x86_64_msvc v0.42.2
[INFO] [stderr]   Downloaded windows_i686_msvc v0.42.2
[INFO] [stderr]   Downloaded csv v1.3.0
[INFO] [stderr]   Downloaded windows_x86_64_gnu v0.42.2
[INFO] [stderr]   Downloaded finl_unicode v1.2.0
[INFO] [stderr]   Downloaded nalgebra v0.29.0
[INFO] [stderr]   Downloaded itertools-num v0.1.3
[INFO] [stderr]   Downloaded windows_aarch64_gnullvm v0.42.2
[INFO] [stderr]   Downloaded rusqlite v0.29.0
[INFO] [stderr]   Downloaded zerocopy v0.7.32
[INFO] [stderr]   Downloaded seqrepo v0.9.0
[INFO] [stderr]   Downloaded windows_x86_64_gnullvm v0.42.2
[INFO] [stderr]   Downloaded noodles-fasta v0.30.0
[INFO] [stderr]   Downloaded plotters v0.3.5
[INFO] [stderr]   Downloaded wide v0.7.13
[INFO] [stderr]   Downloaded criterion v0.5.1
[INFO] [stderr]   Downloaded safe_arch v0.7.1
[INFO] [stderr]   Downloaded statrs v0.16.0
[INFO] [stderr]   Downloaded clap_builder v4.4.11
[INFO] [stderr]   Downloaded tokio-postgres v0.7.10
[INFO] [stderr]   Downloaded multimap v0.9.1
[INFO] [stderr]   Downloaded similar v2.3.0
[INFO] [stderr]   Downloaded editdistancek v1.0.2
[INFO] [stderr]   Downloaded hmac v0.12.1
[INFO] [stderr]   Downloaded postgres-types v0.2.6
[INFO] [stderr]   Downloaded triple_accel v0.4.0
[INFO] [stderr]   Downloaded stringprep v0.1.4
[INFO] [stderr]   Downloaded rstest_macros v0.18.2
[INFO] [stderr]   Downloaded enum-map-derive v0.17.0
[INFO] [stderr]   Downloaded enum-map v2.7.3
[INFO] [stderr]   Downloaded md-5 v0.10.6
[INFO] [stderr]   Downloaded env_logger v0.10.1
[INFO] [stderr]   Downloaded relative-path v1.9.0
[INFO] [stderr]   Downloaded rstest v0.18.2
[INFO] [stderr]   Downloaded custom_derive v0.1.7
[INFO] [stderr]   Downloaded semver v0.1.20
[INFO] [stderr]   Downloaded strum_macros v0.25.3
[INFO] [stderr]   Downloaded yaml-rust v0.4.5
[INFO] [stderr]   Downloaded ordered-float v3.9.2
[INFO] [stderr]   Downloaded bio v1.5.0
[INFO] [stderr]   Downloaded rustc_version v0.1.7
[INFO] [stderr]   Downloaded linked-hash-map v0.5.6
[INFO] [stderr]   Downloaded siphasher v0.3.11
[INFO] [stderr]   Downloaded anes v0.1.6
[INFO] [stderr]   Downloaded futures-timer v3.0.2
[INFO] [stderr]   Downloaded biocommons-bioutils v0.1.4
[INFO] [stderr]   Downloaded criterion-plot v0.5.0
[INFO] [stderr]   Downloaded plotters-backend v0.3.5
[INFO] [stderr]   Downloaded base16ct v0.2.0
[INFO] [stderr]   Downloaded feature-probe v0.1.1
[INFO] [stderr]   Downloaded ciborium-ll v0.2.1
[INFO] [stderr]   Downloaded newtype_derive v0.1.6
[INFO] [stderr]   Downloaded getset v0.1.2
[INFO] [stderr]   Downloaded zerocopy-derive v0.7.32
[INFO] [stderr]   Downloaded phf v0.11.2
[INFO] [stderr]   Downloaded hashlink v0.8.4
[INFO] [stderr]   Downloaded postgres v0.19.7
[INFO] [stderr]   Downloaded anstyle v1.0.4
[INFO] [stderr]   Downloaded ciborium v0.2.1
[INFO] [stderr]   Downloaded noodles-core v0.12.0
[INFO] [stderr]   Downloaded test-log-macros v0.2.14
[INFO] [stderr]   Downloaded ciborium-io v0.2.1
[INFO] [stderr]   Downloaded oorandom v11.1.3
[INFO] [stderr]   Downloaded strum v0.25.0
[INFO] [stderr]   Downloaded windows-targets v0.42.2
[INFO] [stderr]   Downloaded ahash v0.8.6
[INFO] [stderr]   Downloaded half v1.8.2
[INFO] [stderr]   Downloaded bv v0.11.1
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+4d1bd0db7f489b22c6d8aa2385937a95412c015b" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] b90cc50d5e0bf94d7265974f594ad1f5e475b3371f4ad16d15df4a73873a2ff6
[INFO] running `Command { std: "docker" "start" "-a" "b90cc50d5e0bf94d7265974f594ad1f5e475b3371f4ad16d15df4a73873a2ff6", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "b90cc50d5e0bf94d7265974f594ad1f5e475b3371f4ad16d15df4a73873a2ff6", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "b90cc50d5e0bf94d7265974f594ad1f5e475b3371f4ad16d15df4a73873a2ff6", kill_on_drop: false }`
[INFO] [stdout] b90cc50d5e0bf94d7265974f594ad1f5e475b3371f4ad16d15df4a73873a2ff6
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+4d1bd0db7f489b22c6d8aa2385937a95412c015b" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] cc16b50427db06d7ae06b129808c80252910a38fd498a09fd8bfdc58e551c1d8
[INFO] running `Command { std: "docker" "start" "-a" "cc16b50427db06d7ae06b129808c80252910a38fd498a09fd8bfdc58e551c1d8", kill_on_drop: false }`
[INFO] [stderr]    Compiling libm v0.2.8
[INFO] [stderr]    Compiling num-traits v0.2.17
[INFO] [stderr]     Checking once_cell v1.19.0
[INFO] [stderr]    Compiling typenum v1.17.0
[INFO] [stderr]    Compiling serde v1.0.193
[INFO] [stderr]    Compiling crossbeam-utils v0.8.17
[INFO] [stderr]     Checking zerocopy v0.7.32
[INFO] [stderr]     Checking ppv-lite86 v0.2.17
[INFO] [stderr]    Compiling generic-array v0.14.7
[INFO] [stderr]    Compiling ahash v0.8.6
[INFO] [stderr]    Compiling futures-core v0.3.29
[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]     Checking byteorder v1.5.0
[INFO] [stderr]     Checking allocator-api2 v0.2.16
[INFO] [stderr]     Checking getrandom v0.2.11
[INFO] [stderr]    Compiling syn v2.0.42
[INFO] [stderr]     Checking rand_core v0.6.4
[INFO] [stderr]     Checking subtle v2.5.0
[INFO] [stderr]     Checking futures-sink v0.3.29
[INFO] [stderr]    Compiling num-integer v0.1.45
[INFO] [stderr]    Compiling crc32fast v1.3.2
[INFO] [stderr]    Compiling futures-util v0.3.29
[INFO] [stderr]     Checking tinyvec_macros v0.1.1
[INFO] [stderr]     Checking bitflags v2.4.1
[INFO] [stderr]    Compiling memoffset v0.9.0
[INFO] [stderr]     Checking tinyvec v1.6.0
[INFO] [stderr]     Checking futures-channel v0.3.29
[INFO] [stderr]    Compiling matrixmultiply v0.3.8
[INFO] [stderr]     Checking rand_chacha v0.3.1
[INFO] [stderr]     Checking fallible-iterator v0.2.0
[INFO] [stderr]     Checking adler v1.0.2
[INFO] [stderr]     Checking rand v0.8.5
[INFO] [stderr]    Compiling semver v1.0.20
[INFO] [stderr]    Compiling paste v1.0.14
[INFO] [stderr]     Checking either v1.9.0
[INFO] [stderr]     Checking hashbrown v0.14.3
[INFO] [stderr]     Checking miniz_oxide v0.7.1
[INFO] [stderr]     Checking safe_arch v0.7.1
[INFO] [stderr]     Checking tracing-core v0.1.32
[INFO] [stderr]    Compiling num-rational v0.4.1
[INFO] [stderr]    Compiling rustversion v1.0.14
[INFO] [stderr]     Checking rawpointer v0.2.1
[INFO] [stderr]    Compiling pkg-config v0.3.28
[INFO] [stderr]     Checking finl_unicode v1.2.0
[INFO] [stderr]     Checking equivalent v1.0.1
[INFO] [stderr]     Checking unicode-bidi v0.3.14
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]    Compiling vcpkg v0.2.15
[INFO] [stderr]    Compiling rustix v0.38.28
[INFO] [stderr]     Checking cpufeatures v0.2.11
[INFO] [stderr]     Checking flate2 v1.0.28
[INFO] [stderr]     Checking wide v0.7.13
[INFO] [stderr]     Checking unicode-normalization v0.1.22
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]     Checking linux-raw-sys v0.4.12
[INFO] [stderr]     Checking siphasher v0.3.11
[INFO] [stderr]     Checking log v0.4.20
[INFO] [stderr]    Compiling feature-probe v0.1.1
[INFO] [stderr]     Checking phf_shared v0.11.2
[INFO] [stderr]    Compiling rustc_version v0.4.0
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling aho-corasick v1.1.2
[INFO] [stderr]     Checking num-complex v0.4.4
[INFO] [stderr]     Checking approx v0.5.1
[INFO] [stderr]     Checking chrono v0.4.31
[INFO] [stderr]     Checking stringprep v0.1.4
[INFO] [stderr]    Compiling bv v0.11.1
[INFO] [stderr]     Checking rand_distr v0.4.3
[INFO] [stderr]     Checking crossbeam-epoch v0.9.16
[INFO] [stderr]     Checking tokio v1.35.1
[INFO] [stderr]     Checking parking_lot v0.12.1
[INFO] [stderr]    Compiling proc-macro-error-attr v1.0.4
[INFO] [stderr]     Checking crossbeam-channel v0.5.9
[INFO] [stderr]     Checking block-buffer v0.10.4
[INFO] [stderr]     Checking crypto-common v0.1.6
[INFO] [stderr]    Compiling libsqlite3-sys v0.26.0
[INFO] [stderr]    Compiling regex-syntax v0.8.2
[INFO] [stderr]    Compiling rayon-core v1.12.0
[INFO] [stderr]     Checking crossbeam-deque v0.8.4
[INFO] [stderr]     Checking digest v0.10.7
[INFO] [stderr]    Compiling rstest_macros v0.18.2
[INFO] [stderr]     Checking noodles-bgzf v0.25.0
[INFO] [stderr]     Checking sha2 v0.10.8
[INFO] [stderr]     Checking hmac v0.12.1
[INFO] [stderr]     Checking md-5 v0.10.6
[INFO] [stderr]     Checking is-terminal v0.4.9
[INFO] [stderr]     Checking phf v0.11.2
[INFO] [stderr]     Checking hashlink v0.8.4
[INFO] [stderr]     Checking csv-core v0.1.11
[INFO] [stderr]     Checking simba v0.6.0
[INFO] [stderr]    Compiling proc-macro-error v1.0.4
[INFO] [stderr]     Checking half v1.8.2
[INFO] [stderr]     Checking bit-vec v0.6.3
[INFO] [stderr]     Checking anstyle v1.0.4
[INFO] [stderr]     Checking ciborium-io v0.2.1
[INFO] [stderr]     Checking postgres-protocol v0.6.6
[INFO] [stderr]     Checking fixedbitset v0.4.2
[INFO] [stderr]     Checking fallible-streaming-iterator v0.1.9
[INFO] [stderr]     Checking clap_lex v0.6.0
[INFO] [stderr]     Checking plotters-backend v0.3.5
[INFO] [stderr]     Checking noodles-core v0.12.0
[INFO] [stderr]     Checking percent-encoding v2.3.1
[INFO] [stderr]     Checking bit-set v0.5.3
[INFO] [stderr]     Checking ciborium-ll v0.2.1
[INFO] [stderr]     Checking clap_builder v4.4.11
[INFO] [stderr]     Checking ndarray v0.15.6
[INFO] [stderr]     Checking itertools-num v0.1.3
[INFO] [stderr]     Checking rusqlite v0.29.0
[INFO] [stderr]     Checking noodles-fasta v0.30.0
[INFO] [stderr]     Checking ordered-float v3.9.2
[INFO] [stderr]     Checking itertools v0.11.0
[INFO] [stderr]     Checking plotters-svg v0.3.5
[INFO] [stderr]     Checking itertools v0.10.5
[INFO] [stderr]     Checking fxhash v0.2.1
[INFO] [stderr]     Checking postgres-types v0.2.6
[INFO] [stderr]     Checking strum v0.25.0
[INFO] [stderr]    Compiling relative-path v1.9.0
[INFO] [stderr]     Checking humantime v2.1.0
[INFO] [stderr]     Checking linked-hash-map v0.5.6
[INFO] [stderr]     Checking same-file v1.0.6
[INFO] [stderr]     Checking triple_accel v0.4.0
[INFO] [stderr]    Compiling glob v0.3.1
[INFO] [stderr]     Checking cast v0.3.0
[INFO] [stderr]     Checking editdistancek v1.0.2
[INFO] [stderr]     Checking custom_derive v0.1.7
[INFO] [stderr]     Checking walkdir v2.4.0
[INFO] [stderr]     Checking env_logger v0.10.1
[INFO] [stderr]     Checking yaml-rust v0.4.5
[INFO] [stderr]     Checking nom v7.1.3
[INFO] [stderr]     Checking rayon v1.8.0
[INFO] [stderr]    Compiling regex-automata v0.4.3
[INFO] [stderr]     Checking plotters v0.3.5
[INFO] [stderr]     Checking quick_cache v0.4.0
[INFO] [stderr] error: could not compile `regex-syntax` (lib)
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/rustup-home/toolchains/4d1bd0db7f489b22c6d8aa2385937a95412c015b/bin/rustc --crate-name regex_syntax --edition=2021 /opt/rustwide/cargo-home/registry/src/index.crates.io-6f17d22bba15001f/regex-syntax-0.8.2/src/lib.rs --error-format=json --json=diagnostic-rendered-ansi,artifacts,future-incompat --crate-type lib --emit=dep-info,metadata,link -C embed-bitcode=no --cfg 'feature="default"' --cfg 'feature="std"' --cfg 'feature="unicode"' --cfg 'feature="unicode-age"' --cfg 'feature="unicode-bool"' --cfg 'feature="unicode-case"' --cfg 'feature="unicode-gencat"' --cfg 'feature="unicode-perl"' --cfg 'feature="unicode-script"' --cfg 'feature="unicode-segment"' -C metadata=57093dc406f0ea76 -C extra-filename=-57093dc406f0ea76 --out-dir /opt/rustwide/target/debug/deps -L dependency=/opt/rustwide/target/debug/deps --cap-lints allow --cap-lints=forbid` (signal: 9, SIGKILL: kill)
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] [stderr] error: could not compile `syn` (lib)
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/rustup-home/toolchains/4d1bd0db7f489b22c6d8aa2385937a95412c015b/bin/rustc --crate-name syn --edition=2021 /opt/rustwide/cargo-home/registry/src/index.crates.io-6f17d22bba15001f/syn-2.0.42/src/lib.rs --error-format=json --json=diagnostic-rendered-ansi,artifacts,future-incompat --crate-type lib --emit=dep-info,metadata,link -C embed-bitcode=no --cfg 'feature="clone-impls"' --cfg 'feature="default"' --cfg 'feature="derive"' --cfg 'feature="extra-traits"' --cfg 'feature="full"' --cfg 'feature="parsing"' --cfg 'feature="printing"' --cfg 'feature="proc-macro"' --cfg 'feature="quote"' --cfg 'feature="visit"' --cfg 'feature="visit-mut"' -C metadata=c5322bfeed55ab02 -C extra-filename=-c5322bfeed55ab02 --out-dir /opt/rustwide/target/debug/deps -L dependency=/opt/rustwide/target/debug/deps --extern proc_macro2=/opt/rustwide/target/debug/deps/libproc_macro2-95abaf13eaff7f64.rmeta --extern quote=/opt/rustwide/target/debug/deps/libquote-5f6dfde12cae4cc3.rmeta --extern unicode_ident=/opt/rustwide/target/debug/deps/libunicode_ident-f8d62a079c79a15a.rmeta --cap-lints allow --cap-lints=forbid` (signal: 9, SIGKILL: kill)
[INFO] running `Command { std: "docker" "inspect" "cc16b50427db06d7ae06b129808c80252910a38fd498a09fd8bfdc58e551c1d8", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "cc16b50427db06d7ae06b129808c80252910a38fd498a09fd8bfdc58e551c1d8", kill_on_drop: false }`
[INFO] [stdout] cc16b50427db06d7ae06b129808c80252910a38fd498a09fd8bfdc58e551c1d8
