[INFO] fetching crate noodles-bcf 0.18.0... [INFO] testing noodles-bcf-0.18.0 against try#015dbcea68b7642e2acc268b5c8f3e9086fc02ff for pr-102570 [INFO] extracting crate noodles-bcf 0.18.0 into /workspace/builds/worker-6/source [INFO] validating manifest of crates.io crate noodles-bcf 0.18.0 on toolchain 015dbcea68b7642e2acc268b5c8f3e9086fc02ff [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+015dbcea68b7642e2acc268b5c8f3e9086fc02ff" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate noodles-bcf 0.18.0 [INFO] removed 0 missing examples [INFO] finished tweaking crates.io crate noodles-bcf 0.18.0 [INFO] tweaked toml for crates.io crate noodles-bcf 0.18.0 written to /workspace/builds/worker-6/source/Cargo.toml [INFO] crate crates.io crate noodles-bcf 0.18.0 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+015dbcea68b7642e2acc268b5c8f3e9086fc02ff" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:bb5b0feb4f87116a4ea905b7ff5bf5b85913db05e9f0fbc1abdd3168928d9075" "/opt/rustwide/cargo-home/bin/cargo" "+015dbcea68b7642e2acc268b5c8f3e9086fc02ff" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 7f8f95be0723d358477560652ce9d998b45d430e2a7480b8b841838e9434a4ad [INFO] running `Command { std: "docker" "start" "-a" "7f8f95be0723d358477560652ce9d998b45d430e2a7480b8b841838e9434a4ad", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "7f8f95be0723d358477560652ce9d998b45d430e2a7480b8b841838e9434a4ad", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "7f8f95be0723d358477560652ce9d998b45d430e2a7480b8b841838e9434a4ad", kill_on_drop: false }` [INFO] [stdout] 7f8f95be0723d358477560652ce9d998b45d430e2a7480b8b841838e9434a4ad [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:bb5b0feb4f87116a4ea905b7ff5bf5b85913db05e9f0fbc1abdd3168928d9075" "/opt/rustwide/cargo-home/bin/cargo" "+015dbcea68b7642e2acc268b5c8f3e9086fc02ff" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 5e326c9f3c7ba66f01aef3a2d5cc28dd731502bf3b6e197c26bb494659658669 [INFO] running `Command { std: "docker" "start" "-a" "5e326c9f3c7ba66f01aef3a2d5cc28dd731502bf3b6e197c26bb494659658669", kill_on_drop: false }` [INFO] [stderr] Compiling cfg-if v1.0.0 [INFO] [stderr] Compiling crc32fast v1.3.2 [INFO] [stderr] Compiling crossbeam-utils v0.8.12 [INFO] [stderr] Compiling adler v1.0.2 [INFO] [stderr] Compiling autocfg v1.1.0 [INFO] [stderr] Compiling bytes v1.2.1 [INFO] [stderr] Compiling memchr v2.5.0 [INFO] [stderr] Compiling byteorder v1.4.3 [INFO] [stderr] Compiling noodles-core v0.9.0 [INFO] [stderr] Compiling bit-vec v0.6.3 [INFO] [stderr] Compiling hashbrown v0.12.3 [INFO] [stderr] Compiling minimal-lexical v0.2.1 [INFO] [stderr] Compiling percent-encoding v2.2.0 [INFO] [stderr] Compiling miniz_oxide v0.5.4 [INFO] [stderr] Compiling indexmap v1.9.1 [INFO] [stderr] Compiling crossbeam-channel v0.5.6 [INFO] [stderr] Compiling flate2 v1.0.24 [INFO] [stderr] Compiling nom v7.1.1 [INFO] [stderr] Compiling noodles-bgzf v0.17.0 [INFO] [stderr] Compiling noodles-csi v0.11.0 [INFO] [stderr] Compiling noodles-tabix v0.14.0 [INFO] [stderr] Compiling noodles-vcf v0.21.0 [INFO] [stderr] Compiling noodles-bcf v0.18.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 11.06s [INFO] running `Command { std: "docker" "inspect" "5e326c9f3c7ba66f01aef3a2d5cc28dd731502bf3b6e197c26bb494659658669", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "5e326c9f3c7ba66f01aef3a2d5cc28dd731502bf3b6e197c26bb494659658669", kill_on_drop: false }` [INFO] [stdout] 5e326c9f3c7ba66f01aef3a2d5cc28dd731502bf3b6e197c26bb494659658669 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:bb5b0feb4f87116a4ea905b7ff5bf5b85913db05e9f0fbc1abdd3168928d9075" "/opt/rustwide/cargo-home/bin/cargo" "+015dbcea68b7642e2acc268b5c8f3e9086fc02ff" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 12aeaf0df24c8e7431ba7efd49dd4433230c999cee713f750259822aa4c5c23e [INFO] running `Command { std: "docker" "start" "-a" "12aeaf0df24c8e7431ba7efd49dd4433230c999cee713f750259822aa4c5c23e", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.47 [INFO] [stderr] Compiling unicode-ident v1.0.5 [INFO] [stderr] Compiling quote v1.0.21 [INFO] [stderr] Compiling syn v1.0.103 [INFO] [stderr] Compiling libc v0.2.137 [INFO] [stderr] Compiling tokio v1.21.2 [INFO] [stderr] Compiling pin-project-lite v0.2.9 [INFO] [stderr] Compiling num_cpus v1.13.1 [INFO] [stderr] Compiling tokio-macros v1.8.0 [INFO] [stderr] Compiling noodles-bcf v0.18.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 12.77s [INFO] running `Command { std: "docker" "inspect" "12aeaf0df24c8e7431ba7efd49dd4433230c999cee713f750259822aa4c5c23e", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "12aeaf0df24c8e7431ba7efd49dd4433230c999cee713f750259822aa4c5c23e", kill_on_drop: false }` [INFO] [stdout] 12aeaf0df24c8e7431ba7efd49dd4433230c999cee713f750259822aa4c5c23e [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:bb5b0feb4f87116a4ea905b7ff5bf5b85913db05e9f0fbc1abdd3168928d9075" "/opt/rustwide/cargo-home/bin/cargo" "+015dbcea68b7642e2acc268b5c8f3e9086fc02ff" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 6a6f5804dbd25c48cd047478f9cdccc8ae72beeba0c937d53d54f3b04f57783f [INFO] running `Command { std: "docker" "start" "-a" "6a6f5804dbd25c48cd047478f9cdccc8ae72beeba0c937d53d54f3b04f57783f", kill_on_drop: false }` [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.03s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/noodles_bcf-3d15e961dfdba9e1) [INFO] [stdout] [INFO] [stdout] running 76 tests [INFO] [stdout] test header::string_maps::tests::test_default ... ok [INFO] [stdout] test header::string_maps::tests::test_parse_file_format ... ok [INFO] [stdout] test reader::record::genotypes::tests::test_parse_genotype_genotype_field_values ... ok [INFO] [stdout] test header::string_maps::tests::test_vcf_header_for_string_map ... ok [INFO] [stdout] test reader::record::genotypes::tests::test_read_genotype_field_values_with_float_array_values ... ok [INFO] [stdout] test header::string_maps::tests::test_from_str_with_a_position_mismatch ... ok [INFO] [stdout] test header::string_maps::tests::test_from_str ... ok [INFO] [stdout] test header::string_maps::tests::test_from_str_with_mixed_positions ... ok [INFO] [stdout] test reader::record::genotypes::tests::test_read_genotype_field_values_with_float_values ... ok [INFO] [stdout] test reader::record::genotypes::tests::test_read_genotype_field_values_with_int16_values ... ok [INFO] [stdout] test reader::record::genotypes::tests::test_read_genotype_field_values_with_int16_array_values ... ok [INFO] [stdout] test reader::record::genotypes::tests::test_read_genotype_field_values_with_int32_array_values ... ok [INFO] [stdout] test reader::record::genotypes::tests::test_read_genotype_field_values_with_int32_values ... ok [INFO] [stdout] test reader::record::genotypes::tests::test_read_genotype_field_values_with_int8_array_values ... ok [INFO] [stdout] test reader::record::genotypes::tests::test_read_genotype_field_values_with_string_values ... ok [INFO] [stdout] test reader::record::genotypes::tests::test_read_genotype_field_values_with_int8_values ... ok [INFO] [stdout] test reader::record::info::tests::test_read_info_field_value_with_character_array_value ... ok [INFO] [stdout] test reader::record::info::tests::test_read_info_field_value_with_character_value ... ok [INFO] [stdout] test reader::record::info::tests::test_read_info_field_value_with_float_array_value ... ok [INFO] [stdout] test reader::record::info::tests::test_read_info_field_value_with_float_value ... ok [INFO] [stdout] test reader::record::info::tests::test_read_info_field_value_with_flag_value ... ok [INFO] [stdout] test reader::record::info::tests::test_read_info_field_value_with_integer_array_value ... ok [INFO] [stdout] test reader::record::info::tests::test_read_info_field_value_with_integer_value ... ok [INFO] [stdout] test reader::string_map::tests::test_read_string_map_index ... ok [INFO] [stdout] test reader::tests::test_read_format_version ... ok [INFO] [stdout] test reader::record::info::tests::test_read_info_field_value_with_string_value ... ok [INFO] [stdout] test reader::string_map::tests::test_read_string_map_indices ... ok [INFO] [stdout] test reader::tests::test_read_magic ... ok [INFO] [stdout] test reader::value::ty::tests::test_read_type_with_gt_14_values ... ok [INFO] [stdout] test reader::value::ty::tests::test_read_type ... ok [INFO] [stdout] test reader::tests::test_read_header ... ok [INFO] [stdout] test record::value::int16::tests::test_from_int16_for_i16 ... ok [INFO] [stdout] test record::value::int32::tests::test_from_i32_for_int32 ... ok [INFO] [stdout] test record::value::float::tests::test_from_float_for_f32 ... ok [INFO] [stdout] test record::value::float::tests::test_from_f32_for_float ... ok [INFO] [stdout] test record::value::int32::tests::test_from_int32_for_i32 ... ok [INFO] [stdout] test writer::record::tests::test_write_record ... ok [INFO] [stdout] test record::value::int8::tests::test_from_i8_for_int8 ... ok [INFO] [stdout] test writer::tests::test_write_file_format ... ok [INFO] [stdout] test record::value::int16::tests::test_from_i16_for_int16 ... ok [INFO] [stdout] test record::value::int8::tests::test_from_int8_for_i8 ... ok [INFO] [stdout] test writer::tests::test_write_header ... ok [INFO] [stdout] test writer::value::tests::test_write_value ... ok [INFO] [stdout] test writer::value::ty::tests::test_write_type ... ok [INFO] [stdout] test writer::string_map::tests::test_write_string_map_index ... ok [INFO] [stdout] test writer::vcf_record::genotypes::tests::test_write_genotype_field_values_with_float_array_values ... ok [INFO] [stdout] test writer::vcf_record::genotypes::tests::test_write_genotype_field_values_with_float_values ... ok [INFO] [stdout] test writer::value::ty::tests::test_write_type_with_gt_14_values ... ok [INFO] [stdout] test writer::string_map::tests::test_write_string_map_indices ... ok [INFO] [stdout] test writer::vcf_record::genotypes::tests::test_write_genotype_field_values_with_string_array_values ... ok [INFO] [stdout] test writer::vcf_record::genotypes::tests::test_write_genotype_field_values_with_integer_array_values ... ok [INFO] [stdout] test writer::vcf_record::genotypes::tests::test_write_genotype_field_values_with_integer_values ... ok [INFO] [stdout] test writer::vcf_record::genotypes::tests::test_write_genotype_field_values_with_character_values ... ok [INFO] [stdout] test writer::vcf_record::site::info::test::test_write_info_field_value_with_flag_value ... ok [INFO] [stdout] test writer::vcf_record::site::info::test::test_write_info_field_value_with_float_array_value ... ok [INFO] [stdout] test writer::vcf_record::site::info::test::test_write_info_field_value_with_float_value ... ok [INFO] [stdout] test writer::vcf_record::genotypes::tests::test_write_genotype_field_values_with_string_values ... ok [INFO] [stdout] test writer::vcf_record::site::info::test::test_write_info_field_value_with_character_array_value ... ok [INFO] [stdout] test writer::vcf_record::site::info::test::test_write_info_field_value_with_integer_array_value ... ok [INFO] [stdout] test reader::value::tests::test_read_value ... ok [INFO] [stdout] test writer::vcf_record::genotypes::tests::test_write_genotype_field_values_with_character_array_values ... ok [INFO] [stdout] test writer::vcf_record::site::info::test::test_write_info_field_value_with_character_value ... ok [INFO] [stdout] test writer::vcf_record::site::info::test::test_write_info_field_value_with_integer_value ... ok [INFO] [stdout] test writer::vcf_record::site::info::test::test_write_info_field_value_with_string_array_value ... ok [INFO] [stdout] test writer::vcf_record::site::tests::test_n_allele ... ok [INFO] [stdout] test writer::vcf_record::site::info::test::test_write_info_field_value_with_string_value ... ok [INFO] [stdout] test writer::vcf_record::site::tests::test_n_fmt_sample ... ok [INFO] [stdout] test writer::vcf_record::site::tests::test_write_chrom ... ok [INFO] [stdout] test writer::vcf_record::site::tests::test_write_id ... ok [INFO] [stdout] test writer::vcf_record::site::tests::test_write_filter ... ok [INFO] [stdout] test writer::vcf_record::site::tests::test_write_rlen ... ok [INFO] [stdout] test writer::vcf_record::site::tests::test_write_ref_alt ... ok [INFO] [stdout] test writer::vcf_record::site::tests::test_write_pos ... ok [INFO] [stdout] test writer::vcf_record::tests::test_write_vcf_record ... ok [INFO] [stdout] test reader::record::tests::test_read_record ... ok [INFO] [stdout] test writer::vcf_record::site::tests::test_write_qual ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 76 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s [INFO] [stdout] [INFO] [stderr] Doc-tests noodles-bcf [INFO] [stdout] [INFO] [stdout] running 52 tests [INFO] [stdout] test src/reader.rs - reader::Reader::read_file_format (line 88) - compile ... ok [INFO] [stdout] test src/reader.rs - reader::Reader>::seek (line 222) - compile ... ok [INFO] [stdout] test src/reader.rs - reader::Reader::records (line 155) - compile ... ok [INFO] [stdout] test src/reader.rs - reader::Reader::read_record (line 133) - compile ... ok [INFO] [stdout] test src/reader.rs - reader::Reader>::query (line 241) - compile ... ok [INFO] [stdout] test src/reader.rs - reader::Reader::read_header (line 109) - compile ... ok [INFO] [stdout] test src/reader.rs - reader::Reader::into_inner (line 68) ... ok [INFO] [stdout] test src/reader.rs - reader::Reader::get_ref (line 40) ... ok [INFO] [stdout] test src/reader.rs - reader::Reader::get_mut (line 54) ... ok [INFO] [stdout] test src/reader.rs - reader::Reader>::virtual_position (line 195) ... ok [INFO] [stdout] test src/reader.rs - reader::Reader>::new (line 182) ... ok [INFO] [stderr] error: doctest failed, to rerun pass `--doc` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `rustdoc --edition=2021 --crate-type lib --crate-name noodles_bcf --test /opt/rustwide/workdir/src/lib.rs -L dependency=/opt/rustwide/target/debug/deps -L dependency=/opt/rustwide/target/debug/deps --extern byteorder=/opt/rustwide/target/debug/deps/libbyteorder-4d098c56eb4115f5.rlib --extern indexmap=/opt/rustwide/target/debug/deps/libindexmap-7a5cc09d7b2b7e0a.rlib --extern noodles_bcf=/opt/rustwide/target/debug/deps/libnoodles_bcf-c59767721818e5ae.rlib --extern noodles_bgzf=/opt/rustwide/target/debug/deps/libnoodles_bgzf-3a939ca254eb0a33.rlib --extern noodles_core=/opt/rustwide/target/debug/deps/libnoodles_core-77f3041ecdbab50f.rlib --extern noodles_csi=/opt/rustwide/target/debug/deps/libnoodles_csi-cb6771138de1916a.rlib --extern noodles_vcf=/opt/rustwide/target/debug/deps/libnoodles_vcf-3fe06acea5205460.rlib --extern tokio=/opt/rustwide/target/debug/deps/libtokio-a8382ee622bd900c.rlib -C embed-bitcode=no --cap-lints=forbid --error-format human` (signal: 9, SIGKILL: kill) [INFO] running `Command { std: "docker" "inspect" "6a6f5804dbd25c48cd047478f9cdccc8ae72beeba0c937d53d54f3b04f57783f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "6a6f5804dbd25c48cd047478f9cdccc8ae72beeba0c937d53d54f3b04f57783f", kill_on_drop: false }` [INFO] [stdout] 6a6f5804dbd25c48cd047478f9cdccc8ae72beeba0c937d53d54f3b04f57783f