[INFO] cloning repository https://github.com/ormorni/bio_utils [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/ormorni/bio_utils" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Formorni%2Fbio_utils", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Formorni%2Fbio_utils'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] c41f1e42db2a238633814bed7e64f05c652fe7fa [INFO] checking ormorni/bio_utils against master#ceab6128fa48a616bfd3e3adf4bc80133b8ee223 for no-never-type-fallback [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Formorni%2Fbio_utils" "/workspace/builds/worker-3-tc1/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-3-tc1/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/ormorni/bio_utils on toolchain ceab6128fa48a616bfd3e3adf4bc80133b8ee223 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+ceab6128fa48a616bfd3e3adf4bc80133b8ee223" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/ormorni/bio_utils [INFO] finished tweaking git repo https://github.com/ormorni/bio_utils [INFO] tweaked toml for git repo https://github.com/ormorni/bio_utils written to /workspace/builds/worker-3-tc1/source/Cargo.toml [INFO] crate git repo https://github.com/ormorni/bio_utils already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+ceab6128fa48a616bfd3e3adf4bc80133b8ee223" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded strength_reduce v0.2.3 [INFO] [stderr] Downloaded primal-check v0.3.2 [INFO] [stderr] Downloaded wide v0.7.4 [INFO] [stderr] Downloaded libm v0.2.5 [INFO] [stderr] Downloaded nalgebra v0.31.1 [INFO] [stderr] Downloaded rustfft v6.0.1 [INFO] [stderr] Downloaded simba v0.7.2 [INFO] [stderr] Downloaded realfft v3.0.1 [INFO] [stderr] Downloaded transpose v0.2.1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+ceab6128fa48a616bfd3e3adf4bc80133b8ee223" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 30da369c90841c5eb6b54c45d634557c0a0434b3f9d022943dd7e8bf65233158 [INFO] running `Command { std: "docker" "start" "-a" "30da369c90841c5eb6b54c45d634557c0a0434b3f9d022943dd7e8bf65233158", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "30da369c90841c5eb6b54c45d634557c0a0434b3f9d022943dd7e8bf65233158", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "30da369c90841c5eb6b54c45d634557c0a0434b3f9d022943dd7e8bf65233158", kill_on_drop: false }` [INFO] [stdout] 30da369c90841c5eb6b54c45d634557c0a0434b3f9d022943dd7e8bf65233158 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+ceab6128fa48a616bfd3e3adf4bc80133b8ee223" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 930b96b3bf3cf02cbeaecd74ecce46b5c0b96513965387c4c2d79a2594d14608 [INFO] running `Command { std: "docker" "start" "-a" "930b96b3bf3cf02cbeaecd74ecce46b5c0b96513965387c4c2d79a2594d14608", kill_on_drop: false }` [INFO] [stderr] Compiling libm v0.2.5 [INFO] [stderr] Compiling num-traits v0.2.15 [INFO] [stderr] Checking cfg-if v1.0.0 [INFO] [stderr] Compiling libc v0.2.132 [INFO] [stderr] Compiling crossbeam-utils v0.8.11 [INFO] [stderr] Checking once_cell v1.14.0 [INFO] [stderr] Compiling crossbeam-epoch v0.9.10 [INFO] [stderr] Checking bytemuck v1.12.1 [INFO] [stderr] Checking scopeguard v1.1.0 [INFO] [stderr] Compiling num-integer v0.1.45 [INFO] [stderr] Compiling memoffset v0.6.5 [INFO] [stderr] Compiling memchr v2.5.0 [INFO] [stderr] Compiling proc-macro2 v1.0.43 [INFO] [stderr] Compiling rayon-core v1.9.3 [INFO] [stderr] Checking strength_reduce v0.2.3 [INFO] [stderr] Checking ppv-lite86 v0.2.16 [INFO] [stderr] Compiling typenum v1.15.0 [INFO] [stderr] Compiling num-rational v0.4.1 [INFO] [stderr] Checking either v1.8.0 [INFO] [stderr] Compiling paste v1.0.9 [INFO] [stderr] Checking rawpointer v0.2.1 [INFO] [stderr] Compiling rayon v1.5.3 [INFO] [stderr] Checking byteorder v1.4.3 [INFO] [stderr] Checking regex-syntax v0.6.27 [INFO] [stderr] Checking safe_arch v0.6.0 [INFO] [stderr] Checking itertools v0.10.4 [INFO] [stderr] Checking matrixmultiply v0.3.2 [INFO] [stderr] Checking lazy_static v1.4.0 [INFO] [stderr] Checking fxhash v0.2.1 [INFO] [stderr] Checking aho-corasick v0.7.19 [INFO] [stderr] Compiling quote v1.0.21 [INFO] [stderr] Checking crossbeam-channel v0.5.6 [INFO] [stderr] Checking wide v0.7.4 [INFO] [stderr] Compiling syn v1.0.99 [INFO] [stderr] Checking crossbeam-deque v0.8.2 [INFO] [stderr] Checking getrandom v0.2.7 [INFO] [stderr] Checking num_cpus v1.13.1 [INFO] [stderr] Checking rand_core v0.6.4 [INFO] [stderr] Checking uuid v1.1.2 [INFO] [stderr] Checking rand_chacha v0.3.1 [INFO] [stderr] Checking rand v0.8.5 [INFO] [stderr] Checking num-complex v0.4.2 [INFO] [stderr] Checking approx v0.5.1 [INFO] [stderr] Checking primal-check v0.3.2 [INFO] [stderr] Checking transpose v0.2.1 [INFO] [stderr] Checking rustfft v6.0.1 [INFO] [stderr] Checking simba v0.7.2 [INFO] [stderr] Checking rand_distr v0.4.3 [INFO] [stderr] Checking regex v1.6.0 [INFO] [stderr] Compiling nalgebra-macros v0.1.0 [INFO] [stderr] Checking realfft v3.0.1 [INFO] [stderr] Checking nalgebra v0.31.1 [INFO] [stderr] Checking bio_utils v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused import: `Lines` [INFO] [stdout] --> src/alignment/parsers.rs:2:64 [INFO] [stdout] | [INFO] [stdout] 2 | use std::io::{BufRead, BufReader, BufWriter, Error, ErrorKind, Lines, Read, Write}; [INFO] [stdout] | ^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `Float` [INFO] [stdout] --> src/distributions/conv.rs:3:27 [INFO] [stdout] | [INFO] [stdout] 3 | use realfft::num_traits::{Float, FromPrimitive, Zero}; [INFO] [stdout] | ^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `Lines` [INFO] [stdout] --> src/alignment/parsers.rs:2:64 [INFO] [stdout] | [INFO] [stdout] 2 | use std::io::{BufRead, BufReader, BufWriter, Error, ErrorKind, Lines, Read, Write}; [INFO] [stdout] | ^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `Float` [INFO] [stdout] --> src/distributions/conv.rs:3:27 [INFO] [stdout] | [INFO] [stdout] 3 | use realfft::num_traits::{Float, FromPrimitive, Zero}; [INFO] [stdout] | ^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `name_length` [INFO] [stdout] --> src/alignment/parsers.rs:86:17 [INFO] [stdout] | [INFO] [stdout] 86 | let name_length = reader.read_until(b'\n', &mut self.buf).unwrap(); [INFO] [stdout] | ^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_name_length` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: enum `FastaIterState` is never used [INFO] [stdout] --> src/alignment/parsers.rs:43:6 [INFO] [stdout] | [INFO] [stdout] 43 | enum FastaIterState { [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `name_length` [INFO] [stdout] --> src/alignment/parsers.rs:86:17 [INFO] [stdout] | [INFO] [stdout] 86 | let name_length = reader.read_until(b'\n', &mut self.buf).unwrap(); [INFO] [stdout] | ^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_name_length` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: enum `FastaIterState` is never used [INFO] [stdout] --> src/alignment/parsers.rs:43:6 [INFO] [stdout] | [INFO] [stdout] 43 | enum FastaIterState { [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 4 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 4 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [optimized + debuginfo] target(s) in 9.21s [INFO] running `Command { std: "docker" "inspect" "930b96b3bf3cf02cbeaecd74ecce46b5c0b96513965387c4c2d79a2594d14608", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "930b96b3bf3cf02cbeaecd74ecce46b5c0b96513965387c4c2d79a2594d14608", kill_on_drop: false }` [INFO] [stdout] 930b96b3bf3cf02cbeaecd74ecce46b5c0b96513965387c4c2d79a2594d14608 [INFO] checking ormorni/bio_utils against try#3a4bc97f6385a3aa300a4fd689b44350e54fd676 for no-never-type-fallback [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Formorni%2Fbio_utils" "/workspace/builds/worker-3-tc2/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-3-tc2/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/ormorni/bio_utils on toolchain 3a4bc97f6385a3aa300a4fd689b44350e54fd676 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+3a4bc97f6385a3aa300a4fd689b44350e54fd676" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/ormorni/bio_utils [INFO] finished tweaking git repo https://github.com/ormorni/bio_utils [INFO] tweaked toml for git repo https://github.com/ormorni/bio_utils written to /workspace/builds/worker-3-tc2/source/Cargo.toml [INFO] crate git repo https://github.com/ormorni/bio_utils already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+3a4bc97f6385a3aa300a4fd689b44350e54fd676" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+3a4bc97f6385a3aa300a4fd689b44350e54fd676" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 96ec08f49a519b4387257fbba42246852e834f36d871c66ab8e0f516bdba8d3c [INFO] running `Command { std: "docker" "start" "-a" "96ec08f49a519b4387257fbba42246852e834f36d871c66ab8e0f516bdba8d3c", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "96ec08f49a519b4387257fbba42246852e834f36d871c66ab8e0f516bdba8d3c", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "96ec08f49a519b4387257fbba42246852e834f36d871c66ab8e0f516bdba8d3c", kill_on_drop: false }` [INFO] [stdout] 96ec08f49a519b4387257fbba42246852e834f36d871c66ab8e0f516bdba8d3c [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+3a4bc97f6385a3aa300a4fd689b44350e54fd676" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 5266652ad9084367f681c1dfdc42e944d3a157e4f0bbac2a66cf3bc2d21431cb [INFO] running `Command { std: "docker" "start" "-a" "5266652ad9084367f681c1dfdc42e944d3a157e4f0bbac2a66cf3bc2d21431cb", kill_on_drop: false }` [INFO] [stderr] Compiling libm v0.2.5 [INFO] [stderr] Compiling num-traits v0.2.15 [INFO] [stderr] Checking cfg-if v1.0.0 [INFO] [stderr] Compiling libc v0.2.132 [INFO] [stderr] Compiling crossbeam-utils v0.8.11 [INFO] [stderr] Checking once_cell v1.14.0 [INFO] [stderr] Compiling crossbeam-epoch v0.9.10 [INFO] [stderr] Checking bytemuck v1.12.1 [INFO] [stderr] Checking scopeguard v1.1.0 [INFO] [stderr] Compiling num-integer v0.1.45 [INFO] [stderr] Compiling memoffset v0.6.5 [INFO] [stderr] Compiling rayon-core v1.9.3 [INFO] [stderr] Compiling proc-macro2 v1.0.43 [INFO] [stderr] Compiling memchr v2.5.0 [INFO] [stderr] Checking ppv-lite86 v0.2.16 [INFO] [stderr] Checking strength_reduce v0.2.3 [INFO] [stderr] Compiling num-rational v0.4.1 [INFO] [stderr] Compiling typenum v1.15.0 [INFO] [stderr] Compiling paste v1.0.9 [INFO] [stderr] Checking either v1.8.0 [INFO] [stderr] Checking rawpointer v0.2.1 [INFO] [stderr] Compiling rayon v1.5.3 [INFO] [stderr] Checking byteorder v1.4.3 [INFO] [stderr] Checking regex-syntax v0.6.27 [INFO] [stderr] Checking safe_arch v0.6.0 [INFO] [stderr] Checking matrixmultiply v0.3.2 [INFO] [stderr] Checking itertools v0.10.4 [INFO] [stderr] Checking lazy_static v1.4.0 [INFO] [stderr] Checking fxhash v0.2.1 [INFO] [stderr] Compiling quote v1.0.21 [INFO] [stdout] error[E0282]: type annotations needed [INFO] [stdout] --> /opt/rustwide/cargo-home/registry/src/index.crates.io-6f17d22bba15001f/crossbeam-utils-0.8.11/src/sync/parker.rs:368:25 [INFO] [stdout] | [INFO] [stdout] 368 | / match self.state.swap(EMPTY, SeqCst) { [INFO] [stdout] 369 | | NOTIFIED | PARKED => return, [INFO] [stdout] 370 | | n => panic!("inconsistent park_timeout state: {}", n), [INFO] [stdout] 371 | | }; [INFO] [stdout] | |_________________________^ cannot infer type [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Checking aho-corasick v0.7.19 [INFO] [stderr] Checking wide v0.7.4 [INFO] [stdout] error: aborting due to 1 previous error [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] For more information about this error, try `rustc --explain E0282`. [INFO] [stdout] [INFO] [stderr] error: could not compile `crossbeam-utils` (lib) due to 2 previous errors [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] running `Command { std: "docker" "inspect" "5266652ad9084367f681c1dfdc42e944d3a157e4f0bbac2a66cf3bc2d21431cb", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "5266652ad9084367f681c1dfdc42e944d3a157e4f0bbac2a66cf3bc2d21431cb", kill_on_drop: false }` [INFO] [stdout] 5266652ad9084367f681c1dfdc42e944d3a157e4f0bbac2a66cf3bc2d21431cb