[INFO] fetching crate rust-sasa 0.2.4... [INFO] testing rust-sasa-0.2.4 against try#8de4c7234dd9b97c9d76b58671343fdbbc9a433e+target=x86_64-unknown-linux-musl for musl_upgrade_1_2_5_with_libc_patch_0 [INFO] extracting crate rust-sasa 0.2.4 into /workspace/builds/worker-2-tc1/source [INFO] started tweaking crates.io crate rust-sasa 0.2.4 [INFO] finished tweaking crates.io crate rust-sasa 0.2.4 [INFO] tweaked toml for crates.io crate rust-sasa 0.2.4 written to /workspace/builds/worker-2-tc1/source/Cargo.toml [INFO] validating manifest of crates.io crate rust-sasa 0.2.4 on toolchain 8de4c7234dd9b97c9d76b58671343fdbbc9a433e [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Locking 53 packages to latest compatible versions [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] warning: only one of `license` or `license-file` is necessary [INFO] [stderr] `license` should be used if the package license can be expressed with a standard SPDX expression. [INFO] [stderr] `license-file` should be used if the package uses a non-standard license. [INFO] [stderr] See https://doc.rust-lang.org/cargo/reference/manifest.html#the-license-and-license-file-fields for more information. [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded snafu-derive v0.8.6 [INFO] [stderr] Downloaded simba v0.9.0 [INFO] [stderr] Downloaded doc-cfg v0.1.0 [INFO] [stderr] Downloaded nalgebra-macros v0.2.2 [INFO] [stderr] Downloaded bytemuck v1.23.1 [INFO] [stderr] Downloaded matrixmultiply v0.3.10 [INFO] [stderr] Downloaded safe_arch v0.7.4 [INFO] [stderr] Downloaded rstar v0.12.2 [INFO] [stderr] Downloaded wide v0.7.33 [INFO] [stderr] Downloaded pdbtbx v0.12.0 [INFO] [stderr] Downloaded snafu v0.8.6 [INFO] [stderr] Downloaded nalgebra v0.33.2 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:90999bfc7ae267e83380e433d8e61a7c072ca6729e92edbae886d3423b3a6f4c" "/opt/rustwide/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] f6ce671806d742e6918bceecf840b519692f931bddb72c26aa7cc691225e0049 [INFO] running `Command { std: "docker" "start" "-a" "f6ce671806d742e6918bceecf840b519692f931bddb72c26aa7cc691225e0049", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "f6ce671806d742e6918bceecf840b519692f931bddb72c26aa7cc691225e0049", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "f6ce671806d742e6918bceecf840b519692f931bddb72c26aa7cc691225e0049", kill_on_drop: false }` [INFO] [stdout] f6ce671806d742e6918bceecf840b519692f931bddb72c26aa7cc691225e0049 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:90999bfc7ae267e83380e433d8e61a7c072ca6729e92edbae886d3423b3a6f4c" "/opt/rustwide/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "build" "--frozen" "--message-format=json" "--target" "x86_64-unknown-linux-musl", kill_on_drop: false }` [INFO] [stdout] d1bb289dfdf67d9e2f94152c1ce4b07a791a8055b7351f43b03b6c717dcc109c [INFO] running `Command { std: "docker" "start" "-a" "d1bb289dfdf67d9e2f94152c1ce4b07a791a8055b7351f43b03b6c717dcc109c", kill_on_drop: false }` [INFO] [stderr] warning: only one of `license` or `license-file` is necessary [INFO] [stderr] `license` should be used if the package license can be expressed with a standard SPDX expression. [INFO] [stderr] `license-file` should be used if the package uses a non-standard license. [INFO] [stderr] See https://doc.rust-lang.org/cargo/reference/manifest.html#the-license-and-license-file-fields for more information. [INFO] [stderr] Compiling libm v0.2.15 [INFO] [stderr] Compiling num-traits v0.2.19 [INFO] [stderr] Compiling proc-macro2 v0.4.30 [INFO] [stderr] Compiling bytemuck v1.23.1 [INFO] [stderr] Compiling heapless v0.8.0 [INFO] [stderr] Compiling byteorder v1.5.0 [INFO] [stderr] Compiling matrixmultiply v0.3.10 [INFO] [stderr] Compiling typenum v1.18.0 [INFO] [stderr] Compiling stable_deref_trait v1.2.0 [INFO] [stderr] Compiling serde v1.0.219 [INFO] [stderr] Compiling adler2 v2.0.1 [INFO] [stderr] Compiling crc32fast v1.4.2 [INFO] [stderr] Compiling smallvec v1.15.1 [INFO] [stderr] Compiling rawpointer v0.2.1 [INFO] [stderr] Compiling heck v0.5.0 [INFO] [stderr] Compiling either v1.15.0 [INFO] [stderr] Compiling nalgebra-macros v0.2.2 [INFO] [stderr] Compiling miniz_oxide v0.8.9 [INFO] [stderr] Compiling rayon v1.10.0 [INFO] [stderr] Compiling safe_arch v0.7.4 [INFO] [stderr] Compiling snafu-derive v0.8.6 [INFO] [stderr] Compiling hash32 v0.3.1 [INFO] [stderr] Compiling flate2 v1.1.2 [INFO] [stderr] Compiling wide v0.7.33 [INFO] [stderr] Compiling quote v0.6.13 [INFO] [stderr] Compiling doc-cfg v0.1.0 [INFO] [stderr] Compiling snafu v0.8.6 [INFO] [stderr] Compiling num-complex v0.4.6 [INFO] [stderr] Compiling num-integer v0.1.46 [INFO] [stderr] Compiling approx v0.5.1 [INFO] [stderr] Compiling rstar v0.12.2 [INFO] [stderr] Compiling num-rational v0.4.2 [INFO] [stderr] Compiling simba v0.9.0 [INFO] [stderr] Compiling pdbtbx v0.12.0 [INFO] [stderr] Compiling nalgebra v0.33.2 [INFO] [stderr] Compiling rust-sasa v0.2.4 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused import: `snafu::Snafu` [INFO] [stdout] --> src/utils.rs:1:5 [INFO] [stdout] | [INFO] [stdout] 1 | use snafu::Snafu; [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: constant `FIXED_FOR_EXAMPLE` is never used [INFO] [stdout] --> src/test.rs:1:7 [INFO] [stdout] | [INFO] [stdout] 1 | const FIXED_FOR_EXAMPLE: [f32; 2622] = [ [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 23.79s [INFO] running `Command { std: "docker" "inspect" "d1bb289dfdf67d9e2f94152c1ce4b07a791a8055b7351f43b03b6c717dcc109c", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "d1bb289dfdf67d9e2f94152c1ce4b07a791a8055b7351f43b03b6c717dcc109c", kill_on_drop: false }` [INFO] [stdout] d1bb289dfdf67d9e2f94152c1ce4b07a791a8055b7351f43b03b6c717dcc109c [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:90999bfc7ae267e83380e433d8e61a7c072ca6729e92edbae886d3423b3a6f4c" "/opt/rustwide/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "test" "--frozen" "--no-run" "--message-format=json" "--target" "x86_64-unknown-linux-musl", kill_on_drop: false }` [INFO] [stdout] 806b71a1400b92c9211b30ad019bade8afac34fc8d13cd51feb5f8b9ce636394 [INFO] running `Command { std: "docker" "start" "-a" "806b71a1400b92c9211b30ad019bade8afac34fc8d13cd51feb5f8b9ce636394", kill_on_drop: false }` [INFO] [stderr] warning: only one of `license` or `license-file` is necessary [INFO] [stderr] `license` should be used if the package license can be expressed with a standard SPDX expression. [INFO] [stderr] `license-file` should be used if the package uses a non-standard license. [INFO] [stderr] See https://doc.rust-lang.org/cargo/reference/manifest.html#the-license-and-license-file-fields for more information. [INFO] [stderr] Compiling rust-sasa v0.2.4 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused import: `snafu::Snafu` [INFO] [stdout] --> src/utils.rs:1:5 [INFO] [stdout] | [INFO] [stdout] 1 | use snafu::Snafu; [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: constant `FIXED_FOR_EXAMPLE` is never used [INFO] [stdout] --> src/test.rs:1:7 [INFO] [stdout] | [INFO] [stdout] 1 | const FIXED_FOR_EXAMPLE: [f32; 2622] = [ [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `pdbtbx::StrictnessLevel` [INFO] [stdout] --> src/test.rs:246:9 [INFO] [stdout] | [INFO] [stdout] 246 | use pdbtbx::StrictnessLevel; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `snafu::Snafu` [INFO] [stdout] --> src/utils.rs:1:5 [INFO] [stdout] | [INFO] [stdout] 1 | use snafu::Snafu; [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/test.rs:251:14 [INFO] [stdout] | [INFO] [stdout] 251 | let (mut pdb, _errors) = pdbtbx::open("./example.cif").unwrap(); [INFO] [stdout] | ----^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_mut)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `residue_sasa` [INFO] [stdout] --> src/test.rs:282:13 [INFO] [stdout] | [INFO] [stdout] 282 | let residue_sasa = calculate_sasa(&pdb, None, None, SASALevel::Residue).unwrap(); [INFO] [stdout] | ^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_residue_sasa` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/test.rs:278:14 [INFO] [stdout] | [INFO] [stdout] 278 | let (mut pdb, _errors) = pdbtbx::open("./example.cif").unwrap(); [INFO] [stdout] | ----^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 2.31s [INFO] running `Command { std: "docker" "inspect" "806b71a1400b92c9211b30ad019bade8afac34fc8d13cd51feb5f8b9ce636394", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "806b71a1400b92c9211b30ad019bade8afac34fc8d13cd51feb5f8b9ce636394", kill_on_drop: false }` [INFO] [stdout] 806b71a1400b92c9211b30ad019bade8afac34fc8d13cd51feb5f8b9ce636394 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:90999bfc7ae267e83380e433d8e61a7c072ca6729e92edbae886d3423b3a6f4c" "/opt/rustwide/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "test" "--frozen" "--target" "x86_64-unknown-linux-musl", kill_on_drop: false }` [INFO] [stdout] e284600457849c1f442c8c51935c133e7656cd143f9991f9ff2a24f63d8f13d6 [INFO] running `Command { std: "docker" "start" "-a" "e284600457849c1f442c8c51935c133e7656cd143f9991f9ff2a24f63d8f13d6", kill_on_drop: false }` [INFO] [stderr] warning: only one of `license` or `license-file` is necessary [INFO] [stderr] `license` should be used if the package license can be expressed with a standard SPDX expression. [INFO] [stderr] `license-file` should be used if the package uses a non-standard license. [INFO] [stderr] See https://doc.rust-lang.org/cargo/reference/manifest.html#the-license-and-license-file-fields for more information. [INFO] [stderr] warning: unused import: `snafu::Snafu` [INFO] [stderr] --> src/utils.rs:1:5 [INFO] [stderr] | [INFO] [stderr] 1 | use snafu::Snafu; [INFO] [stderr] | ^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_imports)]` on by default [INFO] [stderr] [INFO] [stderr] warning: constant `FIXED_FOR_EXAMPLE` is never used [INFO] [stderr] --> src/test.rs:1:7 [INFO] [stderr] | [INFO] [stderr] 1 | const FIXED_FOR_EXAMPLE: [f32; 2622] = [ [INFO] [stderr] | ^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(dead_code)]` on by default [INFO] [stderr] [INFO] [stderr] warning: unused import: `pdbtbx::StrictnessLevel` [INFO] [stderr] --> src/test.rs:246:9 [INFO] [stderr] | [INFO] [stderr] 246 | use pdbtbx::StrictnessLevel; [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_imports)]` on by default [INFO] [stderr] [INFO] [stderr] warning: unused import: `snafu::Snafu` [INFO] [stderr] --> src/utils.rs:1:5 [INFO] [stderr] | [INFO] [stderr] 1 | use snafu::Snafu; [INFO] [stderr] | ^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: variable does not need to be mutable [INFO] [stderr] --> src/test.rs:251:14 [INFO] [stderr] | [INFO] [stderr] 251 | let (mut pdb, _errors) = pdbtbx::open("./example.cif").unwrap(); [INFO] [stderr] | ----^^^ [INFO] [stderr] | | [INFO] [stderr] | help: remove this `mut` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_mut)]` on by default [INFO] [stderr] [INFO] [stderr] warning: unused variable: `residue_sasa` [INFO] [stderr] --> src/test.rs:282:13 [INFO] [stderr] | [INFO] [stderr] 282 | let residue_sasa = calculate_sasa(&pdb, None, None, SASALevel::Residue).unwrap(); [INFO] [stderr] | ^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_residue_sasa` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_variables)]` on by default [INFO] [stderr] [INFO] [stderr] warning: variable does not need to be mutable [INFO] [stderr] --> src/test.rs:278:14 [INFO] [stderr] | [INFO] [stderr] 278 | let (mut pdb, _errors) = pdbtbx::open("./example.cif").unwrap(); [INFO] [stderr] | ----^^^ [INFO] [stderr] | | [INFO] [stderr] | help: remove this `mut` [INFO] [stderr] [INFO] [stderr] warning: `rust-sasa` (lib) generated 2 warnings (run `cargo fix --lib -p rust-sasa` to apply 1 suggestion) [INFO] [stderr] warning: `rust-sasa` (lib test) generated 5 warnings (run `cargo fix --lib -p rust-sasa --tests` to apply 4 suggestions) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.08s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/rust_sasa-2d65465cd2765305) [INFO] [stdout] [INFO] [stdout] running 2 tests [INFO] [stdout] test test::tests::internal_test ... ok [INFO] [stdout] test test::tests::external_test ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 2 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 17.25s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "e284600457849c1f442c8c51935c133e7656cd143f9991f9ff2a24f63d8f13d6", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "e284600457849c1f442c8c51935c133e7656cd143f9991f9ff2a24f63d8f13d6", kill_on_drop: false }` [INFO] [stdout] e284600457849c1f442c8c51935c133e7656cd143f9991f9ff2a24f63d8f13d6