[INFO] fetching crate pfapack 0.2.0... [INFO] testing pfapack-0.2.0 against try#8de4c7234dd9b97c9d76b58671343fdbbc9a433e+target=x86_64-unknown-linux-musl for musl_upgrade_1_2_5_with_libc_patch_0 [INFO] extracting crate pfapack 0.2.0 into /workspace/builds/worker-0-tc1/source [INFO] started tweaking crates.io crate pfapack 0.2.0 [INFO] finished tweaking crates.io crate pfapack 0.2.0 [INFO] tweaked toml for crates.io crate pfapack 0.2.0 written to /workspace/builds/worker-0-tc1/source/Cargo.toml [INFO] validating manifest of crates.io crate pfapack 0.2.0 on toolchain 8de4c7234dd9b97c9d76b58671343fdbbc9a433e [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Locking 9 packages to latest compatible versions [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded assert v0.7.5 [INFO] [stderr] Downloaded pfapack-sys v0.1.1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:90999bfc7ae267e83380e433d8e61a7c072ca6729e92edbae886d3423b3a6f4c" "/opt/rustwide/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] a710b9a35e84077e24a55f7590071421e887cf9f674ca8f7dd07eba4dd9ac913 [INFO] running `Command { std: "docker" "start" "-a" "a710b9a35e84077e24a55f7590071421e887cf9f674ca8f7dd07eba4dd9ac913", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "a710b9a35e84077e24a55f7590071421e887cf9f674ca8f7dd07eba4dd9ac913", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "a710b9a35e84077e24a55f7590071421e887cf9f674ca8f7dd07eba4dd9ac913", kill_on_drop: false }` [INFO] [stdout] a710b9a35e84077e24a55f7590071421e887cf9f674ca8f7dd07eba4dd9ac913 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:90999bfc7ae267e83380e433d8e61a7c072ca6729e92edbae886d3423b3a6f4c" "/opt/rustwide/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "build" "--frozen" "--message-format=json" "--target" "x86_64-unknown-linux-musl", kill_on_drop: false }` [INFO] [stdout] 62f420264f83ea2d2f96c0ac5cfd7adeb99a2c52525ab376fd3e19b994d1d26c [INFO] running `Command { std: "docker" "start" "-a" "62f420264f83ea2d2f96c0ac5cfd7adeb99a2c52525ab376fd3e19b994d1d26c", kill_on_drop: false }` [INFO] [stderr] Compiling pfapack-sys v0.1.1 [INFO] [stderr] Compiling pfapack v0.2.0 (/opt/rustwide/workdir) [INFO] [stderr] Compiling num-complex v0.4.6 [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 23.99s [INFO] running `Command { std: "docker" "inspect" "62f420264f83ea2d2f96c0ac5cfd7adeb99a2c52525ab376fd3e19b994d1d26c", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "62f420264f83ea2d2f96c0ac5cfd7adeb99a2c52525ab376fd3e19b994d1d26c", kill_on_drop: false }` [INFO] [stdout] 62f420264f83ea2d2f96c0ac5cfd7adeb99a2c52525ab376fd3e19b994d1d26c [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:90999bfc7ae267e83380e433d8e61a7c072ca6729e92edbae886d3423b3a6f4c" "/opt/rustwide/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "test" "--frozen" "--no-run" "--message-format=json" "--target" "x86_64-unknown-linux-musl", kill_on_drop: false }` [INFO] [stdout] cff25ad5ac655d9d066c546513e67f4d91fb27dfc99df340322459c11b9dc3c9 [INFO] running `Command { std: "docker" "start" "-a" "cff25ad5ac655d9d066c546513e67f4d91fb27dfc99df340322459c11b9dc3c9", kill_on_drop: false }` [INFO] [stderr] Compiling yansi v1.0.1 [INFO] [stderr] Compiling diff v0.1.13 [INFO] [stderr] Compiling assert v0.7.5 [INFO] [stderr] Compiling pretty_assertions v1.4.1 [INFO] [stderr] Compiling pfapack v0.2.0 (/opt/rustwide/workdir) [INFO] [stdout] error: linking with `cc` failed: exit status: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-m64" "/lib/rustlib/x86_64-unknown-linux-musl/lib/self-contained/rcrt1.o" "/lib/rustlib/x86_64-unknown-linux-musl/lib/self-contained/crti.o" "/lib/rustlib/x86_64-unknown-linux-musl/lib/self-contained/crtbeginS.o" "/tmp/rustcO4Zqka/symbols.o" "<3 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/lib/rustlib/x86_64-unknown-linux-musl/lib/{libtest-*,libgetopts-*,libunicode_width-*,librustc_std_workspace_std-*}.rlib" "/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/{libassert-c3e6ea3f3a27611a.rlib,libpretty_assertions-afe3c20f6d9cad07.rlib,libdiff-7907457067fbaa13.rlib,libyansi-bff256af726dd5e7.rlib,libpfapack-70f0f37432d803fe.rlib}.rlib" "-lpfapack" "-lcpfapack" "-llapack" "-lblas" "/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/{liblibc-8e354d7ef70926da.rlib,libpfapack_sys-517c0c06e24fc841.rlib}.rlib" "-lpfapack" "-lcpfapack" "/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/{libnum_complex-5835e5478108627b.rlib,libnum_traits-2228747af9b6fe60.rlib}.rlib" "/lib/rustlib/x86_64-unknown-linux-musl/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*}.rlib" "-lunwind" "/lib/rustlib/x86_64-unknown-linux-musl/lib/{libcfg_if-*,liblibc-*}.rlib" "-lc" "/lib/rustlib/x86_64-unknown-linux-musl/lib/{librustc_std_workspace_core-*,liballoc-*,libcore-*,libcompiler_builtins-*}.rlib" "-L" "/tmp/rustcO4Zqka/raw-dylibs" "-Wl,-Bdynamic" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-nostartfiles" "-L" "/opt/rustwide/target/x86_64-unknown-linux-musl/debug/build/pfapack-sys-a14d9b13a587baa0/out/c_interface" "-L" "/opt/rustwide/target/x86_64-unknown-linux-musl/debug/build/pfapack-sys-a14d9b13a587baa0/out/fortran" "-L" "/lib/rustlib/x86_64-unknown-linux-musl/lib/self-contained" "-L" "/lib/rustlib/x86_64-unknown-linux-musl/lib" "-o" "/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/skpfa_test-67c7382ce82655f7" "-Wl,--gc-sections" "-static-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs" "/lib/rustlib/x86_64-unknown-linux-musl/lib/self-contained/crtendS.o" "/lib/rustlib/x86_64-unknown-linux-musl/lib/self-contained/crtn.o" [INFO] [stdout] = note: some arguments are omitted. use `--verbose` to show all linker arguments [INFO] [stdout] = note: /usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/13/../../../x86_64-linux-gnu/liblapack.a(memory.o): in function `get_num_procs': [INFO] [stdout] (.text+0x210): undefined reference to `__sched_cpualloc' [INFO] [stdout] /usr/bin/ld: (.text+0x25c): undefined reference to `__sched_cpufree' [INFO] [stdout] /usr/bin/ld: (.text+0x2b4): undefined reference to `__sched_cpufree' [INFO] [stdout] /usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/13/../../../x86_64-linux-gnu/liblapack.a(memory.o): in function `blas_memory_alloc': [INFO] [stdout] (.text+0x7d0): undefined reference to `__fprintf_chk' [INFO] [stdout] /usr/bin/ld: (.text+0x877): undefined reference to `__printf_chk' [INFO] [stdout] /usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/13/../../../x86_64-linux-gnu/liblapack.a(memory.o): in function `blas_memory_free': [INFO] [stdout] (.text+0x982): undefined reference to `__printf_chk' [INFO] [stdout] /usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/13/../../../x86_64-linux-gnu/liblapack.a(memory.o): in function `alloc_mmap_free.cold': [INFO] [stdout] (.text.unlikely+0x2d): undefined reference to `__printf_chk' [INFO] [stdout] /usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/13/../../../x86_64-linux-gnu/liblapack.a(sgemv_thread_n.o): in function `sgemv_thread_n': [INFO] [stdout] (.text+0x33f): undefined reference to `__memset_chk' [INFO] [stdout] /usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/13/../../../x86_64-linux-gnu/liblapack.a(dgemv_thread_n.o): in function `dgemv_thread_n': [INFO] [stdout] (.text+0x33f): undefined reference to `__memset_chk' [INFO] [stdout] /usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/13/../../../x86_64-linux-gnu/liblapack.a(cgemv_thread_n.o): in function `cgemv_thread_n': [INFO] [stdout] (.text+0x352): undefined reference to `__memset_chk' [INFO] [stdout] /usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/13/../../../x86_64-linux-gnu/liblapack.a(cgemv_thread_r.o): in function `cgemv_thread_r': [INFO] [stdout] (.text+0x352): undefined reference to `__memset_chk' [INFO] [stdout] /usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/13/../../../x86_64-linux-gnu/liblapack.a(cgemv_thread_o.o): in function `cgemv_thread_o': [INFO] [stdout] (.text+0x352): undefined reference to `__memset_chk' [INFO] [stdout] /usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/13/../../../x86_64-linux-gnu/liblapack.a(cgemv_thread_s.o):(.text+0x352): more undefined references to `__memset_chk' follow [INFO] [stdout] /usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/13/../../../x86_64-linux-gnu/liblapack.a(xerbla.o): in function `__xerbla': [INFO] [stdout] (.text+0x1c): undefined reference to `__printf_chk' [INFO] [stdout] /usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/13/../../../x86_64-linux-gnu/liblapack.a(openblas_env.o): in function `openblas_read_env': [INFO] [stdout] (.text+0x9b): undefined reference to `__isoc23_strtol' [INFO] [stdout] /usr/bin/ld: (.text+0xca): undefined reference to `__isoc23_strtol' [INFO] [stdout] /usr/bin/ld: (.text+0xf9): undefined reference to `__isoc23_strtol' [INFO] [stdout] /usr/bin/ld: (.text+0x12a): undefined reference to `__isoc23_strtol' [INFO] [stdout] /usr/bin/ld: (.text+0x15a): undefined reference to `__isoc23_strtol' [INFO] [stdout] /usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/13/../../../x86_64-linux-gnu/liblapack.a(openblas_env.o):(.text+0x18e): more undefined references to `__isoc23_strtol' follow [INFO] [stdout] /usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/13/../../../x86_64-linux-gnu/liblapack.a(blas_server.o): in function `blas_thread_init': [INFO] [stdout] (.text+0x60a): undefined reference to `__fprintf_chk' [INFO] [stdout] /usr/bin/ld: (.text+0x6a1): undefined reference to `__fprintf_chk' [INFO] [stdout] /usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/13/../../../x86_64-linux-gnu/liblapack.a(dynamic.o): in function `gotoblas_dynamic_init': [INFO] [stdout] (.text+0x5c2): undefined reference to `__sprintf_chk' [INFO] [stdout] /usr/bin/ld: (.text+0x95e): undefined reference to `__snprintf_chk' [INFO] [stdout] collect2: error: ld returned 1 exit status [INFO] [stdout] [INFO] [stdout] = note: some `extern` functions couldn't be found; some native libraries may need to be installed or have their path specified [INFO] [stdout] = note: use the `-l` flag to specify native libraries to link [INFO] [stdout] = note: use the `cargo:rustc-link-lib` directive to specify the native libraries to link with Cargo (see https://doc.rust-lang.org/cargo/reference/build-scripts.html#rustc-link-lib) [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] error: could not compile `pfapack` (test "skpfa_test") due to 1 previous error [INFO] running `Command { std: "docker" "inspect" "cff25ad5ac655d9d066c546513e67f4d91fb27dfc99df340322459c11b9dc3c9", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "cff25ad5ac655d9d066c546513e67f4d91fb27dfc99df340322459c11b9dc3c9", kill_on_drop: false }` [INFO] [stdout] cff25ad5ac655d9d066c546513e67f4d91fb27dfc99df340322459c11b9dc3c9