[INFO] cloning repository https://github.com/brainstorm/s3-rust-noodles-bam [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/brainstorm/s3-rust-noodles-bam" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbrainstorm%2Fs3-rust-noodles-bam", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbrainstorm%2Fs3-rust-noodles-bam'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 17cd3f42ef391e3fab9f5f4b1f39ca655dbd4d31 [INFO] checking brainstorm/s3-rust-noodles-bam against master#ce1a7e41f96be27103b6e3ba09dcefbf5bd320bd for pr-103914 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbrainstorm%2Fs3-rust-noodles-bam" "/workspace/builds/worker-0/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-0/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/brainstorm/s3-rust-noodles-bam on toolchain ce1a7e41f96be27103b6e3ba09dcefbf5bd320bd [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+ce1a7e41f96be27103b6e3ba09dcefbf5bd320bd" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/brainstorm/s3-rust-noodles-bam [INFO] finished tweaking git repo https://github.com/brainstorm/s3-rust-noodles-bam [INFO] tweaked toml for git repo https://github.com/brainstorm/s3-rust-noodles-bam written to /workspace/builds/worker-0/source/Cargo.toml [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+ce1a7e41f96be27103b6e3ba09dcefbf5bd320bd" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }` [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+ce1a7e41f96be27103b6e3ba09dcefbf5bd320bd" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded transform-stream v0.2.0 [INFO] [stderr] Downloaded sha2 v0.10.6 [INFO] [stderr] Downloaded time-macros v0.2.5 [INFO] [stderr] Downloaded s3-server v0.2.0 [INFO] [stderr] Downloaded zeroize v1.5.7 [INFO] [stderr] Downloaded lambda_runtime_api_client v0.5.0 [INFO] [stderr] Downloaded const-str-proc-macro v0.3.2 [INFO] [stderr] Downloaded path-dedot v3.0.18 [INFO] [stderr] Downloaded path-absolutize v3.0.14 [INFO] [stderr] Downloaded async-fs v1.6.0 [INFO] [stderr] Downloaded lambda_runtime v0.5.1 [INFO] [stderr] Downloaded http-serde v1.1.2 [INFO] [stderr] Downloaded query_map v0.5.0 [INFO] [stderr] Downloaded aws_lambda_events v0.6.3 [INFO] [stderr] Downloaded urlencoding v2.1.2 [INFO] [stderr] Downloaded aws-smithy-types v0.41.0 [INFO] [stderr] Downloaded aws-sig-auth v0.11.0 [INFO] [stderr] Downloaded aws-smithy-http-tower v0.41.0 [INFO] [stderr] Downloaded aws-smithy-http v0.41.0 [INFO] [stderr] Downloaded aws-smithy-eventstream v0.41.0 [INFO] [stderr] Downloaded lambda_http v0.5.2 [INFO] [stderr] Downloaded aws-smithy-xml v0.41.0 [INFO] [stderr] Downloaded hdrhistogram v7.5.2 [INFO] [stderr] Downloaded const-str v0.3.2 [INFO] [stderr] Downloaded aws-sdk-sso v0.11.0 [INFO] [stderr] Downloaded aws-smithy-async v0.41.0 [INFO] [stderr] Downloaded aws-smithy-json v0.41.0 [INFO] [stderr] Downloaded aws-config v0.11.0 [INFO] [stderr] Downloaded aws-smithy-query v0.41.0 [INFO] [stderr] Downloaded aws-http v0.11.0 [INFO] [stderr] Downloaded time-core v0.1.0 [INFO] [stderr] Downloaded aws-smithy-client v0.41.0 [INFO] [stderr] Downloaded aws-endpoint v0.11.0 [INFO] [stderr] Downloaded noodles-bgzf v0.11.0 [INFO] [stderr] Downloaded time v0.3.16 [INFO] [stderr] Downloaded md-5 v0.10.5 [INFO] [stderr] Downloaded bytes-utils v0.1.3 [INFO] [stderr] Downloaded aws-sdk-s3 v0.11.0 [INFO] [stderr] Downloaded simd-abstraction v0.5.1 [INFO] [stderr] Downloaded aws-sigv4 v0.11.0 [INFO] [stderr] Downloaded aws-types v0.11.0 [INFO] [stderr] Downloaded noodles v0.22.0 [INFO] [stderr] Downloaded noodles-fasta v0.10.0 [INFO] [stderr] Downloaded noodles-bam v0.18.0 [INFO] [stderr] Downloaded noodles-csi v0.6.0 [INFO] [stderr] Downloaded noodles-sam v0.15.0 [INFO] [stderr] Downloaded noodles-core v0.6.0 [INFO] [stderr] Downloaded hex-simd v0.5.1 [INFO] [stderr] Downloaded tokio-stream v0.1.11 [INFO] [stderr] Downloaded aws-sdk-sts v0.11.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:83125433e4fff17b1ac56874832f668d9df75ee638575aca552b68e127bedee9" "/opt/rustwide/cargo-home/bin/cargo" "+ce1a7e41f96be27103b6e3ba09dcefbf5bd320bd" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 2c41a4fa6d8849e9a986e818d660e5946d563a44b90eb1aee79bff113d33d10c [INFO] running `Command { std: "docker" "start" "-a" "2c41a4fa6d8849e9a986e818d660e5946d563a44b90eb1aee79bff113d33d10c", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "2c41a4fa6d8849e9a986e818d660e5946d563a44b90eb1aee79bff113d33d10c", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "2c41a4fa6d8849e9a986e818d660e5946d563a44b90eb1aee79bff113d33d10c", kill_on_drop: false }` [INFO] [stdout] 2c41a4fa6d8849e9a986e818d660e5946d563a44b90eb1aee79bff113d33d10c [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:83125433e4fff17b1ac56874832f668d9df75ee638575aca552b68e127bedee9" "/opt/rustwide/cargo-home/bin/cargo" "+ce1a7e41f96be27103b6e3ba09dcefbf5bd320bd" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 76e236e7ac1a48ae31085108f482af60b59a0b1e686758013f5ae03fb6c1b2ba [INFO] running `Command { std: "docker" "start" "-a" "76e236e7ac1a48ae31085108f482af60b59a0b1e686758013f5ae03fb6c1b2ba", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.47 [INFO] [stderr] Compiling unicode-ident v1.0.5 [INFO] [stderr] Compiling quote v1.0.21 [INFO] [stderr] Compiling syn v1.0.103 [INFO] [stderr] Compiling autocfg v1.1.0 [INFO] [stderr] Compiling libc v0.2.137 [INFO] [stderr] Checking cfg-if v1.0.0 [INFO] [stderr] Compiling memchr v2.5.0 [INFO] [stderr] Checking once_cell v1.16.0 [INFO] [stderr] Compiling serde_derive v1.0.147 [INFO] [stderr] Compiling serde v1.0.147 [INFO] [stderr] Checking pin-project-lite v0.2.9 [INFO] [stderr] Compiling log v0.4.17 [INFO] [stderr] Compiling futures-core v0.3.25 [INFO] [stderr] Checking futures-io v0.3.25 [INFO] [stderr] Compiling cc v1.0.74 [INFO] [stderr] Checking futures-sink v0.3.25 [INFO] [stderr] Checking itoa v1.0.4 [INFO] [stderr] Compiling futures-task v0.3.25 [INFO] [stderr] Compiling futures-channel v0.3.25 [INFO] [stderr] Compiling futures-util v0.3.25 [INFO] [stderr] Checking tracing-core v0.1.30 [INFO] [stderr] Checking pin-utils v0.1.0 [INFO] [stderr] Checking hashbrown v0.12.3 [INFO] [stderr] Checking fnv v1.0.7 [INFO] [stderr] Checking ryu v1.0.11 [INFO] [stderr] Compiling crc32fast v1.3.2 [INFO] [stderr] Compiling httparse v1.8.0 [INFO] [stderr] Checking try-lock v0.2.3 [INFO] [stderr] Checking tower-service v0.3.2 [INFO] [stderr] Checking httpdate v1.0.2 [INFO] [stderr] Checking percent-encoding v2.2.0 [INFO] [stderr] Checking byteorder v1.4.3 [INFO] [stderr] Checking base64 v0.13.1 [INFO] [stderr] Compiling semver v1.0.14 [INFO] [stderr] Checking untrusted v0.7.1 [INFO] [stderr] Checking want v0.3.0 [INFO] [stderr] Checking spin v0.5.2 [INFO] [stderr] Checking time-core v0.1.0 [INFO] [stderr] Compiling tokio v1.21.2 [INFO] [stderr] Compiling slab v0.4.7 [INFO] [stderr] Compiling indexmap v1.9.1 [INFO] [stderr] Compiling num-traits v0.2.15 [INFO] [stderr] Compiling num-integer v0.1.45 [INFO] [stderr] Checking openssl-probe v0.1.5 [INFO] [stderr] Checking num_threads v0.1.6 [INFO] [stderr] Compiling version_check v0.9.4 [INFO] [stderr] Compiling typenum v1.15.0 [INFO] [stderr] Checking lazy_static v1.4.0 [INFO] [stderr] Checking ppv-lite86 v0.2.16 [INFO] [stderr] Checking fastrand v1.8.0 [INFO] [stderr] Checking either v1.8.0 [INFO] [stderr] Checking regex-syntax v0.6.27 [INFO] [stderr] Checking tower-layer v0.3.2 [INFO] [stderr] Checking zeroize v1.5.7 [INFO] [stderr] Checking form_urlencoded v1.1.0 [INFO] [stderr] Checking aho-corasick v0.7.19 [INFO] [stderr] Compiling serde_json v1.0.87 [INFO] [stderr] Compiling rustc_version v0.4.0 [INFO] [stderr] Checking adler v1.0.2 [INFO] [stderr] Checking bitflags v1.3.2 [INFO] [stderr] Checking hex v0.4.3 [INFO] [stderr] Checking miniz_oxide v0.5.4 [INFO] [stderr] Compiling pkg-config v0.3.26 [INFO] [stderr] Checking mio v0.8.5 [INFO] [stderr] Checking signal-hook-registry v1.4.0 [INFO] [stderr] Checking num_cpus v1.14.0 [INFO] [stderr] Checking socket2 v0.4.7 [INFO] [stderr] Checking getrandom v0.2.8 [INFO] [stderr] Checking time v0.3.16 [INFO] [stderr] Compiling generic-array v0.14.6 [INFO] [stderr] Compiling thiserror v1.0.37 [INFO] [stderr] Checking rand_core v0.6.4 [INFO] [stderr] Checking time v0.1.44 [INFO] [stderr] Compiling aws-types v0.11.0 [INFO] [stderr] Checking iana-time-zone v0.1.53 [INFO] [stderr] Checking subtle v2.4.1 [INFO] [stderr] Checking flate2 v1.0.24 [INFO] [stderr] Checking noodles-core v0.6.0 [INFO] [stderr] Checking rand_chacha v0.3.1 [INFO] [stderr] Checking foreign-types-shared v0.1.1 [INFO] [stderr] Compiling openssl v0.10.42 [INFO] [stderr] Compiling native-tls v0.2.11 [INFO] [stderr] Checking xmlparser v0.13.3 [INFO] [stderr] Checking overload v0.1.1 [INFO] [stderr] Compiling fs_extra v1.2.0 [INFO] [stderr] Checking foreign-types v0.3.2 [INFO] [stderr] Compiling ring v0.16.20 [INFO] [stderr] Compiling async-trait v0.1.58 [INFO] [stderr] Checking rand v0.8.5 [INFO] [stderr] Checking tinyvec_macros v0.1.0 [INFO] [stderr] Checking nu-ansi-term v0.46.0 [INFO] [stderr] Checking dirs-sys-next v0.1.2 [INFO] [stderr] Checking tinyvec v1.6.0 [INFO] [stderr] Checking sharded-slab v0.1.4 [INFO] [stderr] Checking tracing-log v0.1.3 [INFO] [stderr] Checking thread_local v1.1.4 [INFO] [stderr] Checking hdrhistogram v7.5.2 [INFO] [stderr] Compiling openssl-sys v0.9.77 [INFO] [stderr] Checking bit-vec v0.6.3 [INFO] [stderr] Checking opaque-debug v0.3.0 [INFO] [stderr] Checking rustc-hash v1.1.0 [INFO] [stderr] Checking smallvec v1.10.0 [INFO] [stderr] Checking urlencoding v2.1.2 [INFO] [stderr] Compiling jemalloc-sys v0.3.2 [INFO] [stderr] Checking cpufeatures v0.2.5 [INFO] [stderr] Checking dirs-next v2.0.0 [INFO] [stderr] Checking waker-fn v1.1.0 [INFO] [stderr] Checking aws-smithy-types v0.41.0 [INFO] [stderr] Checking unicode-bidi v0.3.8 [INFO] [stderr] Checking shlex v1.1.0 [INFO] [stderr] Checking parking v2.0.0 [INFO] [stderr] Checking cache-padded v1.2.0 [INFO] [stderr] Checking event-listener v2.5.3 [INFO] [stderr] Compiling rusoto_core v0.47.0 [INFO] [stderr] Checking concurrent-queue v1.2.4 [INFO] [stderr] Checking futures-lite v1.12.0 [INFO] [stderr] Checking md5 v0.7.0 [INFO] [stderr] Checking async-channel v1.7.1 [INFO] [stderr] Compiling backtrace v0.3.66 [INFO] [stderr] Compiling async-fs v1.6.0 [INFO] [stderr] Checking xml-rs v0.8.4 [INFO] [stderr] Checking regex v1.6.0 [INFO] [stderr] Checking regex-automata v0.1.10 [INFO] [stderr] Checking aws-smithy-query v0.41.0 [INFO] [stderr] Checking unicode-normalization v0.1.22 [INFO] [stderr] Checking digest v0.9.0 [INFO] [stderr] Checking block-buffer v0.9.0 [INFO] [stderr] Checking crypto-common v0.1.6 [INFO] [stderr] Checking crypto-mac v0.11.1 [INFO] [stderr] Checking block-buffer v0.10.3 [INFO] [stderr] Checking aws-smithy-json v0.41.0 [INFO] [stderr] Checking sha2 v0.9.9 [INFO] [stderr] Checking hmac v0.11.0 [INFO] [stderr] Checking digest v0.10.5 [INFO] [stderr] Checking md-5 v0.9.1 [INFO] [stderr] Checking atomic-waker v1.0.0 [INFO] [stderr] Checking gimli v0.26.2 [INFO] [stderr] Checking async-task v4.3.0 [INFO] [stderr] Checking idna v0.3.0 [INFO] [stderr] Checking async-lock v2.6.0 [INFO] [stderr] Checking object v0.29.0 [INFO] [stderr] Checking path-dedot v3.0.18 [INFO] [stderr] Checking simd-abstraction v0.5.1 [INFO] [stderr] Checking minimal-lexical v0.2.1 [INFO] [stderr] Checking rustc-demangle v0.1.21 [INFO] [stderr] Checking blocking v1.2.0 [INFO] [stderr] Checking hex-simd v0.5.1 [INFO] [stderr] Checking nom v7.1.1 [INFO] [stderr] Checking path-absolutize v3.0.14 [INFO] [stderr] Checking sha2 v0.10.6 [INFO] [stderr] Checking hmac v0.12.1 [INFO] [stderr] Checking matchers v0.1.0 [INFO] [stderr] Checking md-5 v0.10.5 [INFO] [stderr] Checking uuid v0.8.2 [INFO] [stderr] Checking transform-stream v0.2.0 [INFO] [stderr] Checking mime v0.3.16 [INFO] [stderr] Checking url v2.3.1 [INFO] [stderr] Checking addr2line v0.17.0 [INFO] [stderr] Checking sct v0.6.1 [INFO] [stderr] Checking webpki v0.21.4 [INFO] [stderr] Checking ct-logs v0.8.0 [INFO] [stderr] Checking rustls v0.19.1 [INFO] [stderr] Compiling tokio-macros v1.8.0 [INFO] [stderr] Compiling tracing-attributes v0.1.23 [INFO] [stderr] Compiling futures-macro v0.3.25 [INFO] [stderr] Compiling pin-project-internal v1.0.12 [INFO] [stderr] Compiling thiserror-impl v1.0.37 [INFO] [stderr] Compiling openssl-macros v0.1.0 [INFO] [stderr] Compiling async-stream-impl v0.3.3 [INFO] [stderr] Compiling const-str-proc-macro v0.3.2 [INFO] [stderr] Checking rustls-native-certs v0.5.0 [INFO] [stderr] Checking async-stream v0.3.3 [INFO] [stderr] Checking const-str v0.3.2 [INFO] [stderr] Checking pin-project v1.0.12 [INFO] [stderr] Checking aws-smithy-xml v0.41.0 [INFO] [stderr] Checking tracing v0.1.37 [INFO] [stderr] Checking tracing-subscriber v0.3.16 [INFO] [stderr] Checking tracing-futures v0.2.5 [INFO] [stderr] Checking tracing-error v0.2.0 [INFO] [stderr] Checking futures-executor v0.3.25 [INFO] [stderr] Checking futures v0.3.25 [INFO] [stderr] Checking bytes v1.2.1 [INFO] [stderr] Checking chrono v0.4.22 [INFO] [stderr] Checking query_map v0.5.0 [INFO] [stderr] Checking serde_urlencoded v0.7.1 [INFO] [stderr] Checking quick-xml v0.22.0 [INFO] [stderr] Checking http v0.2.8 [INFO] [stderr] Checking aws-smithy-eventstream v0.41.0 [INFO] [stderr] Checking bytes-utils v0.1.3 [INFO] [stderr] Checking http-body v0.4.5 [INFO] [stderr] Checking http-serde v1.1.2 [INFO] [stderr] Checking aws_lambda_events v0.6.3 [INFO] [stderr] Checking tokio-util v0.7.4 [INFO] [stderr] Checking tokio-stream v0.1.11 [INFO] [stderr] Checking tokio-util v0.6.10 [INFO] [stderr] Checking tokio-rustls v0.22.0 [INFO] [stderr] Checking tokio-native-tls v0.3.0 [INFO] [stderr] Checking aws-smithy-async v0.41.0 [INFO] [stderr] Checking h2 v0.3.15 [INFO] [stderr] Checking tower v0.4.13 [INFO] [stderr] Checking noodles-bgzf v0.11.0 [INFO] [stderr] Checking noodles-fasta v0.10.0 [INFO] [stderr] Checking noodles-csi v0.6.0 [INFO] [stderr] Checking noodles-sam v0.15.0 [INFO] [stderr] Checking noodles-bam v0.18.0 [INFO] [stderr] Checking noodles v0.22.0 [INFO] [stderr] Checking hyper v0.14.22 [INFO] [stderr] Checking aws-smithy-http v0.41.0 [INFO] [stderr] Checking hyper-rustls v0.22.1 [INFO] [stderr] Checking lambda_runtime_api_client v0.5.0 [INFO] [stderr] Checking rusoto_credential v0.47.0 [INFO] [stderr] Checking hyper-tls v0.5.0 [INFO] [stderr] Checking lambda_runtime v0.5.1 [INFO] [stderr] Checking rusoto_signature v0.47.0 [INFO] [stderr] Checking aws-smithy-http-tower v0.41.0 [INFO] [stderr] Checking aws-sigv4 v0.11.0 [INFO] [stderr] Checking aws-smithy-client v0.41.0 [INFO] [stderr] Checking lambda_http v0.5.2 [INFO] [stderr] Checking rusoto_s3 v0.47.0 [INFO] [stderr] Checking aws-endpoint v0.11.0 [INFO] [stderr] Checking aws-http v0.11.0 [INFO] [stderr] Checking aws-sig-auth v0.11.0 [INFO] [stderr] Checking aws-sdk-sts v0.11.0 [INFO] [stderr] Checking aws-sdk-sso v0.11.0 [INFO] [stderr] Checking aws-sdk-s3 v0.11.0 [INFO] [stderr] Checking aws-config v0.11.0 [INFO] [stderr] Checking s3-server v0.2.0 [INFO] [stderr] Checking jemallocator v0.3.2 [INFO] [stderr] Checking s3-rust-noodles-bam v0.4.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 52.31s [INFO] running `Command { std: "docker" "inspect" "76e236e7ac1a48ae31085108f482af60b59a0b1e686758013f5ae03fb6c1b2ba", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "76e236e7ac1a48ae31085108f482af60b59a0b1e686758013f5ae03fb6c1b2ba", kill_on_drop: false }` [INFO] [stdout] 76e236e7ac1a48ae31085108f482af60b59a0b1e686758013f5ae03fb6c1b2ba