[INFO] fetching crate noodles-cram 0.84.0... [INFO] testing noodles-cram-0.84.0 against try#8de4c7234dd9b97c9d76b58671343fdbbc9a433e+target=x86_64-unknown-linux-musl for musl_upgrade_1_2_5_with_libc_patch_0 [INFO] extracting crate noodles-cram 0.84.0 into /workspace/builds/worker-0-tc1/source [INFO] started tweaking crates.io crate noodles-cram 0.84.0 [INFO] removed 0 missing examples [INFO] finished tweaking crates.io crate noodles-cram 0.84.0 [INFO] tweaked toml for crates.io crate noodles-cram 0.84.0 written to /workspace/builds/worker-0-tc1/source/Cargo.toml [INFO] validating manifest of crates.io crate noodles-cram 0.84.0 on toolchain 8de4c7234dd9b97c9d76b58671343fdbbc9a433e [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate noodles-cram 0.84.0 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded noodles-csi v0.49.0 [INFO] [stderr] Downloaded noodles-core v0.17.0 [INFO] [stderr] Downloaded noodles-sam v0.77.0 [INFO] [stderr] Downloaded libdeflater v1.24.0 [INFO] [stderr] Downloaded noodles-bam v0.81.0 [INFO] [stderr] Downloaded noodles-fasta v0.54.0 [INFO] [stderr] Downloaded noodles-bgzf v0.41.0 [INFO] [stderr] Downloaded libdeflate-sys v1.24.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:90999bfc7ae267e83380e433d8e61a7c072ca6729e92edbae886d3423b3a6f4c" "/opt/rustwide/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] f34a6c1629debe6c32b3a976692e130d5ec22423f1483ac0e7c03a1adb4813d8 [INFO] running `Command { std: "docker" "start" "-a" "f34a6c1629debe6c32b3a976692e130d5ec22423f1483ac0e7c03a1adb4813d8", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "f34a6c1629debe6c32b3a976692e130d5ec22423f1483ac0e7c03a1adb4813d8", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "f34a6c1629debe6c32b3a976692e130d5ec22423f1483ac0e7c03a1adb4813d8", kill_on_drop: false }` [INFO] [stdout] f34a6c1629debe6c32b3a976692e130d5ec22423f1483ac0e7c03a1adb4813d8 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:90999bfc7ae267e83380e433d8e61a7c072ca6729e92edbae886d3423b3a6f4c" "/opt/rustwide/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "build" "--frozen" "--message-format=json" "--target" "x86_64-unknown-linux-musl", kill_on_drop: false }` [INFO] [stdout] 8abd0d2ee72e4ba1a7db8b93ef85aeaf90e1a98c838658fdb0ab4841adb8ba0a [INFO] running `Command { std: "docker" "start" "-a" "8abd0d2ee72e4ba1a7db8b93ef85aeaf90e1a98c838658fdb0ab4841adb8ba0a", kill_on_drop: false }` [INFO] [stderr] Compiling cc v1.2.24 [INFO] [stderr] Compiling crossbeam-utils v0.8.21 [INFO] [stderr] Compiling zlib-rs v0.5.0 [INFO] [stderr] Compiling lexical-util v1.0.6 [INFO] [stderr] Compiling generic-array v0.14.7 [INFO] [stderr] Compiling crc32fast v1.4.2 [INFO] [stderr] Compiling memchr v2.7.4 [INFO] [stderr] Compiling byteorder v1.5.0 [INFO] [stderr] Compiling libc v0.2.172 [INFO] [stderr] Compiling equivalent v1.0.2 [INFO] [stderr] Compiling hashbrown v0.15.3 [INFO] [stderr] Compiling bit-vec v0.8.0 [INFO] [stderr] Compiling bstr v1.12.0 [INFO] [stderr] Compiling crossbeam-channel v0.5.15 [INFO] [stderr] Compiling lexical-parse-integer v1.0.5 [INFO] [stderr] Compiling lexical-write-integer v1.0.5 [INFO] [stderr] Compiling lexical-parse-float v1.0.5 [INFO] [stderr] Compiling lexical-write-float v1.0.5 [INFO] [stderr] Compiling indexmap v2.9.0 [INFO] [stderr] Compiling noodles-core v0.17.0 [INFO] [stderr] Compiling block-buffer v0.10.4 [INFO] [stderr] Compiling crypto-common v0.1.6 [INFO] [stderr] Compiling bitflags v2.9.1 [INFO] [stderr] Compiling lexical-core v1.0.5 [INFO] [stderr] Compiling digest v0.10.7 [INFO] [stderr] Compiling md-5 v0.10.6 [INFO] [stderr] Compiling bzip2-sys v0.1.13+1.0.8 [INFO] [stderr] Compiling lzma-sys v0.1.20 [INFO] [stderr] Compiling bzip2 v0.5.2 [INFO] [stderr] Compiling libz-rs-sys v0.5.0 [INFO] [stderr] Compiling flate2 v1.1.1 [INFO] [stderr] Compiling noodles-bgzf v0.41.0 [INFO] [stderr] Compiling noodles-csi v0.49.0 [INFO] [stderr] Compiling noodles-fasta v0.54.0 [INFO] [stderr] Compiling noodles-sam v0.77.0 [INFO] [stderr] Compiling noodles-bam v0.81.0 [INFO] [stderr] Compiling xz2 v0.1.7 [INFO] [stderr] Compiling noodles-cram v0.84.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: lifetime flowing from input to output with different syntax can be confusing [INFO] [stdout] --> src/io/reader/container/slice.rs:96:9 [INFO] [stdout] | [INFO] [stdout] 96 | &self, [INFO] [stdout] | ^^^^^ this lifetime flows to the output [INFO] [stdout] ... [INFO] [stdout] 102 | ) -> io::Result> { [INFO] [stdout] | ------ the lifetime gets resolved as `'_` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default [INFO] [stdout] help: one option is to remove the lifetime for references and use the anonymous lifetime for paths [INFO] [stdout] | [INFO] [stdout] 102 | ) -> io::Result>> { [INFO] [stdout] | ++++ [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 31.25s [INFO] running `Command { std: "docker" "inspect" "8abd0d2ee72e4ba1a7db8b93ef85aeaf90e1a98c838658fdb0ab4841adb8ba0a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "8abd0d2ee72e4ba1a7db8b93ef85aeaf90e1a98c838658fdb0ab4841adb8ba0a", kill_on_drop: false }` [INFO] [stdout] 8abd0d2ee72e4ba1a7db8b93ef85aeaf90e1a98c838658fdb0ab4841adb8ba0a [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:90999bfc7ae267e83380e433d8e61a7c072ca6729e92edbae886d3423b3a6f4c" "/opt/rustwide/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "test" "--frozen" "--no-run" "--message-format=json" "--target" "x86_64-unknown-linux-musl", kill_on_drop: false }` [INFO] [stdout] b744345f110877fc86a6a49cb68d59860aa3bf64aee07e18166a86fc2ffb21b3 [INFO] running `Command { std: "docker" "start" "-a" "b744345f110877fc86a6a49cb68d59860aa3bf64aee07e18166a86fc2ffb21b3", kill_on_drop: false }` [INFO] [stderr] Compiling autocfg v1.4.0 [INFO] [stderr] Compiling syn v2.0.101 [INFO] [stderr] Compiling futures-channel v0.3.31 [INFO] [stderr] Compiling slab v0.4.9 [INFO] [stderr] Compiling futures-util v0.3.31 [INFO] [stderr] Compiling futures v0.3.31 [INFO] [stderr] Compiling tokio-macros v2.5.0 [INFO] [stderr] Compiling tokio v1.45.1 [INFO] [stderr] Compiling tokio-util v0.7.15 [INFO] [stderr] Compiling noodles-bgzf v0.41.0 [INFO] [stderr] Compiling noodles-csi v0.49.0 [INFO] [stderr] Compiling noodles-fasta v0.54.0 [INFO] [stderr] Compiling noodles-sam v0.77.0 [INFO] [stderr] Compiling noodles-bam v0.81.0 [INFO] [stderr] Compiling noodles-cram v0.84.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: lifetime flowing from input to output with different syntax can be confusing [INFO] [stdout] --> src/io/reader/container/slice.rs:96:9 [INFO] [stdout] | [INFO] [stdout] 96 | &self, [INFO] [stdout] | ^^^^^ this lifetime flows to the output [INFO] [stdout] ... [INFO] [stdout] 102 | ) -> io::Result> { [INFO] [stdout] | ------ the lifetime gets resolved as `'_` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default [INFO] [stdout] help: one option is to remove the lifetime for references and use the anonymous lifetime for paths [INFO] [stdout] | [INFO] [stdout] 102 | ) -> io::Result>> { [INFO] [stdout] | ++++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: lifetime flowing from input to output with different syntax can be confusing [INFO] [stdout] --> src/io/reader/container/slice.rs:96:9 [INFO] [stdout] | [INFO] [stdout] 96 | &self, [INFO] [stdout] | ^^^^^ this lifetime flows to the output [INFO] [stdout] ... [INFO] [stdout] 102 | ) -> io::Result> { [INFO] [stdout] | ------ the lifetime gets resolved as `'_` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default [INFO] [stdout] help: one option is to remove the lifetime for references and use the anonymous lifetime for paths [INFO] [stdout] | [INFO] [stdout] 102 | ) -> io::Result>> { [INFO] [stdout] | ++++ [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 37.36s [INFO] running `Command { std: "docker" "inspect" "b744345f110877fc86a6a49cb68d59860aa3bf64aee07e18166a86fc2ffb21b3", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "b744345f110877fc86a6a49cb68d59860aa3bf64aee07e18166a86fc2ffb21b3", kill_on_drop: false }` [INFO] [stdout] b744345f110877fc86a6a49cb68d59860aa3bf64aee07e18166a86fc2ffb21b3 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:90999bfc7ae267e83380e433d8e61a7c072ca6729e92edbae886d3423b3a6f4c" "/opt/rustwide/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "test" "--frozen" "--target" "x86_64-unknown-linux-musl", kill_on_drop: false }` [INFO] [stdout] 303692be1b2748123943b4e8efb4cebac3a69d281182c13d4f7e2277d3a0766d [INFO] running `Command { std: "docker" "start" "-a" "303692be1b2748123943b4e8efb4cebac3a69d281182c13d4f7e2277d3a0766d", kill_on_drop: false }` [INFO] [stderr] warning: lifetime flowing from input to output with different syntax can be confusing [INFO] [stderr] --> src/io/reader/container/slice.rs:96:9 [INFO] [stderr] | [INFO] [stderr] 96 | &self, [INFO] [stderr] | ^^^^^ this lifetime flows to the output [INFO] [stderr] ... [INFO] [stderr] 102 | ) -> io::Result> { [INFO] [stderr] | ------ the lifetime gets resolved as `'_` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default [INFO] [stderr] help: one option is to remove the lifetime for references and use the anonymous lifetime for paths [INFO] [stderr] | [INFO] [stderr] 102 | ) -> io::Result>> { [INFO] [stderr] | ++++ [INFO] [stderr] [INFO] [stderr] warning: `noodles-cram` (lib) generated 1 warning (run `cargo fix --lib -p noodles-cram` to apply 1 suggestion) [INFO] [stderr] warning: `noodles-cram` (lib test) generated 1 warning (1 duplicate) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.16s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/noodles_cram-34000d29725e4378) [INFO] [stdout] [INFO] [stdout] running 168 tests [INFO] [stdout] test codecs::aac::decode::tests::test_decode_order_0 ... ok [INFO] [stdout] test codecs::aac::decode::tests::test_decode_order_1 ... ok [INFO] [stdout] test codecs::aac::decode::tests::test_decode_uncompressed ... ok [INFO] [stdout] test codecs::aac::decode::tests::test_decode_stripe ... ok [INFO] [stdout] test codecs::aac::decode::tests::test_decode_rle_with_order_1 ... ok [INFO] [stdout] test codecs::aac::encode::tests::test_encode_cat ... ok [INFO] [stdout] test codecs::aac::encode::tests::test_encode_ext ... ok [INFO] [stdout] test codecs::aac::encode::tests::test_encode_pack ... ok [INFO] [stdout] test codecs::aac::encode::tests::test_encode_rle_with_order_1 ... ok [INFO] [stdout] test codecs::aac::encode::tests::test_encode_order_1 ... ok [INFO] [stdout] test codecs::aac::encode::tests::test_encode_rle_with_order_0 ... ok [INFO] [stdout] test codecs::aac::encode::tests::test_encode_order_0 ... ok [INFO] [stdout] test codecs::aac::encode::tests::test_encode_stripe ... ok [INFO] [stdout] test codecs::fqzcomp::decode::tests::test_reverse_qualities ... ok [INFO] [stdout] test codecs::aac::decode::tests::test_decode_bit_packing_with_6_symbols ... ok [INFO] [stdout] test codecs::aac::decode::tests::test_decode_rle_with_order_0 ... ok [INFO] [stdout] test codecs::name_tokenizer::decode::tests::test_decode ... ok [INFO] [stdout] test codecs::name_tokenizer::decode::tests::test_decode_with_arithmetic_coder ... ok [INFO] [stdout] test codecs::rans_4x8::decode::header::tests::test_read_header ... ok [INFO] [stdout] test codecs::name_tokenizer::tests::test_self ... ok [INFO] [stdout] test codecs::rans_4x8::decode::header::tests::test_read_order ... ok [INFO] [stdout] test codecs::rans_4x8::decode::tests::test_read_header ... ok [INFO] [stdout] test codecs::rans_4x8::decode::tests::test_decode_with_order_0 ... ok [INFO] [stdout] test codecs::rans_4x8::encode::header::tests::test_write_header ... ok [INFO] [stdout] test codecs::rans_4x8::encode::header::tests::test_write_order ... ok [INFO] [stdout] test codecs::rans_4x8::encode::order_0::tests::test_build_raw_frequencies ... ok [INFO] [stdout] test codecs::rans_4x8::encode::order_1::tests::test_build_raw_frequencies ... ok [INFO] [stdout] test codecs::rans_4x8::encode::order_0::tests::test_normalize_frequencies ... ok [INFO] [stdout] test codecs::rans_4x8::encode::order_0::tests::test_encode ... ok [INFO] [stdout] test codecs::rans_4x8::encode::order_1::tests::test_normalize_frequencies ... ok [INFO] [stdout] test codecs::rans_4x8::encode::tests::test_encode_with_order_0 ... ok [INFO] [stdout] test codecs::rans_4x8::encode::order_1::tests::test_split_chunks ... ok [INFO] [stdout] test codecs::rans_4x8::encode::order_1::tests::test_encode ... ok [INFO] [stdout] test codecs::rans_4x8::encode::tests::test_encode_with_order_1 ... ok [INFO] [stdout] test codecs::rans_4x8::tests::test_self_0 ... ok [INFO] [stdout] test codecs::rans_nx16::decode::tests::test_decode_order_0 ... ok [INFO] [stdout] test codecs::rans_nx16::decode::tests::test_decode_bit_packing_with_6_symbols ... ok [INFO] [stdout] test codecs::rans_nx16::decode::tests::test_decode_rle ... ok [INFO] [stdout] test codecs::rans_nx16::decode::tests::test_decode_stripe ... ok [INFO] [stdout] test codecs::rans_nx16::decode::tests::test_decode_uncompressed ... ok [INFO] [stdout] test codecs::rans_nx16::encode::tests::test_encode_order_0 ... ok [INFO] [stdout] test codecs::rans_nx16::encode::tests::test_encode_order_1 ... ok [INFO] [stdout] test codecs::rans_nx16::decode::tests::test_decode_order_1 ... ok [INFO] [stdout] test codecs::rans_nx16::encode::tests::test_encode_pack ... ok [INFO] [stdout] test codecs::rans_nx16::encode::tests::test_encode_stripe ... ok [INFO] [stdout] test codecs::rans_nx16::encode::tests::test_encode_uncompressed ... ok [INFO] [stdout] test container::block::compression_method::tests::test_default ... ok [INFO] [stdout] test container::compression_header::data_series_encodings::data_series::tests::test_from_data_series_for_u8_array ... ok [INFO] [stdout] test container::compression_header::data_series_encodings::data_series::tests::test_try_from_byte_array_for_data_series ... ok [INFO] [stdout] test codecs::rans_nx16::encode::tests::test_encode_rle ... ok [INFO] [stdout] test container::compression_header::encoding::codec::byte::tests::test_decode ... ok [INFO] [stdout] test container::compression_header::encoding::codec::byte::tests::test_decode_take ... ok [INFO] [stdout] test container::compression_header::encoding::codec::byte::tests::test_encode ... ok [INFO] [stdout] test container::compression_header::encoding::codec::byte_array::tests::test_decode ... ok [INFO] [stdout] test container::compression_header::encoding::codec::byte_array::tests::test_encode ... ok [INFO] [stdout] test container::compression_header::encoding::codec::integer::tests::test_encode ... ok [INFO] [stdout] test container::compression_header::preservation_map::key::tests::test_from_key_for_u8_array ... ok [INFO] [stdout] test container::compression_header::preservation_map::key::tests::test_try_from_u8_array_for_key ... ok [INFO] [stdout] test container::compression_header::preservation_map::substitution_matrix::base::tests::test_from_base_for_u8 ... ok [INFO] [stdout] test container::compression_header::preservation_map::substitution_matrix::base::tests::test_try_from_u8_for_base ... ok [INFO] [stdout] test container::compression_header::preservation_map::substitution_matrix::tests::test_find ... ok [INFO] [stdout] test container::compression_header::preservation_map::tag_sets::key::tests::test_from_key_for_block_content_id ... ok [INFO] [stdout] test container::reference_sequence_context::tests::test_alignment_span ... ok [INFO] [stdout] test container::reference_sequence_context::tests::test_try_from_i32_i32_i32_for_reference_sequence_context ... ok [INFO] [stdout] test container::reference_sequence_context::tests::test_update ... ok [INFO] [stdout] test codecs::rans_4x8::decode::tests::test_decode_with_order_1 ... ok [INFO] [stdout] test container::compression_header::encoding::codec::integer::tests::test_decode ... ok [INFO] [stdout] test crai::io::writer::tests::test_write_record ... ok [INFO] [stdout] test crai::record::tests::test_fmt ... ok [INFO] [stdout] test crai::record::tests::test_from_str_with_invalid_records ... ok [INFO] [stdout] test file_definition::tests::test_default ... ok [INFO] [stdout] test file_definition::version::tests::test_default ... ok [INFO] [stdout] test huffman::tests::test_build_canonical_code_book ... ok [INFO] [stdout] test huffman::tests::test_decode ... ok [INFO] [stdout] test io::bit_reader::tests::test_read_u32 ... ok [INFO] [stdout] test io::bit_writer::tests::test_write_u32 ... ok [INFO] [stdout] test crai::io::reader::tests::test_read_index ... ok [INFO] [stdout] test io::bit_writer::tests::test_write_u32_with_0_len ... ok [INFO] [stdout] test io::indexed_reader::builder::tests::test_build_index_src ... ok [INFO] [stdout] test crai::record::tests::test_from_str ... ok [INFO] [stdout] test io::reader::container::block::compression_method::tests::test_get_compression_method ... ok [INFO] [stdout] test io::reader::container::block::content_type::tests::test_decode ... ok [INFO] [stdout] test io::reader::container::block::compression_method::tests::test_decode ... ok [INFO] [stdout] test io::reader::container::block::content_type::tests::test_read_content_type ... ok [INFO] [stdout] test io::reader::container::block::tests::test_read_block ... ok [INFO] [stdout] test io::reader::container::block::tests::test_read_block_with_empty_block ... ok [INFO] [stdout] test io::reader::container::compression_header::data_series_encodings::tests::test_read_data_series_encodings ... ok [INFO] [stdout] test io::reader::container::compression_header::encoding::tests::test_read_beta_codec ... ok [INFO] [stdout] test io::reader::container::compression_header::encoding::tests::test_read_byte_array_length_codec ... ok [INFO] [stdout] test io::bit_writer::tests::test_write_u32_with_length_greater_than_32_bits ... ok [INFO] [stdout] test io::reader::container::compression_header::encoding::tests::test_read_byte_array_stop_codec ... ok [INFO] [stdout] test io::reader::container::compression_header::encoding::tests::test_read_external_codec ... ok [INFO] [stdout] test io::reader::container::compression_header::encoding::tests::test_read_golomb_codec ... ok [INFO] [stdout] test io::reader::container::compression_header::encoding::tests::test_read_golomb_rice_codec ... ok [INFO] [stdout] test io::reader::container::compression_header::encoding::tests::test_read_huffman_codec ... ok [INFO] [stdout] test io::reader::container::compression_header::encoding::tests::test_read_kind ... ok [INFO] [stdout] test io::reader::container::compression_header::encoding::tests::test_read_subexp_codec ... ok [INFO] [stdout] test io::reader::container::compression_header::preservation_map::tag_sets::tests::test_decode_type ... ok [INFO] [stdout] test io::reader::container::compression_header::preservation_map::substitution_matrix::tests::test_read_substitution_matrix ... ok [INFO] [stdout] test io::reader::container::compression_header::encoding::tests::test_read_gamma_codec ... ok [INFO] [stdout] test io::reader::container::compression_header::preservation_map::tests::test_read_bool ... ok [INFO] [stdout] test io::reader::container::compression_header::preservation_map::tests::test_read_preservation_map_with_no_substitution_matrix ... ok [INFO] [stdout] test io::reader::container::compression_header::preservation_map::tests::test_read_preservation_map ... ok [INFO] [stdout] test io::reader::container::compression_header::preservation_map::tests::test_read_preservation_map_with_no_tag_ids_dictionary ... ok [INFO] [stdout] test io::reader::container::header::tests::test_read_header ... ok [INFO] [stdout] test io::reader::container::header::tests::test_read_header_with_eof ... ok [INFO] [stdout] test io::reader::container::slice::header::tests::test_read_header_inner ... ok [INFO] [stdout] test io::reader::container::header::tests::test_read_header_with_a_checksum_mismatch ... ok [INFO] [stdout] test io::reader::container::slice::tests::test_calculate_template_length ... ok [INFO] [stdout] test io::reader::container::slice::tests::test_resolve_mates ... ok [INFO] [stdout] test io::reader::header::format_version::tests::test_read_format_version ... ok [INFO] [stdout] test io::reader::header::magic_number::tests::test_is_valid ... ok [INFO] [stdout] test io::reader::header::magic_number::tests::test_read_magic_number ... ok [INFO] [stdout] test io::reader::header::container::sam_header::tests::test_read_with_trailing_nul_padding ... ok [INFO] [stdout] test io::reader::header::tests::test_read_file_definition ... ok [INFO] [stdout] test io::reader::num::itf8::tests::test_read_itf8 ... ok [INFO] [stdout] test io::reader::header::file_id::tests::test_read_file_id ... ok [INFO] [stdout] test io::reader::num::ltf8::tests::test_read_ltf8 ... ok [INFO] [stdout] test io::writer::builder::tests::test_uses_cram_3_1_codecs ... ok [INFO] [stdout] test io::writer::container::block::compression_method::tests::test_encode ... ok [INFO] [stdout] test codecs::rans_4x8::tests::test_self_1 ... ok [INFO] [stdout] test io::writer::container::block::content_type::tests::test_encode ... ok [INFO] [stdout] test io::writer::container::block::content_type::tests::test_write_content_type ... ok [INFO] [stdout] test io::writer::container::block::tests::test_itf8_size_of ... ok [INFO] [stdout] test io::reader::num::vlq::tests::test_read_uint7 ... ok [INFO] [stdout] test io::writer::container::block::compression_method::tests::test_write_compression_method ... ok [INFO] [stdout] test io::writer::container::compression_header::encoding::tests::test_write_beta_codec ... ok [INFO] [stdout] test io::writer::container::compression_header::encoding::tests::test_write_byte_array_length_codec ... ok [INFO] [stdout] test io::writer::container::compression_header::encoding::tests::test_write_byte_array_stop_codec ... ok [INFO] [stdout] test io::writer::container::compression_header::encoding::tests::test_write_external_codec ... ok [INFO] [stdout] test io::writer::container::block::tests::test_write_block ... ok [INFO] [stdout] test io::writer::container::compression_header::encoding::tests::test_write_golomb_rice_codec ... ok [INFO] [stdout] test io::writer::container::compression_header::data_series_encodings::tests::test_data_series_encodings_len ... ok [INFO] [stdout] test io::writer::container::compression_header::encoding::tests::test_write_golomb_codec ... ok [INFO] [stdout] test io::writer::container::compression_header::encoding::tests::test_write_gamma_codec ... ok [INFO] [stdout] test io::writer::container::compression_header::encoding::tests::test_write_huffman_codec ... ok [INFO] [stdout] test io::writer::container::compression_header::encoding::tests::test_write_subexp_codec ... ok [INFO] [stdout] test codecs::fqzcomp::encode::tests::test_encode ... ok [INFO] [stdout] test io::writer::container::compression_header::preservation_map::substitution_matrix::frequencies::tests::test_from_frequencies_for_substitution_matrix ... ok [INFO] [stdout] test io::writer::container::compression_header::preservation_map::substitution_matrix::frequencies::tests::test_row ... ok [INFO] [stdout] test io::writer::container::compression_header::preservation_map::substitution_matrix::tests::test_encode ... ok [INFO] [stdout] test io::writer::container::compression_header::preservation_map::tag_sets::tests::test_write_tag_sets ... ok [INFO] [stdout] test io::writer::container::compression_header::preservation_map::substitution_matrix::frequencies::tests::test_hit ... ok [INFO] [stdout] test io::writer::header::container::tests::test_validate_reference_sequences ... ok [INFO] [stdout] test io::writer::header::magic_number::tests::test_write_magic_number ... ok [INFO] [stdout] test io::writer::header::tests::test_add_missing_reference_sequence_checksums ... ok [INFO] [stdout] test io::writer::num::vlq::tests::test_write_uint7 ... ok [INFO] [stdout] test io::writer::header::container::tests::test_write_container ... ok [INFO] [stdout] test io::writer::header::file_id::tests::test_write_file_id ... ok [INFO] [stdout] test io::writer::num::itf8::tests::test_write_itf8 ... ok [INFO] [stdout] test io::writer::record::convert::tests::test_cigar_to_features ... ok [INFO] [stdout] test io::writer::num::ltf8::tests::test_write_ltf8 ... ok [INFO] [stdout] test io::writer::record::convert::tests::test_cigar_to_features_with_quality_scores_stored_as_array ... ok [INFO] [stdout] test record::cigar::iter::tests::test_next ... ok [INFO] [stdout] test record::data::iter::tests::test_size_hint ... ok [INFO] [stdout] test record::feature::code::tests::test_from_code_for_u8 ... ok [INFO] [stdout] test record::feature::code::tests::test_try_from_u8_for_code ... ok [INFO] [stdout] test record::feature::tests::test_position ... ok [INFO] [stdout] test record::quality_scores::iter::tests::test_iter ... ok [INFO] [stdout] test record::sequence::iter::tests::test_next ... ok [INFO] [stdout] test codecs::fqzcomp::decode::tests::test_decode ... ok [INFO] [stdout] test record::quality_scores::iter::tests::test_size_hint ... ok [INFO] [stdout] test record::sequence::iter::tests::test_size_hint ... ok [INFO] [stdout] test record::tests::test_calculate_alignment_span ... ok [INFO] [stdout] test record::sequence::iter::with_positions::tests::test_next ... ok [INFO] [stdout] test tests::test_calculate_normalized_sequence_digest ... ok [INFO] [stdout] test codecs::fqzcomp::encode::tests::test_encode_with_do_len ... ok [INFO] [stdout] test codecs::fqzcomp::tests::test_self ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 168 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.58s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "303692be1b2748123943b4e8efb4cebac3a69d281182c13d4f7e2277d3a0766d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "303692be1b2748123943b4e8efb4cebac3a69d281182c13d4f7e2277d3a0766d", kill_on_drop: false }` [INFO] [stdout] 303692be1b2748123943b4e8efb4cebac3a69d281182c13d4f7e2277d3a0766d