[INFO] fetching crate gchemol 0.1.7... [INFO] checking gchemol-0.1.7 against master#e4c14468460b22ac7a289a422fb7fee606e12a0b for pr-114489 [INFO] extracting crate gchemol 0.1.7 into /workspace/builds/worker-4-tc1/source [INFO] validating manifest of crates.io crate gchemol 0.1.7 on toolchain e4c14468460b22ac7a289a422fb7fee606e12a0b [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+e4c14468460b22ac7a289a422fb7fee606e12a0b" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate gchemol 0.1.7 [INFO] finished tweaking crates.io crate gchemol 0.1.7 [INFO] tweaked toml for crates.io crate gchemol 0.1.7 written to /workspace/builds/worker-4-tc1/source/Cargo.toml [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+e4c14468460b22ac7a289a422fb7fee606e12a0b" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+e4c14468460b22ac7a289a422fb7fee606e12a0b" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded gchemol-core v0.1.5 [INFO] [stderr] Downloaded chrono-tz-build v0.0.3 [INFO] [stderr] Downloaded grep-printer v0.1.7 [INFO] [stderr] Downloaded grep v0.2.12 [INFO] [stderr] Downloaded gchemol-gut v0.4.4 [INFO] [stderr] Downloaded grep-regex v0.1.11 [INFO] [stderr] Downloaded grep-cli v0.1.9 [INFO] [stderr] Downloaded gchemol-geometry v0.1.1 [INFO] [stderr] Downloaded gchemol-graph v0.1.5 [INFO] [stderr] Downloaded envy v0.4.2 [INFO] [stderr] Downloaded uom v0.33.0 [INFO] [stderr] Downloaded gchemol-readwrite v0.1.10 [INFO] [stderr] Downloaded octree v0.1.0 [INFO] [stderr] Downloaded gchemol-parser v0.4.5 [INFO] [stderr] Downloaded chrono-tz v0.6.3 [INFO] [stderr] Downloaded gchemol-neighbors v0.1.3 [INFO] [stderr] Downloaded minijinja v1.0.5 [INFO] [stderr] Downloaded nalgebra v0.31.4 [INFO] [stderr] Downloaded ropey v1.6.0 [INFO] [stderr] Downloaded handlebars v4.0.1 [INFO] [stderr] Downloaded grep-matcher v0.1.6 [INFO] [stderr] Downloaded str_indices v0.4.1 [INFO] [stderr] Downloaded vecfx v0.1.6 [INFO] [stderr] Downloaded gchemol-lattice v0.1.2 [INFO] [stderr] Downloaded grep-searcher v0.1.11 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5c16f4e6c37141f9fef0bc86f7a492d732943053e42aab8461035881e3f53823" "/opt/rustwide/cargo-home/bin/cargo" "+e4c14468460b22ac7a289a422fb7fee606e12a0b" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 2c4d1c9168ba074d805a35973f8bd49906974d1e76c5e0971e2ffc39ff31681a [INFO] running `Command { std: "docker" "start" "-a" "2c4d1c9168ba074d805a35973f8bd49906974d1e76c5e0971e2ffc39ff31681a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "2c4d1c9168ba074d805a35973f8bd49906974d1e76c5e0971e2ffc39ff31681a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "2c4d1c9168ba074d805a35973f8bd49906974d1e76c5e0971e2ffc39ff31681a", kill_on_drop: false }` [INFO] [stdout] 2c4d1c9168ba074d805a35973f8bd49906974d1e76c5e0971e2ffc39ff31681a [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5c16f4e6c37141f9fef0bc86f7a492d732943053e42aab8461035881e3f53823" "/opt/rustwide/cargo-home/bin/cargo" "+e4c14468460b22ac7a289a422fb7fee606e12a0b" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 0e65d0742ec8898996223220fb1b45190bdfd16ae656f37704bd491c46ef181f [INFO] running `Command { std: "docker" "start" "-a" "0e65d0742ec8898996223220fb1b45190bdfd16ae656f37704bd491c46ef181f", kill_on_drop: false }` [INFO] [stderr] Compiling serde v1.0.182 [INFO] [stderr] Compiling serde_derive v1.0.182 [INFO] [stderr] Compiling libc v0.2.147 [INFO] [stderr] Compiling proc-macro2 v1.0.66 [INFO] [stderr] Compiling libm v0.2.7 [INFO] [stderr] Compiling num-traits v0.2.16 [INFO] [stderr] Checking regex-syntax v0.7.4 [INFO] [stderr] Checking log v0.4.19 [INFO] [stderr] Checking once_cell v1.18.0 [INFO] [stderr] Compiling rustix v0.38.7 [INFO] [stderr] Compiling crossbeam-utils v0.8.16 [INFO] [stderr] Compiling uncased v0.9.9 [INFO] [stderr] Compiling memoffset v0.9.0 [INFO] [stderr] Compiling serde_json v1.0.104 [INFO] [stderr] Compiling syn v1.0.109 [INFO] [stderr] Checking aho-corasick v1.0.2 [INFO] [stderr] Compiling memchr v2.5.0 [INFO] [stderr] Compiling crossbeam-epoch v0.9.15 [INFO] [stderr] Compiling num-integer v0.1.45 [INFO] [stderr] Checking termcolor v1.2.0 [INFO] [stderr] Checking bytemuck v1.13.1 [INFO] [stderr] Checking safe_arch v0.7.1 [INFO] [stderr] Compiling matrixmultiply v0.3.7 [INFO] [stderr] Compiling quote v1.0.32 [INFO] [stderr] Compiling num-rational v0.4.1 [INFO] [stderr] Checking hashbrown v0.14.0 [INFO] [stderr] Checking equivalent v1.0.1 [INFO] [stderr] Compiling rayon-core v1.11.0 [INFO] [stderr] Checking either v1.9.0 [INFO] [stderr] Compiling syn v2.0.28 [INFO] [stderr] Compiling ppv-lite86 v0.2.17 [INFO] [stderr] Checking wide v0.7.11 [INFO] [stderr] Compiling phf_shared v0.11.2 [INFO] [stderr] Checking crossbeam-deque v0.8.3 [INFO] [stderr] Checking indexmap v2.0.0 [INFO] [stderr] Checking crossbeam-channel v0.5.8 [INFO] [stderr] Checking winnow v0.5.4 [INFO] [stderr] Checking rawpointer v0.2.1 [INFO] [stderr] Checking getrandom v0.2.10 [INFO] [stderr] Checking num_cpus v1.16.0 [INFO] [stderr] Checking approx v0.5.1 [INFO] [stderr] Checking regex-automata v0.3.6 [INFO] [stderr] Checking os_pipe v1.1.4 [INFO] [stderr] Checking shared_child v1.0.0 [INFO] [stderr] Checking itertools v0.10.5 [INFO] [stderr] Checking fastrand v2.0.0 [INFO] [stderr] Checking time-core v0.1.1 [INFO] [stderr] Checking deranged v0.3.7 [INFO] [stderr] Checking humantime v2.1.0 [INFO] [stderr] Checking rayon v1.7.0 [INFO] [stderr] Checking duct v0.13.6 [INFO] [stderr] Checking thread_local v1.1.7 [INFO] [stderr] Checking shell-escape v0.1.5 [INFO] [stderr] Compiling ucd-trie v0.1.6 [INFO] [stderr] Compiling indexmap v1.9.3 [INFO] [stderr] Compiling phf v0.11.2 [INFO] [stderr] Checking is-terminal v0.4.9 [INFO] [stderr] Checking anstream v0.3.2 [INFO] [stderr] Checking tempfile v3.7.0 [INFO] [stderr] Checking clap_builder v4.3.19 [INFO] [stderr] Checking grep-matcher v0.1.6 [INFO] [stderr] Checking encoding_rs v0.8.32 [INFO] [stderr] Checking hashbrown v0.12.3 [INFO] [stderr] Checking memmap2 v0.5.10 [INFO] [stderr] Checking bytecount v0.6.3 [INFO] [stderr] Checking time v0.3.25 [INFO] [stderr] Checking unic-ucd-version v0.9.0 [INFO] [stderr] Checking unic-char-property v0.9.0 [INFO] [stderr] Checking walkdir v2.3.3 [INFO] [stderr] Checking aho-corasick v0.7.20 [INFO] [stderr] Checking iana-time-zone v0.1.57 [INFO] [stderr] Checking regex-syntax v0.6.29 [INFO] [stderr] Checking base64 v0.20.0 [INFO] [stderr] Checking fixedbitset v0.4.2 [INFO] [stderr] Checking chrono v0.4.26 [INFO] [stderr] Checking unic-ucd-segment v0.9.0 [INFO] [stderr] Checking str_indices v0.4.1 [INFO] [stderr] Checking deunicode v0.4.4 [INFO] [stderr] Checking minimal-lexical v0.2.1 [INFO] [stderr] Checking ropey v1.6.0 [INFO] [stderr] Checking humansize v1.1.1 [INFO] [stderr] Checking slug v0.1.4 [INFO] [stderr] Checking unic-segment v0.9.0 [INFO] [stderr] Checking rand_core v0.6.4 [INFO] [stderr] Checking num-complex v0.4.3 [INFO] [stderr] Checking toml_datetime v0.6.3 [INFO] [stderr] Checking serde_spanned v0.6.3 [INFO] [stderr] Checking regex v1.9.3 [INFO] [stderr] Checking bstr v1.6.0 [INFO] [stderr] Checking rand_chacha v0.3.1 [INFO] [stderr] Checking toml_edit v0.19.14 [INFO] [stderr] Checking encoding_rs_io v0.1.7 [INFO] [stderr] Checking petgraph v0.6.3 [INFO] [stderr] Checking rand v0.8.5 [INFO] [stderr] Checking nom v7.1.3 [INFO] [stderr] Checking env_logger v0.10.0 [INFO] [stderr] Checking simba v0.7.3 [INFO] [stderr] Checking envy v0.4.2 [INFO] [stderr] Checking bimap v0.6.3 [INFO] [stderr] Checking xmlparser v0.13.5 [INFO] [stderr] Checking globset v0.4.13 [INFO] [stderr] Checking grep-searcher v0.1.11 [INFO] [stderr] Checking quick-error v2.0.1 [INFO] [stderr] Checking minijinja v1.0.5 [INFO] [stderr] Checking uom v0.33.0 [INFO] [stderr] Checking grep-cli v0.1.9 [INFO] [stderr] Checking ignore v0.4.20 [INFO] [stderr] Checking grep-printer v0.1.7 [INFO] [stderr] Checking roxmltree v0.18.0 [INFO] [stderr] Checking grep-regex v0.1.11 [INFO] [stderr] Checking globwalk v0.8.1 [INFO] [stderr] Checking ordered-float v3.7.0 [INFO] [stderr] Checking rand_distr v0.4.3 [INFO] [stderr] Checking grep v0.2.12 [INFO] [stderr] Checking toml v0.7.6 [INFO] [stderr] Compiling nalgebra-macros v0.1.0 [INFO] [stderr] Compiling thiserror-impl v1.0.44 [INFO] [stderr] Compiling clap_derive v4.3.12 [INFO] [stderr] Compiling phf_generator v0.11.2 [INFO] [stderr] Compiling parse-zoneinfo v0.3.0 [INFO] [stderr] Compiling phf_codegen v0.11.2 [INFO] [stderr] Checking gchemol-graph v0.1.5 [INFO] [stderr] Compiling chrono-tz-build v0.0.3 [INFO] [stderr] Compiling lazy-regex-proc_macros v2.4.1 [INFO] [stderr] Compiling chrono-tz v0.6.3 [INFO] [stderr] Compiling thiserror v1.0.44 [INFO] [stderr] Compiling pest v2.7.2 [INFO] [stderr] Checking lazy-regex v2.5.0 [INFO] [stderr] Checking clap v4.3.19 [INFO] [stderr] Checking gchemol-gut v0.4.4 [INFO] [stderr] Compiling pest_meta v2.7.2 [INFO] [stderr] Checking gchemol-parser v0.4.5 [INFO] [stderr] Compiling pest_generator v2.7.2 [INFO] [stderr] Compiling pest_derive v2.7.2 [INFO] [stderr] Checking nalgebra v0.31.4 [INFO] [stderr] Checking handlebars v4.0.1 [INFO] [stderr] Checking tera v1.17.1 [INFO] [stderr] Checking vecfx v0.1.6 [INFO] [stderr] Checking octree v0.1.0 [INFO] [stderr] Checking gchemol-lattice v0.1.2 [INFO] [stderr] Checking gchemol-geometry v0.1.1 [INFO] [stderr] Checking gchemol-neighbors v0.1.3 [INFO] [stderr] Checking gchemol-core v0.1.5 [INFO] [stderr] Checking gchemol-readwrite v0.1.10 [INFO] [stderr] Checking gchemol v0.1.7 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused import: `gchemol::prelude::*` [INFO] [stdout] --> tests/molecule.rs:3:5 [INFO] [stdout] | [INFO] [stdout] 3 | use gchemol::prelude::*; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `gchemol::prelude::*` [INFO] [stdout] --> tests/crystal.rs:60:9 [INFO] [stdout] | [INFO] [stdout] 60 | use gchemol::prelude::*; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `mol` [INFO] [stdout] --> tests/io.rs:44:9 [INFO] [stdout] | [INFO] [stdout] 44 | for mol in gchemol::io::read(&f).expect("read mol2") { [INFO] [stdout] | ^^^ help: if this is intentional, prefix it with an underscore: `_mol` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `gchemol_gut::prelude::*` [INFO] [stdout] --> tests/selection.rs:7:5 [INFO] [stdout] | [INFO] [stdout] 7 | use gchemol_gut::prelude::*; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `gchemol_gut::utils::abbreviate_numbers_human_readable` [INFO] [stdout] --> tests/selection.rs:8:5 [INFO] [stdout] | [INFO] [stdout] 8 | use gchemol_gut::utils::abbreviate_numbers_human_readable; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 2 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 33.16s [INFO] running `Command { std: "docker" "inspect" "0e65d0742ec8898996223220fb1b45190bdfd16ae656f37704bd491c46ef181f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "0e65d0742ec8898996223220fb1b45190bdfd16ae656f37704bd491c46ef181f", kill_on_drop: false }` [INFO] [stdout] 0e65d0742ec8898996223220fb1b45190bdfd16ae656f37704bd491c46ef181f