[INFO] fetching crate rustybam 0.1.34... [INFO] testing rustybam-0.1.34 against try#8de4c7234dd9b97c9d76b58671343fdbbc9a433e+target=x86_64-unknown-linux-musl for musl_upgrade_1_2_5_with_libc_patch_0 [INFO] extracting crate rustybam 0.1.34 into /workspace/builds/worker-1-tc1/source [INFO] removed /workspace/builds/worker-1-tc1/source/.cargo/config.toml [INFO] started tweaking crates.io crate rustybam 0.1.34 [INFO] finished tweaking crates.io crate rustybam 0.1.34 [INFO] tweaked toml for crates.io crate rustybam 0.1.34 written to /workspace/builds/worker-1-tc1/source/Cargo.toml [INFO] validating manifest of crates.io crate rustybam 0.1.34 on toolchain 8de4c7234dd9b97c9d76b58671343fdbbc9a433e [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate rustybam 0.1.34 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] warning: file `/workspace/builds/worker-1-tc1/source/src/main.rs` found to be present in multiple build targets: [INFO] [stderr] * `bin` target `rb` [INFO] [stderr] * `bin` target `rustybam` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Updating crates.io index [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded fs-utils v1.1.4 [INFO] [stderr] Downloaded derive-new v0.5.9 [INFO] [stderr] Downloaded linear-map v1.2.0 [INFO] [stderr] Downloaded nalgebra-macros v0.1.0 [INFO] [stderr] Downloaded niffler v2.7.0 [INFO] [stderr] Downloaded calmio_filters v0.1.0 [INFO] [stderr] Downloaded calm_io v0.1.1 [INFO] [stderr] Downloaded clap_complete v3.2.5 [INFO] [stderr] Downloaded core_affinity v0.8.3 [INFO] [stderr] Downloaded multimap v0.9.1 [INFO] [stderr] Downloaded clap_derive v3.2.25 [INFO] [stderr] Downloaded simba v0.6.0 [INFO] [stderr] Downloaded bio-io v0.3.2 [INFO] [stderr] Downloaded rust-htslib v0.44.1 [INFO] [stderr] Downloaded needletail v0.5.1 [INFO] [stderr] Downloaded snap v1.1.1 [INFO] [stderr] Downloaded statrs v0.16.1 [INFO] [stderr] Downloaded libdeflater v0.12.0 [INFO] [stderr] Downloaded bio v1.6.0 [INFO] [stderr] Downloaded libdeflate-sys v0.12.0 [INFO] [stderr] Downloaded ndarray v0.15.6 [INFO] [stderr] Downloaded nalgebra v0.29.0 [INFO] [stderr] Downloaded gzp v0.11.3 [INFO] [stderr] Downloaded hts-sys v2.2.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:90999bfc7ae267e83380e433d8e61a7c072ca6729e92edbae886d3423b3a6f4c" "/opt/rustwide/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 8ce03a0cfb866264e23b22ce00b0fb8791297f19d5a6db952bed4921806daa30 [INFO] running `Command { std: "docker" "start" "-a" "8ce03a0cfb866264e23b22ce00b0fb8791297f19d5a6db952bed4921806daa30", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "8ce03a0cfb866264e23b22ce00b0fb8791297f19d5a6db952bed4921806daa30", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "8ce03a0cfb866264e23b22ce00b0fb8791297f19d5a6db952bed4921806daa30", kill_on_drop: false }` [INFO] [stdout] 8ce03a0cfb866264e23b22ce00b0fb8791297f19d5a6db952bed4921806daa30 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:90999bfc7ae267e83380e433d8e61a7c072ca6729e92edbae886d3423b3a6f4c" "/opt/rustwide/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "build" "--frozen" "--message-format=json" "--target" "x86_64-unknown-linux-musl", kill_on_drop: false }` [INFO] [stdout] ad7b0c85b92c90130205b7f42b99ec754f949d28b9ecfaf3411a669fccc67a05 [INFO] running `Command { std: "docker" "start" "-a" "ad7b0c85b92c90130205b7f42b99ec754f949d28b9ecfaf3411a669fccc67a05", kill_on_drop: false }` [INFO] [stderr] warning: file `/opt/rustwide/workdir/src/main.rs` found to be present in multiple build targets: [INFO] [stderr] * `bin` target `rb` [INFO] [stderr] * `bin` target `rustybam` [INFO] [stderr] Compiling libc v0.2.171 [INFO] [stderr] Compiling syn v1.0.109 [INFO] [stderr] Compiling icu_locid_transform_data v1.5.1 [INFO] [stderr] Compiling num-traits v0.2.19 [INFO] [stderr] Compiling indexmap v1.9.3 [INFO] [stderr] Compiling zerocopy v0.8.24 [INFO] [stderr] Compiling icu_properties_data v1.5.1 [INFO] [stderr] Compiling icu_normalizer_data v1.5.1 [INFO] [stderr] Compiling quote v1.0.40 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling matrixmultiply v0.3.9 [INFO] [stderr] Compiling bytemuck v1.22.0 [INFO] [stderr] Compiling quick-error v1.2.3 [INFO] [stderr] Compiling smallvec v1.15.0 [INFO] [stderr] Compiling crossbeam-epoch v0.9.18 [INFO] [stderr] Compiling rawpointer v0.2.1 [INFO] [stderr] Compiling regex-syntax v0.8.5 [INFO] [stderr] Compiling fs-utils v1.1.4 [INFO] [stderr] Compiling safe_arch v0.7.4 [INFO] [stderr] Compiling os_str_bytes v6.6.1 [INFO] [stderr] Compiling hashbrown v0.12.3 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling clap_lex v0.2.4 [INFO] [stderr] Compiling crossbeam-deque v0.8.6 [INFO] [stderr] Compiling strsim v0.10.0 [INFO] [stderr] Compiling syn v2.0.100 [INFO] [stderr] Compiling snap v1.1.1 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling proc-macro-error-attr v1.0.4 [INFO] [stderr] Compiling textwrap v0.16.2 [INFO] [stderr] Compiling bitflags v1.3.2 [INFO] [stderr] Compiling wide v0.7.32 [INFO] [stderr] Compiling bv v0.11.1 [INFO] [stderr] Compiling rayon-core v1.12.1 [INFO] [stderr] Compiling humantime v2.2.0 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling log v0.4.27 [INFO] [stderr] Compiling unicode-width v0.2.0 [INFO] [stderr] Compiling futures-core v0.3.31 [INFO] [stderr] Compiling num-complex v0.4.6 [INFO] [stderr] Compiling num-integer v0.1.46 [INFO] [stderr] Compiling approx v0.5.1 [INFO] [stderr] Compiling indexmap v2.9.0 [INFO] [stderr] Compiling rayon v1.10.0 [INFO] [stderr] Compiling jobserver v0.1.33 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling regex-automata v0.4.9 [INFO] [stderr] Compiling csv-core v0.1.12 [INFO] [stderr] Compiling linear-map v1.2.0 [INFO] [stderr] Compiling getrandom v0.2.15 [INFO] [stderr] Compiling num_cpus v1.16.0 [INFO] [stderr] Compiling num-rational v0.4.2 [INFO] [stderr] Compiling console v0.15.11 [INFO] [stderr] Compiling cc v1.2.19 [INFO] [stderr] Compiling core_affinity v0.8.3 [INFO] [stderr] Compiling rand_core v0.6.4 [INFO] [stderr] Compiling nanorand v0.7.0 [INFO] [stderr] Compiling fixedbitset v0.4.2 [INFO] [stderr] Compiling number_prefix v0.4.0 [INFO] [stderr] Compiling ieee754 v0.2.6 [INFO] [stderr] Compiling bytecount v0.6.8 [INFO] [stderr] Compiling petgraph v0.6.5 [INFO] [stderr] Compiling ndarray v0.15.6 [INFO] [stderr] Compiling simba v0.6.0 [INFO] [stderr] Compiling proc-macro-error v1.0.4 [INFO] [stderr] Compiling ppv-lite86 v0.2.21 [INFO] [stderr] Compiling itertools-num v0.1.3 [INFO] [stderr] Compiling ordered-float v3.9.2 [INFO] [stderr] Compiling fxhash v0.2.1 [INFO] [stderr] Compiling colored v2.2.0 [INFO] [stderr] Compiling itertools v0.11.0 [INFO] [stderr] Compiling buffer-redux v1.0.2 [INFO] [stderr] Compiling triple_accel v0.4.0 [INFO] [stderr] Compiling arrayvec v0.7.6 [INFO] [stderr] Compiling editdistancek v1.0.2 [INFO] [stderr] Compiling cmake v0.1.54 [INFO] [stderr] Compiling openssl-src v300.5.0+3.5.0 [INFO] [stderr] Compiling rand_chacha v0.3.1 [INFO] [stderr] Compiling strum v0.25.0 [INFO] [stderr] Compiling env_logger v0.9.3 [INFO] [stderr] Compiling num-format v0.4.4 [INFO] [stderr] Compiling rand v0.8.5 [INFO] [stderr] Compiling regex v1.11.1 [INFO] [stderr] Compiling indicatif v0.17.11 [INFO] [stderr] Compiling chrono v0.4.40 [INFO] [stderr] Compiling bimap v0.6.3 [INFO] [stderr] Compiling natord v1.0.9 [INFO] [stderr] Compiling synstructure v0.13.1 [INFO] [stderr] Compiling rand_distr v0.4.3 [INFO] [stderr] Compiling libz-sys v1.1.22 [INFO] [stderr] Compiling bzip2-sys v0.1.13+1.0.8 [INFO] [stderr] Compiling lzma-sys v0.1.20 [INFO] [stderr] Compiling openssl-sys v0.9.107 [INFO] [stderr] Compiling curl-sys v0.4.80+curl-8.12.1 [INFO] [stderr] Compiling libdeflate-sys v0.12.0 [INFO] [stderr] Compiling hts-sys v2.2.0 [INFO] [stderr] Compiling clap_derive v3.2.25 [INFO] [stderr] Compiling nalgebra-macros v0.1.0 [INFO] [stderr] Compiling derive-new v0.5.9 [INFO] [stderr] Compiling calmio_filters v0.1.0 [INFO] [stderr] Compiling calm_io v0.1.1 [INFO] [stderr] Compiling zerofrom-derive v0.1.6 [INFO] [stderr] Compiling yoke-derive v0.7.5 [INFO] [stderr] Compiling zerovec-derive v0.10.3 [INFO] [stderr] Compiling displaydoc v0.2.5 [INFO] [stderr] Compiling icu_provider_macros v1.5.0 [INFO] [stderr] Compiling thiserror-impl v1.0.69 [INFO] [stderr] Compiling serde_derive v1.0.219 [INFO] [stderr] Compiling pin-project-internal v1.1.10 [INFO] [stderr] Compiling strum_macros v0.26.4 [INFO] [stderr] Compiling derive-new v0.6.0 [INFO] [stderr] Compiling thiserror-impl v2.0.12 [INFO] [stderr] Compiling libdeflater v0.12.0 [INFO] [stderr] Compiling enum-map-derive v0.17.0 [INFO] [stderr] Compiling bzip2 v0.4.4 [INFO] [stderr] Compiling strum_macros v0.25.3 [INFO] [stderr] Compiling clap v3.2.25 [INFO] [stderr] Compiling pin-project v1.1.10 [INFO] [stderr] Compiling flume v0.10.14 [INFO] [stderr] Compiling enum-map v2.7.3 [INFO] [stderr] Compiling zerofrom v0.1.6 [INFO] [stderr] Compiling nalgebra v0.29.0 [INFO] [stderr] Compiling yoke v0.7.5 [INFO] [stderr] Compiling zerovec v0.10.4 [INFO] [stderr] Compiling thiserror v1.0.69 [INFO] [stderr] Compiling thiserror v2.0.12 [INFO] [stderr] Compiling bio-types v1.0.4 [INFO] [stderr] Compiling tinystr v0.7.6 [INFO] [stderr] Compiling icu_collections v1.5.0 [INFO] [stderr] Compiling icu_locid v1.5.0 [INFO] [stderr] Compiling serde v1.0.219 [INFO] [stderr] Compiling xz2 v0.1.7 [INFO] [stderr] Compiling icu_provider v1.5.0 [INFO] [stderr] Compiling icu_locid_transform v1.5.0 [INFO] [stderr] Compiling clap_complete v3.2.5 [INFO] [stderr] Compiling icu_properties v1.5.1 [INFO] [stderr] Compiling rustybam v0.1.34 (/opt/rustwide/workdir) [INFO] [stderr] Compiling csv v1.3.1 [INFO] [stderr] Compiling multimap v0.9.1 [INFO] [stderr] Compiling vec_map v0.8.2 [INFO] [stderr] Compiling icu_normalizer v1.5.0 [INFO] [stderr] Compiling idna_adapter v1.2.0 [INFO] [stderr] Compiling idna v1.0.3 [INFO] [stderr] Compiling url v2.5.4 [INFO] [stderr] Compiling flate2 v1.1.1 [INFO] [stderr] Compiling gzp v0.11.3 [INFO] [stderr] Compiling niffler v2.7.0 [INFO] [stderr] Compiling needletail v0.5.1 [INFO] [stderr] Compiling statrs v0.16.1 [INFO] [stderr] Compiling bio v1.6.0 [INFO] [stderr] Compiling rust-htslib v0.44.1 [INFO] [stderr] Compiling bio-io v0.3.2 [INFO] [stdout] warning: lifetime flowing from input to output with different syntax can be confusing [INFO] [stdout] --> src/annotate.rs:6:26 [INFO] [stdout] | [INFO] [stdout] 6 | fn find_bed_overlaps(&self, rec: &bed::Record) -> Vec>; [INFO] [stdout] | ^^^^^ ----------------------- the lifetime gets resolved as `'_` [INFO] [stdout] | | [INFO] [stdout] | this lifetime flows to the output [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default [INFO] [stdout] help: one option is to remove the lifetime for references and use the anonymous lifetime for paths [INFO] [stdout] | [INFO] [stdout] 6 | fn find_bed_overlaps(&self, rec: &bed::Record) -> Vec>; [INFO] [stdout] | +++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: lifetime flowing from input to output with different syntax can be confusing [INFO] [stdout] --> src/annotate.rs:10:26 [INFO] [stdout] | [INFO] [stdout] 10 | fn find_bed_overlaps(&self, rec: &bed::Record) -> Vec> { [INFO] [stdout] | ^^^^^ ----------------------- the lifetime gets resolved as `'_` [INFO] [stdout] | | [INFO] [stdout] | this lifetime flows to the output [INFO] [stdout] | [INFO] [stdout] help: one option is to remove the lifetime for references and use the anonymous lifetime for paths [INFO] [stdout] | [INFO] [stdout] 10 | fn find_bed_overlaps(&self, rec: &bed::Record) -> Vec> { [INFO] [stdout] | +++ [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 2m 51s [INFO] running `Command { std: "docker" "inspect" "ad7b0c85b92c90130205b7f42b99ec754f949d28b9ecfaf3411a669fccc67a05", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "ad7b0c85b92c90130205b7f42b99ec754f949d28b9ecfaf3411a669fccc67a05", kill_on_drop: false }` [INFO] [stdout] ad7b0c85b92c90130205b7f42b99ec754f949d28b9ecfaf3411a669fccc67a05 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:90999bfc7ae267e83380e433d8e61a7c072ca6729e92edbae886d3423b3a6f4c" "/opt/rustwide/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "test" "--frozen" "--no-run" "--message-format=json" "--target" "x86_64-unknown-linux-musl", kill_on_drop: false }` [INFO] [stdout] d12c48d32a178b03290442cabc10b0d46b72585a2fd5fe38a69ccc0d3aa41c15 [INFO] running `Command { std: "docker" "start" "-a" "d12c48d32a178b03290442cabc10b0d46b72585a2fd5fe38a69ccc0d3aa41c15", kill_on_drop: false }` [INFO] [stderr] warning: file `/opt/rustwide/workdir/src/main.rs` found to be present in multiple build targets: [INFO] [stderr] * `bin` target `rb` [INFO] [stderr] * `bin` target `rustybam` [INFO] [stderr] Compiling rustybam v0.1.34 (/opt/rustwide/workdir) [INFO] [stdout] warning: lifetime flowing from input to output with different syntax can be confusing [INFO] [stdout] --> src/annotate.rs:6:26 [INFO] [stdout] | [INFO] [stdout] 6 | fn find_bed_overlaps(&self, rec: &bed::Record) -> Vec>; [INFO] [stdout] | ^^^^^ ----------------------- the lifetime gets resolved as `'_` [INFO] [stdout] | | [INFO] [stdout] | this lifetime flows to the output [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default [INFO] [stdout] help: one option is to remove the lifetime for references and use the anonymous lifetime for paths [INFO] [stdout] | [INFO] [stdout] 6 | fn find_bed_overlaps(&self, rec: &bed::Record) -> Vec>; [INFO] [stdout] | +++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: lifetime flowing from input to output with different syntax can be confusing [INFO] [stdout] --> src/annotate.rs:10:26 [INFO] [stdout] | [INFO] [stdout] 10 | fn find_bed_overlaps(&self, rec: &bed::Record) -> Vec> { [INFO] [stdout] | ^^^^^ ----------------------- the lifetime gets resolved as `'_` [INFO] [stdout] | | [INFO] [stdout] | this lifetime flows to the output [INFO] [stdout] | [INFO] [stdout] help: one option is to remove the lifetime for references and use the anonymous lifetime for paths [INFO] [stdout] | [INFO] [stdout] 10 | fn find_bed_overlaps(&self, rec: &bed::Record) -> Vec> { [INFO] [stdout] | +++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: lifetime flowing from input to output with different syntax can be confusing [INFO] [stdout] --> src/annotate.rs:6:26 [INFO] [stdout] | [INFO] [stdout] 6 | fn find_bed_overlaps(&self, rec: &bed::Record) -> Vec>; [INFO] [stdout] | ^^^^^ ----------------------- the lifetime gets resolved as `'_` [INFO] [stdout] | | [INFO] [stdout] | this lifetime flows to the output [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default [INFO] [stdout] help: one option is to remove the lifetime for references and use the anonymous lifetime for paths [INFO] [stdout] | [INFO] [stdout] 6 | fn find_bed_overlaps(&self, rec: &bed::Record) -> Vec>; [INFO] [stdout] | +++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: lifetime flowing from input to output with different syntax can be confusing [INFO] [stdout] --> src/annotate.rs:10:26 [INFO] [stdout] | [INFO] [stdout] 10 | fn find_bed_overlaps(&self, rec: &bed::Record) -> Vec> { [INFO] [stdout] | ^^^^^ ----------------------- the lifetime gets resolved as `'_` [INFO] [stdout] | | [INFO] [stdout] | this lifetime flows to the output [INFO] [stdout] | [INFO] [stdout] help: one option is to remove the lifetime for references and use the anonymous lifetime for paths [INFO] [stdout] | [INFO] [stdout] 10 | fn find_bed_overlaps(&self, rec: &bed::Record) -> Vec> { [INFO] [stdout] | +++ [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 8.80s [INFO] running `Command { std: "docker" "inspect" "d12c48d32a178b03290442cabc10b0d46b72585a2fd5fe38a69ccc0d3aa41c15", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "d12c48d32a178b03290442cabc10b0d46b72585a2fd5fe38a69ccc0d3aa41c15", kill_on_drop: false }` [INFO] [stdout] d12c48d32a178b03290442cabc10b0d46b72585a2fd5fe38a69ccc0d3aa41c15 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:90999bfc7ae267e83380e433d8e61a7c072ca6729e92edbae886d3423b3a6f4c" "/opt/rustwide/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "test" "--frozen" "--target" "x86_64-unknown-linux-musl", kill_on_drop: false }` [INFO] [stdout] b1f1547119444c46354e322b6e71b8a5218164da8e3afbb0ad261c1a52f53729 [INFO] running `Command { std: "docker" "start" "-a" "b1f1547119444c46354e322b6e71b8a5218164da8e3afbb0ad261c1a52f53729", kill_on_drop: false }` [INFO] [stderr] warning: file `/opt/rustwide/workdir/src/main.rs` found to be present in multiple build targets: [INFO] [stderr] * `bin` target `rb` [INFO] [stderr] * `bin` target `rustybam` [INFO] [stderr] warning: lifetime flowing from input to output with different syntax can be confusing [INFO] [stderr] --> src/annotate.rs:6:26 [INFO] [stderr] | [INFO] [stderr] 6 | fn find_bed_overlaps(&self, rec: &bed::Record) -> Vec>; [INFO] [stderr] | ^^^^^ ----------------------- the lifetime gets resolved as `'_` [INFO] [stderr] | | [INFO] [stderr] | this lifetime flows to the output [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default [INFO] [stderr] help: one option is to remove the lifetime for references and use the anonymous lifetime for paths [INFO] [stderr] | [INFO] [stderr] 6 | fn find_bed_overlaps(&self, rec: &bed::Record) -> Vec>; [INFO] [stderr] | +++ [INFO] [stderr] [INFO] [stderr] warning: lifetime flowing from input to output with different syntax can be confusing [INFO] [stderr] --> src/annotate.rs:10:26 [INFO] [stderr] | [INFO] [stderr] 10 | fn find_bed_overlaps(&self, rec: &bed::Record) -> Vec> { [INFO] [stderr] | ^^^^^ ----------------------- the lifetime gets resolved as `'_` [INFO] [stderr] | | [INFO] [stderr] | this lifetime flows to the output [INFO] [stderr] | [INFO] [stderr] help: one option is to remove the lifetime for references and use the anonymous lifetime for paths [INFO] [stderr] | [INFO] [stderr] 10 | fn find_bed_overlaps(&self, rec: &bed::Record) -> Vec> { [INFO] [stderr] | +++ [INFO] [stderr] [INFO] [stderr] warning: `rustybam` (lib) generated 2 warnings (run `cargo fix --lib -p rustybam` to apply 2 suggestions) [INFO] [stderr] warning: `rustybam` (lib test) generated 2 warnings (2 duplicates) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.19s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/rustybam-c85ba0dc800adc12) [INFO] [stdout] [INFO] [stdout] running 8 tests [INFO] [stdout] test annotate::tests::test_chrom_specific_overlaps ... ok [INFO] [stdout] test bamstats::tests::test_add_cigar_stats ... ok [INFO] [stdout] test liftover::tests::check_invertible ... ok [INFO] [stdout] test suns::tests::test_convert ... ok [INFO] [stdout] test suns::tests::test_sun_finding ... ok [INFO] [stdout] test liftover::tests::test_aln_pair_liftover ... ok [INFO] [stdout] test trim_overlap::tests::test_inversion_trimming ... ok [INFO] [stdout] test bamstats::tests::test_cigar_stats_from_test_file ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 8 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.04s [INFO] [stdout] [INFO] [stderr] Running unittests src/main.rs (/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/rb-f88c5380a3987045) [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Running unittests src/main.rs (/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/rustybam-4d352cecafaa4b4d) [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "b1f1547119444c46354e322b6e71b8a5218164da8e3afbb0ad261c1a52f53729", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "b1f1547119444c46354e322b6e71b8a5218164da8e3afbb0ad261c1a52f53729", kill_on_drop: false }` [INFO] [stdout] b1f1547119444c46354e322b6e71b8a5218164da8e3afbb0ad261c1a52f53729