[INFO] cloning repository https://github.com/brainstorm/htsget-indexer
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/brainstorm/htsget-indexer" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbrainstorm%2Fhtsget-indexer", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbrainstorm%2Fhtsget-indexer'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 182650b6518cdeefad31ab1ca4aa5cb1666e0ab2
[INFO] checking brainstorm/htsget-indexer against master#4a0ee3cdc66573c8b46471462db7088a89d25183 for pr-102513
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbrainstorm%2Fhtsget-indexer" "/workspace/builds/worker-2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-2/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/brainstorm/htsget-indexer on toolchain 4a0ee3cdc66573c8b46471462db7088a89d25183
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+4a0ee3cdc66573c8b46471462db7088a89d25183" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/brainstorm/htsget-indexer
[INFO] finished tweaking git repo https://github.com/brainstorm/htsget-indexer
[INFO] tweaked toml for git repo https://github.com/brainstorm/htsget-indexer written to /workspace/builds/worker-2/source/Cargo.toml
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+4a0ee3cdc66573c8b46471462db7088a89d25183" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }`
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+4a0ee3cdc66573c8b46471462db7088a89d25183" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded bio-types v0.13.0
[INFO] [stderr]   Downloaded rust-htslib v0.26.1
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:824c28ce115f6b999260af6986f3384c158e782489540e41c0b698ca1d9fd927" "/opt/rustwide/cargo-home/bin/cargo" "+4a0ee3cdc66573c8b46471462db7088a89d25183" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] a7264c80627913fe873356e1740fe587be16b83efdf40bbffc59a9d6c5541736
[INFO] running `Command { std: "docker" "start" "-a" "a7264c80627913fe873356e1740fe587be16b83efdf40bbffc59a9d6c5541736", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "a7264c80627913fe873356e1740fe587be16b83efdf40bbffc59a9d6c5541736", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "a7264c80627913fe873356e1740fe587be16b83efdf40bbffc59a9d6c5541736", kill_on_drop: false }`
[INFO] [stdout] a7264c80627913fe873356e1740fe587be16b83efdf40bbffc59a9d6c5541736
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:824c28ce115f6b999260af6986f3384c158e782489540e41c0b698ca1d9fd927" "/opt/rustwide/cargo-home/bin/cargo" "+4a0ee3cdc66573c8b46471462db7088a89d25183" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 258f3196c2398c6a7f60af7d41d726ae88562f3c46e6181c6ccaf19247fc70b7
[INFO] running `Command { std: "docker" "start" "-a" "258f3196c2398c6a7f60af7d41d726ae88562f3c46e6181c6ccaf19247fc70b7", kill_on_drop: false }`
[INFO] [stderr]    Compiling cc v1.0.73
[INFO] [stderr]    Compiling proc-macro2 v1.0.46
[INFO] [stderr]    Compiling memchr v2.5.0
[INFO] [stderr]    Compiling quote v1.0.21
[INFO] [stderr]    Compiling unicode-ident v1.0.4
[INFO] [stderr]    Compiling libc v0.2.134
[INFO] [stderr]    Compiling syn v1.0.101
[INFO] [stderr]    Compiling pkg-config v0.3.25
[INFO] [stderr]    Compiling glob v0.3.0
[INFO] [stderr]    Compiling version_check v0.1.5
[INFO] [stderr]    Compiling quick-error v1.2.3
[INFO] [stderr]    Compiling proc-macro2 v0.4.30
[INFO] [stderr]    Compiling log v0.4.17
[INFO] [stderr]    Compiling cfg-if v1.0.0
[INFO] [stderr]    Compiling unicode-xid v0.1.0
[INFO] [stderr]    Compiling unicode-width v0.1.10
[INFO] [stderr]    Compiling regex-syntax v0.6.27
[INFO] [stderr]    Compiling humantime v1.3.0
[INFO] [stderr]    Compiling ansi_term v0.12.1
[INFO] [stderr]    Compiling textwrap v0.11.0
[INFO] [stderr]    Compiling bitflags v1.3.2
[INFO] [stderr]    Compiling doc-comment v0.3.3
[INFO] [stderr]    Compiling vec_map v0.8.2
[INFO] [stderr]    Compiling bindgen v0.51.1
[INFO] [stderr]    Compiling rustversion v1.0.9
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]    Compiling nom v4.2.3
[INFO] [stderr]    Compiling strsim v0.8.0
[INFO] [stderr]    Compiling syn v0.15.44
[INFO] [stderr]    Compiling clang-sys v0.28.1
[INFO] [stderr]    Compiling termcolor v1.1.3
[INFO] [stderr]     Checking tinyvec_macros v0.1.0
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]    Compiling quote v0.6.13
[INFO] [stderr]    Compiling aho-corasick v0.7.19
[INFO] [stderr]     Checking tinyvec v1.6.0
[INFO] [stderr]    Compiling serde_derive v1.0.145
[INFO] [stderr]    Compiling shlex v0.1.1
[INFO] [stderr]    Compiling peeking_take_while v0.1.2
[INFO] [stderr]    Compiling atty v0.2.14
[INFO] [stderr]    Compiling clap v2.34.0
[INFO] [stderr]    Compiling which v3.1.1
[INFO] [stderr]    Compiling lazy_static v1.4.0
[INFO] [stderr]    Compiling cfg-if v0.1.10
[INFO] [stderr]    Compiling thiserror v1.0.37
[INFO] [stderr]    Compiling rustc-hash v1.1.0
[INFO] [stderr]     Checking adler v1.0.2
[INFO] [stderr]     Checking gimli v0.26.2
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]     Checking object v0.29.0
[INFO] [stderr]     Checking miniz_oxide v0.5.4
[INFO] [stderr]    Compiling fs-utils v1.1.4
[INFO] [stderr]    Compiling libloading v0.5.2
[INFO] [stderr]    Compiling cexpr v0.3.6
[INFO] [stderr]    Compiling bzip2-sys v0.1.11+1.0.8
[INFO] [stderr]    Compiling backtrace v0.3.66
[INFO] [stderr]    Compiling lzma-sys v0.1.19
[INFO] [stderr]    Compiling regex v1.6.0
[INFO] [stderr]    Compiling libz-sys v1.1.8
[INFO] [stderr]     Checking unicode-normalization v0.1.22
[INFO] [stderr]     Checking percent-encoding v2.2.0
[INFO] [stderr]     Checking unicode-bidi v0.3.8
[INFO] [stderr]     Checking addr2line v0.17.0
[INFO] [stderr]    Compiling heck v0.4.0
[INFO] [stderr]    Compiling env_logger v0.6.2
[INFO] [stderr]    Compiling serde v1.0.145
[INFO] [stderr]     Checking rustc-demangle v0.1.21
[INFO] [stderr]     Checking idna v0.3.0
[INFO] [stderr]     Checking form_urlencoded v1.1.0
[INFO] [stderr]     Checking either v1.8.0
[INFO] [stderr]    Compiling serde_json v1.0.85
[INFO] [stderr]     Checking itertools v0.8.2
[INFO] [stderr]     Checking url v2.3.1
[INFO] [stderr]     Checking linear-map v1.2.0
[INFO] [stderr]     Checking itoa v1.0.3
[INFO] [stderr]     Checking custom_derive v0.1.7
[INFO] [stderr]     Checking ieee754 v0.2.6
[INFO] [stderr]     Checking ryu v1.0.11
[INFO] [stderr]    Compiling snafu-derive v0.5.0
[INFO] [stderr]    Compiling thiserror-impl v1.0.37
[INFO] [stderr]    Compiling strum_macros v0.24.3
[INFO] [stderr]    Compiling derive-new v0.5.9
[INFO] [stderr]    Compiling snafu-derive v0.6.10
[INFO] [stderr]    Compiling rust-htslib v0.26.1
[INFO] [stderr]     Checking snafu v0.6.10
[INFO] [stderr]     Checking bio-types v0.13.0
[INFO] [stderr]     Checking snafu v0.5.0
[INFO] [stderr]     Checking htsget-indexer v0.1.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 59.98s
[INFO] running `Command { std: "docker" "inspect" "258f3196c2398c6a7f60af7d41d726ae88562f3c46e6181c6ccaf19247fc70b7", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "258f3196c2398c6a7f60af7d41d726ae88562f3c46e6181c6ccaf19247fc70b7", kill_on_drop: false }`
[INFO] [stdout] 258f3196c2398c6a7f60af7d41d726ae88562f3c46e6181c6ccaf19247fc70b7