[INFO] fetching crate rustynuc 0.3.0... [INFO] testing rustynuc-0.3.0 against try#8de4c7234dd9b97c9d76b58671343fdbbc9a433e+target=x86_64-unknown-linux-musl for musl_upgrade_1_2_5_with_libc_patch_0 [INFO] extracting crate rustynuc 0.3.0 into /workspace/builds/worker-5-tc1/source [INFO] started tweaking crates.io crate rustynuc 0.3.0 [INFO] finished tweaking crates.io crate rustynuc 0.3.0 [INFO] tweaked toml for crates.io crate rustynuc 0.3.0 written to /workspace/builds/worker-5-tc1/source/Cargo.toml [INFO] validating manifest of crates.io crate rustynuc 0.3.0 on toolchain 8de4c7234dd9b97c9d76b58671343fdbbc9a433e [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate rustynuc 0.3.0 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded multimap v0.6.0 [INFO] [stderr] Downloaded bio-types v0.7.0 [INFO] [stderr] Downloaded assert_cmd v1.0.2 [INFO] [stderr] Downloaded niffler v2.2.0 [INFO] [stderr] Downloaded bio v0.30.1 [INFO] [stderr] Downloaded rust-htslib v0.31.0 [INFO] [stderr] Downloaded syn v1.0.53 [INFO] [stderr] Downloaded hts-sys v1.10.3 [INFO] [stderr] Downloaded fishers_exact v1.0.1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:90999bfc7ae267e83380e433d8e61a7c072ca6729e92edbae886d3423b3a6f4c" "/opt/rustwide/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 7739679da5b08393f76671160de60ce17afb1ca0b61b8b91692766a2f7bf537b [INFO] running `Command { std: "docker" "start" "-a" "7739679da5b08393f76671160de60ce17afb1ca0b61b8b91692766a2f7bf537b", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "7739679da5b08393f76671160de60ce17afb1ca0b61b8b91692766a2f7bf537b", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "7739679da5b08393f76671160de60ce17afb1ca0b61b8b91692766a2f7bf537b", kill_on_drop: false }` [INFO] [stdout] 7739679da5b08393f76671160de60ce17afb1ca0b61b8b91692766a2f7bf537b [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:90999bfc7ae267e83380e433d8e61a7c072ca6729e92edbae886d3423b3a6f4c" "/opt/rustwide/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "build" "--frozen" "--message-format=json" "--target" "x86_64-unknown-linux-musl", kill_on_drop: false }` [INFO] [stdout] 089352a2003c7a4c44d8006635514e296ccba25657163f6d90e4aaea50e5c68f [INFO] running `Command { std: "docker" "start" "-a" "089352a2003c7a4c44d8006635514e296ccba25657163f6d90e4aaea50e5c68f", kill_on_drop: false }` [INFO] [stderr] Compiling autocfg v1.0.1 [INFO] [stderr] Compiling libc v0.2.80 [INFO] [stderr] Compiling proc-macro2 v1.0.24 [INFO] [stderr] Compiling unicode-xid v0.2.1 [INFO] [stderr] Compiling syn v1.0.53 [INFO] [stderr] Compiling serde_derive v1.0.118 [INFO] [stderr] Compiling serde v1.0.118 [INFO] [stderr] Compiling memchr v2.3.4 [INFO] [stderr] Compiling version_check v0.9.2 [INFO] [stderr] Compiling byteorder v1.3.4 [INFO] [stderr] Compiling getrandom v0.1.15 [INFO] [stderr] Compiling const_fn v0.4.3 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling pkg-config v0.3.19 [INFO] [stderr] Compiling unicode-segmentation v1.7.1 [INFO] [stderr] Compiling matches v0.1.8 [INFO] [stderr] Compiling quick-error v1.2.3 [INFO] [stderr] Compiling tinyvec_macros v0.1.0 [INFO] [stderr] Compiling tinyvec v1.1.0 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling fs-utils v1.1.4 [INFO] [stderr] Compiling thread_local v1.0.1 [INFO] [stderr] Compiling bitflags v1.2.1 [INFO] [stderr] Compiling heck v0.3.1 [INFO] [stderr] Compiling proc-macro-error-attr v1.0.4 [INFO] [stderr] Compiling proc-macro-error v1.0.4 [INFO] [stderr] Compiling scopeguard v1.1.0 [INFO] [stderr] Compiling aho-corasick v0.7.15 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling regex-syntax v0.6.21 [INFO] [stderr] Compiling num-traits v0.2.14 [INFO] [stderr] Compiling crossbeam-utils v0.8.1 [INFO] [stderr] Compiling memoffset v0.6.1 [INFO] [stderr] Compiling num-integer v0.1.44 [INFO] [stderr] Compiling miniz_oxide v0.4.3 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling glob v0.3.0 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Compiling rayon-core v1.9.0 [INFO] [stderr] Compiling quote v1.0.7 [INFO] [stderr] Compiling jobserver v0.1.21 [INFO] [stderr] Compiling ppv-lite86 v0.2.10 [INFO] [stderr] Compiling doc-comment v0.3.3 [INFO] [stderr] Compiling ryu v1.0.5 [INFO] [stderr] Compiling crc32fast v1.2.1 [INFO] [stderr] Compiling rand_core v0.5.1 [INFO] [stderr] Compiling bv v0.11.1 [INFO] [stderr] Compiling unicode-normalization v0.1.16 [INFO] [stderr] Compiling cc v1.0.66 [INFO] [stderr] Compiling rand_chacha v0.2.2 [INFO] [stderr] Compiling regex-automata v0.1.9 [INFO] [stderr] Compiling unicode-bidi v0.3.4 [INFO] [stderr] Compiling rawpointer v0.2.1 [INFO] [stderr] Compiling log v0.4.11 [INFO] [stderr] Compiling crossbeam-epoch v0.9.1 [INFO] [stderr] Compiling adler v0.2.3 [INFO] [stderr] Compiling ndarray v0.13.1 [INFO] [stderr] Compiling either v1.6.1 [INFO] [stderr] Compiling percent-encoding v2.1.0 [INFO] [stderr] Compiling unicode-width v0.1.8 [INFO] [stderr] Compiling form_urlencoded v1.0.0 [INFO] [stderr] Compiling matrixmultiply v0.2.3 [INFO] [stderr] Compiling textwrap v0.11.0 [INFO] [stderr] Compiling rand v0.7.3 [INFO] [stderr] Compiling crossbeam-deque v0.8.0 [INFO] [stderr] Compiling num-traits v0.1.43 [INFO] [stderr] Compiling idna v0.2.0 [INFO] [stderr] Compiling crossbeam-channel v0.5.0 [INFO] [stderr] Compiling num_cpus v1.13.0 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling rayon v1.5.0 [INFO] [stderr] Compiling csv-core v0.1.10 [INFO] [stderr] Compiling strsim v0.8.0 [INFO] [stderr] Compiling ordermap v0.3.5 [INFO] [stderr] Compiling ansi_term v0.11.0 [INFO] [stderr] Compiling fixedbitset v0.1.9 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling bio v0.30.1 [INFO] [stderr] Compiling bit-vec v0.6.3 [INFO] [stderr] Compiling itoa v0.4.6 [INFO] [stderr] Compiling url v2.2.0 [INFO] [stderr] Compiling flate2 v1.0.19 [INFO] [stderr] Compiling regex v1.4.2 [INFO] [stderr] Compiling petgraph v0.4.13 [INFO] [stderr] Compiling enum_primitive v0.1.1 [INFO] [stderr] Compiling ordered-float v1.1.0 [INFO] [stderr] Compiling bit-set v0.5.2 [INFO] [stderr] Compiling approx v0.3.2 [INFO] [stderr] Compiling statrs v0.12.0 [INFO] [stderr] Compiling itertools-num v0.1.3 [INFO] [stderr] Compiling libz-sys v1.1.2 [INFO] [stderr] Compiling hts-sys v1.10.3 [INFO] [stderr] Compiling itertools v0.9.0 [INFO] [stderr] Compiling fxhash v0.2.1 [INFO] [stderr] Compiling bytecount v0.6.2 [INFO] [stderr] Compiling linear-map v1.2.0 [INFO] [stderr] Compiling ieee754 v0.2.6 [INFO] [stderr] Compiling strum v0.18.0 [INFO] [stderr] Compiling fishers_exact v1.0.1 [INFO] [stderr] Compiling env_logger v0.7.1 [INFO] [stderr] Compiling thiserror-impl v1.0.22 [INFO] [stderr] Compiling derive-new v0.5.8 [INFO] [stderr] Compiling snafu-derive v0.6.10 [INFO] [stderr] Compiling getset v0.0.9 [INFO] [stderr] Compiling structopt-derive v0.4.14 [INFO] [stderr] Compiling strum_macros v0.18.0 [INFO] [stderr] Compiling thiserror v1.0.22 [INFO] [stderr] Compiling niffler v2.2.0 [INFO] [stderr] Compiling snafu v0.6.10 [INFO] [stderr] Compiling vec_map v0.8.2 [INFO] [stderr] Compiling bio-types v0.7.0 [INFO] [stderr] Compiling bstr v0.2.14 [INFO] [stderr] Compiling multimap v0.6.0 [INFO] [stderr] Compiling clap v2.33.3 [INFO] [stderr] Compiling rust-htslib v0.31.0 [INFO] [stderr] Compiling csv v1.1.5 [INFO] [stderr] Compiling structopt v0.3.21 [INFO] [stderr] Compiling rustynuc v0.3.0 (/opt/rustwide/workdir) [INFO] [stdout] error: struct `NucleotideCount` is never constructed [INFO] [stdout] --> src/alignment.rs:66:12 [INFO] [stdout] | [INFO] [stdout] 66 | pub struct NucleotideCount(pub HashMap); [INFO] [stdout] | ^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `NucleotideCount` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stdout] note: the lint level is defined here [INFO] [stdout] --> src/alignment.rs:2:20 [INFO] [stdout] | [INFO] [stdout] 2 | #![deny(dead_code, unused)] [INFO] [stdout] | ^^^^^^ [INFO] [stdout] = note: `#[deny(dead_code)]` implied by `#[deny(unused)]` [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] error: could not compile `rustynuc` (bin "rustynuc") due to 1 previous error [INFO] running `Command { std: "docker" "inspect" "089352a2003c7a4c44d8006635514e296ccba25657163f6d90e4aaea50e5c68f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "089352a2003c7a4c44d8006635514e296ccba25657163f6d90e4aaea50e5c68f", kill_on_drop: false }` [INFO] [stdout] 089352a2003c7a4c44d8006635514e296ccba25657163f6d90e4aaea50e5c68f