[INFO] fetching crate noodles-bam 0.81.0... [INFO] testing noodles-bam-0.81.0 against try#8de4c7234dd9b97c9d76b58671343fdbbc9a433e+target=x86_64-unknown-linux-musl for musl_upgrade_1_2_5_with_libc_patch_0 [INFO] extracting crate noodles-bam 0.81.0 into /workspace/builds/worker-0-tc1/source [INFO] started tweaking crates.io crate noodles-bam 0.81.0 [INFO] removed 0 missing examples [INFO] finished tweaking crates.io crate noodles-bam 0.81.0 [INFO] tweaked toml for crates.io crate noodles-bam 0.81.0 written to /workspace/builds/worker-0-tc1/source/Cargo.toml [INFO] validating manifest of crates.io crate noodles-bam 0.81.0 on toolchain 8de4c7234dd9b97c9d76b58671343fdbbc9a433e [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate noodles-bam 0.81.0 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded noodles-core v0.17.0 [INFO] [stderr] Downloaded noodles-bgzf v0.41.0 [INFO] [stderr] Downloaded noodles-csi v0.49.0 [INFO] [stderr] Downloaded noodles-sam v0.77.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:90999bfc7ae267e83380e433d8e61a7c072ca6729e92edbae886d3423b3a6f4c" "/opt/rustwide/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 930150d3dde6fcad9259e17616ea715f338217f363ff4e5f1d0efa2b5ea3cfbf [INFO] running `Command { std: "docker" "start" "-a" "930150d3dde6fcad9259e17616ea715f338217f363ff4e5f1d0efa2b5ea3cfbf", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "930150d3dde6fcad9259e17616ea715f338217f363ff4e5f1d0efa2b5ea3cfbf", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "930150d3dde6fcad9259e17616ea715f338217f363ff4e5f1d0efa2b5ea3cfbf", kill_on_drop: false }` [INFO] [stdout] 930150d3dde6fcad9259e17616ea715f338217f363ff4e5f1d0efa2b5ea3cfbf [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:90999bfc7ae267e83380e433d8e61a7c072ca6729e92edbae886d3423b3a6f4c" "/opt/rustwide/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "build" "--frozen" "--message-format=json" "--target" "x86_64-unknown-linux-musl", kill_on_drop: false }` [INFO] [stdout] ee3660808129ca00fd35558140fbf0ff1e508b6ffa7031b1dde70fc7b5981cf5 [INFO] running `Command { std: "docker" "start" "-a" "ee3660808129ca00fd35558140fbf0ff1e508b6ffa7031b1dde70fc7b5981cf5", kill_on_drop: false }` [INFO] [stderr] Compiling static_assertions v1.1.0 [INFO] [stderr] Compiling crossbeam-utils v0.8.21 [INFO] [stderr] Compiling cfg-if v1.0.0 [INFO] [stderr] Compiling zlib-rs v0.5.0 [INFO] [stderr] Compiling memchr v2.7.4 [INFO] [stderr] Compiling bytes v1.10.1 [INFO] [stderr] Compiling byteorder v1.5.0 [INFO] [stderr] Compiling equivalent v1.0.2 [INFO] [stderr] Compiling hashbrown v0.15.3 [INFO] [stderr] Compiling bit-vec v0.8.0 [INFO] [stderr] Compiling bitflags v2.9.1 [INFO] [stderr] Compiling crc32fast v1.4.2 [INFO] [stderr] Compiling lexical-util v1.0.6 [INFO] [stderr] Compiling indexmap v2.9.0 [INFO] [stderr] Compiling bstr v1.12.0 [INFO] [stderr] Compiling lexical-parse-integer v1.0.5 [INFO] [stderr] Compiling lexical-write-integer v1.0.5 [INFO] [stderr] Compiling crossbeam-channel v0.5.15 [INFO] [stderr] Compiling lexical-parse-float v1.0.5 [INFO] [stderr] Compiling lexical-write-float v1.0.5 [INFO] [stderr] Compiling noodles-core v0.17.0 [INFO] [stderr] Compiling lexical-core v1.0.5 [INFO] [stderr] Compiling libz-rs-sys v0.5.0 [INFO] [stderr] Compiling flate2 v1.1.1 [INFO] [stderr] Compiling noodles-bgzf v0.41.0 [INFO] [stderr] Compiling noodles-csi v0.49.0 [INFO] [stderr] Compiling noodles-sam v0.77.0 [INFO] [stderr] Compiling noodles-bam v0.81.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 11.40s [INFO] running `Command { std: "docker" "inspect" "ee3660808129ca00fd35558140fbf0ff1e508b6ffa7031b1dde70fc7b5981cf5", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "ee3660808129ca00fd35558140fbf0ff1e508b6ffa7031b1dde70fc7b5981cf5", kill_on_drop: false }` [INFO] [stdout] ee3660808129ca00fd35558140fbf0ff1e508b6ffa7031b1dde70fc7b5981cf5 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:90999bfc7ae267e83380e433d8e61a7c072ca6729e92edbae886d3423b3a6f4c" "/opt/rustwide/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "test" "--frozen" "--no-run" "--message-format=json" "--target" "x86_64-unknown-linux-musl", kill_on_drop: false }` [INFO] [stdout] c46ab9720d206d7c0313c6f1f635ac21f94c4bc48b0203617359752aa680b339 [INFO] running `Command { std: "docker" "start" "-a" "c46ab9720d206d7c0313c6f1f635ac21f94c4bc48b0203617359752aa680b339", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.95 [INFO] [stderr] Compiling unicode-ident v1.0.18 [INFO] [stderr] Compiling autocfg v1.4.0 [INFO] [stderr] Compiling pin-project-lite v0.2.16 [INFO] [stderr] Compiling futures-sink v0.3.31 [INFO] [stderr] Compiling futures-core v0.3.31 [INFO] [stderr] Compiling pin-utils v0.1.0 [INFO] [stderr] Compiling futures-io v0.3.31 [INFO] [stderr] Compiling futures-task v0.3.31 [INFO] [stderr] Compiling futures-channel v0.3.31 [INFO] [stderr] Compiling quote v1.0.40 [INFO] [stderr] Compiling slab v0.4.9 [INFO] [stderr] Compiling syn v2.0.101 [INFO] [stderr] Compiling futures-util v0.3.31 [INFO] [stderr] Compiling futures v0.3.31 [INFO] [stderr] Compiling tokio-macros v2.5.0 [INFO] [stderr] Compiling tokio v1.45.1 [INFO] [stderr] Compiling tokio-util v0.7.15 [INFO] [stderr] Compiling noodles-bgzf v0.41.0 [INFO] [stderr] Compiling noodles-csi v0.49.0 [INFO] [stderr] Compiling noodles-sam v0.77.0 [INFO] [stderr] Compiling noodles-bam v0.81.0 (/opt/rustwide/workdir) [INFO] [stderr] error: could not compile `noodles-bam` (lib test) [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/rustup-home/toolchains/8de4c7234dd9b97c9d76b58671343fdbbc9a433e/bin/rustc --crate-name noodles_bam --edition=2021 src/lib.rs --error-format=json --json=diagnostic-rendered-ansi,artifacts,future-incompat --emit=dep-info,link -C embed-bitcode=no -C debuginfo=2 --warn=missing_docs --test --check-cfg 'cfg(docsrs,test)' --check-cfg 'cfg(feature, values("async"))' -C metadata=13e2bc1e7eacfb09 -C extra-filename=-6b6ca5d581888ab5 --out-dir /opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps --target x86_64-unknown-linux-musl -L dependency=/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps -L dependency=/opt/rustwide/target/debug/deps --extern bstr=/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/libbstr-46ff03feb9d4c1ec.rlib --extern byteorder=/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/libbyteorder-1e24148c060ae1e7.rlib --extern flate2=/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/libflate2-84f36d61e7d0852a.rlib --extern indexmap=/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/libindexmap-24fc7e32692e23c2.rlib --extern memchr=/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/libmemchr-8eb551391861f369.rlib --extern noodles_bgzf=/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/libnoodles_bgzf-d3a764e728016c0b.rlib --extern noodles_core=/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/libnoodles_core-754057ea325d26da.rlib --extern noodles_csi=/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/libnoodles_csi-d81facb668ea29c1.rlib --extern noodles_sam=/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/libnoodles_sam-906586aa636a7d7e.rlib --extern tokio=/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/libtokio-2645d8e6c5088fe3.rlib --cap-lints=forbid` (signal: 9, SIGKILL: kill) [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: could not compile `noodles-bam` (example "bam_query") [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/rustup-home/toolchains/8de4c7234dd9b97c9d76b58671343fdbbc9a433e/bin/rustc --crate-name bam_query --edition=2021 examples/bam_query.rs --error-format=json --json=diagnostic-rendered-ansi,artifacts,future-incompat --crate-type bin --emit=dep-info,link -C embed-bitcode=no -C debuginfo=2 --warn=missing_docs --check-cfg 'cfg(docsrs,test)' --check-cfg 'cfg(feature, values("async"))' -C metadata=fe6cc7c905321fce -C extra-filename=-fb1fb71710df4eed --out-dir /opt/rustwide/target/x86_64-unknown-linux-musl/debug/examples --target x86_64-unknown-linux-musl -L dependency=/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps -L dependency=/opt/rustwide/target/debug/deps --extern bstr=/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/libbstr-46ff03feb9d4c1ec.rlib --extern byteorder=/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/libbyteorder-1e24148c060ae1e7.rlib --extern flate2=/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/libflate2-84f36d61e7d0852a.rlib --extern indexmap=/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/libindexmap-24fc7e32692e23c2.rlib --extern memchr=/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/libmemchr-8eb551391861f369.rlib --extern noodles_bam=/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/libnoodles_bam-b7c33392d145c045.rlib --extern noodles_bgzf=/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/libnoodles_bgzf-d3a764e728016c0b.rlib --extern noodles_core=/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/libnoodles_core-754057ea325d26da.rlib --extern noodles_csi=/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/libnoodles_csi-d81facb668ea29c1.rlib --extern noodles_sam=/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/libnoodles_sam-906586aa636a7d7e.rlib --extern tokio=/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/libtokio-2645d8e6c5088fe3.rlib --cap-lints=forbid` (signal: 9, SIGKILL: kill) [INFO] [stderr] error: could not compile `noodles-bam` (example "bam_reset") [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/rustup-home/toolchains/8de4c7234dd9b97c9d76b58671343fdbbc9a433e/bin/rustc --crate-name bam_reset --edition=2021 examples/bam_reset.rs --error-format=json --json=diagnostic-rendered-ansi,artifacts,future-incompat --crate-type bin --emit=dep-info,link -C embed-bitcode=no -C debuginfo=2 --warn=missing_docs --check-cfg 'cfg(docsrs,test)' --check-cfg 'cfg(feature, values("async"))' -C metadata=57f8795da6ff92c9 -C extra-filename=-01cadecbcd183d47 --out-dir /opt/rustwide/target/x86_64-unknown-linux-musl/debug/examples --target x86_64-unknown-linux-musl -L dependency=/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps -L dependency=/opt/rustwide/target/debug/deps --extern bstr=/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/libbstr-46ff03feb9d4c1ec.rlib --extern byteorder=/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/libbyteorder-1e24148c060ae1e7.rlib --extern flate2=/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/libflate2-84f36d61e7d0852a.rlib --extern indexmap=/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/libindexmap-24fc7e32692e23c2.rlib --extern memchr=/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/libmemchr-8eb551391861f369.rlib --extern noodles_bam=/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/libnoodles_bam-b7c33392d145c045.rlib --extern noodles_bgzf=/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/libnoodles_bgzf-d3a764e728016c0b.rlib --extern noodles_core=/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/libnoodles_core-754057ea325d26da.rlib --extern noodles_csi=/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/libnoodles_csi-d81facb668ea29c1.rlib --extern noodles_sam=/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/libnoodles_sam-906586aa636a7d7e.rlib --extern tokio=/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/libtokio-2645d8e6c5088fe3.rlib --cap-lints=forbid` (signal: 9, SIGKILL: kill) [INFO] [stdout] error: linking with `cc` failed: exit status: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-m64" "/lib/rustlib/x86_64-unknown-linux-musl/lib/self-contained/rcrt1.o" "/lib/rustlib/x86_64-unknown-linux-musl/lib/self-contained/crti.o" "/lib/rustlib/x86_64-unknown-linux-musl/lib/self-contained/crtbeginS.o" "/tmp/rustcqdXuZ5/symbols.o" "<3 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/{libnoodles_bam-b7c33392d145c045.rlib,libnoodles_sam-906586aa636a7d7e.rlib,libbitflags-f034ce1dbc73dff8.rlib,liblexical_core-59f4db7adfa9d5ae.rlib,liblexical_write_float-bd8731ae6380b2f5.rlib,liblexical_write_integer-851886677b3ecce8.rlib,liblexical_parse_float-64abbe81033c0d9d.rlib,liblexical_parse_integer-ac006d1865fd9ab3.rlib,liblexical_util-1c339edc9ec90c3b.rlib,libstatic_assertions-df27c3b343cf637f.rlib,libnoodles_csi-d81facb668ea29c1.rlib,libbit_vec-c394b207524e2e4c.rlib,libnoodles_core-754057ea325d26da.rlib,libbstr-46ff03feb9d4c1ec.rlib,libnoodles_bgzf-d3a764e728016c0b.rlib,libcrossbeam_channel-4ac2eca0b27e6d69.rlib,libcrossbeam_utils-3e8757fdca4554a3.rlib,libflate2-84f36d61e7d0852a.rlib,liblibz_rs_sys-6f159ea4d27dabb7.rlib,libzlib_rs-21778bd5ad6f5797.rlib,libcrc32fast-252d6aa5d41b36e0.rlib,libcfg_if-66d55f6b302e88c8.rlib,libfutures-e3f2fb70392c1713.rlib,libfutures_util-2a3453888bc4f497.rlib,libmemchr-8eb551391861f369.rlib,libfutures_io-48a223b618848720.rlib,libslab-14567880f3b21ac9.rlib,libfutures_channel-3f178bbe859656d0.rlib,libfutures_task-668b9442d038e652.rlib,libpin_utils-b08f1197f0cdae19.rlib,libtokio_util-714d5ffc236e66f2.rlib,libfutures_core-aea49b3401aac6bb.rlib,libfutures_sink-5bcde6d6efedd2a7.rlib,libtokio-2645d8e6c5088fe3.rlib,libbytes-0deeb68a8e6966b8.rlib,libpin_project_lite-0d5016e1f2870cc0.rlib,libindexmap-24fc7e32692e23c2.rlib,libequivalent-c8ca4e154c540f6d.rlib,libhashbrown-937b32fc83f12055.rlib,libbyteorder-1e24148c060ae1e7.rlib}.rlib" "/lib/rustlib/x86_64-unknown-linux-musl/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*}.rlib" "-lunwind" "/lib/rustlib/x86_64-unknown-linux-musl/lib/{libcfg_if-*,liblibc-*}.rlib" "-lc" "/lib/rustlib/x86_64-unknown-linux-musl/lib/{librustc_std_workspace_core-*,liballoc-*,libcore-*,libcompiler_builtins-*}.rlib" "-L" "/tmp/rustcqdXuZ5/raw-dylibs" "-Wl,-Bdynamic" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-nostartfiles" "-L" "/lib/rustlib/x86_64-unknown-linux-musl/lib/self-contained" "-L" "/lib/rustlib/x86_64-unknown-linux-musl/lib" "-o" "/opt/rustwide/target/x86_64-unknown-linux-musl/debug/examples/bam_cat-155980a0530690c8" "-Wl,--gc-sections" "-static-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs" "/lib/rustlib/x86_64-unknown-linux-musl/lib/self-contained/crtendS.o" "/lib/rustlib/x86_64-unknown-linux-musl/lib/self-contained/crtn.o" [INFO] [stdout] = note: some arguments are omitted. use `--verbose` to show all linker arguments [INFO] [stdout] = note: collect2: fatal error: ld terminated with signal 9 [Killed] [INFO] [stdout] compilation terminated. [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] error: could not compile `noodles-bam` (example "bam_cat") due to 1 previous error [INFO] [stdout] error: linking with `cc` failed: exit status: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-m64" "/lib/rustlib/x86_64-unknown-linux-musl/lib/self-contained/rcrt1.o" "/lib/rustlib/x86_64-unknown-linux-musl/lib/self-contained/crti.o" "/lib/rustlib/x86_64-unknown-linux-musl/lib/self-contained/crtbeginS.o" "/tmp/rustcRoEcEj/symbols.o" "<3 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/{libnoodles_bam-b7c33392d145c045.rlib,libnoodles_sam-906586aa636a7d7e.rlib,libbitflags-f034ce1dbc73dff8.rlib,liblexical_core-59f4db7adfa9d5ae.rlib,liblexical_write_float-bd8731ae6380b2f5.rlib,liblexical_write_integer-851886677b3ecce8.rlib,liblexical_parse_float-64abbe81033c0d9d.rlib,liblexical_parse_integer-ac006d1865fd9ab3.rlib,liblexical_util-1c339edc9ec90c3b.rlib,libstatic_assertions-df27c3b343cf637f.rlib,libnoodles_csi-d81facb668ea29c1.rlib,libbit_vec-c394b207524e2e4c.rlib,libnoodles_core-754057ea325d26da.rlib,libbstr-46ff03feb9d4c1ec.rlib,libnoodles_bgzf-d3a764e728016c0b.rlib,libcrossbeam_channel-4ac2eca0b27e6d69.rlib,libcrossbeam_utils-3e8757fdca4554a3.rlib,libflate2-84f36d61e7d0852a.rlib,liblibz_rs_sys-6f159ea4d27dabb7.rlib,libzlib_rs-21778bd5ad6f5797.rlib,libcrc32fast-252d6aa5d41b36e0.rlib,libcfg_if-66d55f6b302e88c8.rlib,libfutures-e3f2fb70392c1713.rlib,libfutures_util-2a3453888bc4f497.rlib,libmemchr-8eb551391861f369.rlib,libfutures_io-48a223b618848720.rlib,libslab-14567880f3b21ac9.rlib,libfutures_channel-3f178bbe859656d0.rlib,libfutures_task-668b9442d038e652.rlib,libpin_utils-b08f1197f0cdae19.rlib,libtokio_util-714d5ffc236e66f2.rlib,libfutures_core-aea49b3401aac6bb.rlib,libfutures_sink-5bcde6d6efedd2a7.rlib,libtokio-2645d8e6c5088fe3.rlib,libbytes-0deeb68a8e6966b8.rlib,libpin_project_lite-0d5016e1f2870cc0.rlib,libindexmap-24fc7e32692e23c2.rlib,libequivalent-c8ca4e154c540f6d.rlib,libhashbrown-937b32fc83f12055.rlib,libbyteorder-1e24148c060ae1e7.rlib}.rlib" "/lib/rustlib/x86_64-unknown-linux-musl/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*}.rlib" "-lunwind" "/lib/rustlib/x86_64-unknown-linux-musl/lib/{libcfg_if-*,liblibc-*}.rlib" "-lc" "/lib/rustlib/x86_64-unknown-linux-musl/lib/{librustc_std_workspace_core-*,liballoc-*,libcore-*,libcompiler_builtins-*}.rlib" "-L" "/tmp/rustcRoEcEj/raw-dylibs" "-Wl,-Bdynamic" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-nostartfiles" "-L" "/lib/rustlib/x86_64-unknown-linux-musl/lib/self-contained" "-L" "/lib/rustlib/x86_64-unknown-linux-musl/lib" "-o" "/opt/rustwide/target/x86_64-unknown-linux-musl/debug/examples/bam_write-ab6d74867e2296a3" "-Wl,--gc-sections" "-static-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs" "/lib/rustlib/x86_64-unknown-linux-musl/lib/self-contained/crtendS.o" "/lib/rustlib/x86_64-unknown-linux-musl/lib/self-contained/crtn.o" [INFO] [stdout] = note: some arguments are omitted. use `--verbose` to show all linker arguments [INFO] [stdout] = note: collect2: fatal error: ld terminated with signal 9 [Killed] [INFO] [stdout] compilation terminated. [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: linking with `cc` failed: exit status: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-m64" "/lib/rustlib/x86_64-unknown-linux-musl/lib/self-contained/rcrt1.o" "/lib/rustlib/x86_64-unknown-linux-musl/lib/self-contained/crti.o" "/lib/rustlib/x86_64-unknown-linux-musl/lib/self-contained/crtbeginS.o" "/tmp/rustcmT7zks/symbols.o" "<5 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/{libnoodles_bam-b7c33392d145c045.rlib,libnoodles_sam-906586aa636a7d7e.rlib,libbitflags-f034ce1dbc73dff8.rlib,liblexical_core-59f4db7adfa9d5ae.rlib,liblexical_write_float-bd8731ae6380b2f5.rlib,liblexical_write_integer-851886677b3ecce8.rlib,liblexical_parse_float-64abbe81033c0d9d.rlib,liblexical_parse_integer-ac006d1865fd9ab3.rlib,liblexical_util-1c339edc9ec90c3b.rlib,libstatic_assertions-df27c3b343cf637f.rlib,libnoodles_csi-d81facb668ea29c1.rlib,libbit_vec-c394b207524e2e4c.rlib,libnoodles_core-754057ea325d26da.rlib,libbstr-46ff03feb9d4c1ec.rlib,libnoodles_bgzf-d3a764e728016c0b.rlib,libcrossbeam_channel-4ac2eca0b27e6d69.rlib,libcrossbeam_utils-3e8757fdca4554a3.rlib,libflate2-84f36d61e7d0852a.rlib,liblibz_rs_sys-6f159ea4d27dabb7.rlib,libzlib_rs-21778bd5ad6f5797.rlib,libcrc32fast-252d6aa5d41b36e0.rlib,libcfg_if-66d55f6b302e88c8.rlib,libfutures-e3f2fb70392c1713.rlib,libfutures_util-2a3453888bc4f497.rlib,libmemchr-8eb551391861f369.rlib,libfutures_io-48a223b618848720.rlib,libslab-14567880f3b21ac9.rlib,libfutures_channel-3f178bbe859656d0.rlib,libfutures_task-668b9442d038e652.rlib,libpin_utils-b08f1197f0cdae19.rlib,libtokio_util-714d5ffc236e66f2.rlib,libfutures_core-aea49b3401aac6bb.rlib,libfutures_sink-5bcde6d6efedd2a7.rlib,libtokio-2645d8e6c5088fe3.rlib,libbytes-0deeb68a8e6966b8.rlib,libpin_project_lite-0d5016e1f2870cc0.rlib,libindexmap-24fc7e32692e23c2.rlib,libequivalent-c8ca4e154c540f6d.rlib,libhashbrown-937b32fc83f12055.rlib,libbyteorder-1e24148c060ae1e7.rlib}.rlib" "/lib/rustlib/x86_64-unknown-linux-musl/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*}.rlib" "-lunwind" "/lib/rustlib/x86_64-unknown-linux-musl/lib/{libcfg_if-*,liblibc-*}.rlib" "-lc" "/lib/rustlib/x86_64-unknown-linux-musl/lib/{librustc_std_workspace_core-*,liballoc-*,libcore-*,libcompiler_builtins-*}.rlib" "-L" "/tmp/rustcmT7zks/raw-dylibs" "-Wl,-Bdynamic" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-nostartfiles" "-L" "/lib/rustlib/x86_64-unknown-linux-musl/lib/self-contained" "-L" "/lib/rustlib/x86_64-unknown-linux-musl/lib" "-o" "/opt/rustwide/target/x86_64-unknown-linux-musl/debug/examples/bam_filter_data-26067360af947659" "-Wl,--gc-sections" "-static-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs" "/lib/rustlib/x86_64-unknown-linux-musl/lib/self-contained/crtendS.o" "/lib/rustlib/x86_64-unknown-linux-musl/lib/self-contained/crtn.o" [INFO] [stdout] = note: some arguments are omitted. use `--verbose` to show all linker arguments [INFO] [stdout] = note: collect2: fatal error: ld terminated with signal 9 [Killed] [INFO] [stdout] compilation terminated. [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] error: could not compile `noodles-bam` (example "bam_write") due to 1 previous error [INFO] [stderr] error: could not compile `noodles-bam` (example "bam_filter_data") due to 1 previous error [INFO] [stdout] error: linking with `cc` failed: exit status: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-m64" "/lib/rustlib/x86_64-unknown-linux-musl/lib/self-contained/rcrt1.o" "/lib/rustlib/x86_64-unknown-linux-musl/lib/self-contained/crti.o" "/lib/rustlib/x86_64-unknown-linux-musl/lib/self-contained/crtbeginS.o" "/tmp/rustc0qGefX/symbols.o" "<5 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/{libnoodles_bam-b7c33392d145c045.rlib,libnoodles_sam-906586aa636a7d7e.rlib,libbitflags-f034ce1dbc73dff8.rlib,liblexical_core-59f4db7adfa9d5ae.rlib,liblexical_write_float-bd8731ae6380b2f5.rlib,liblexical_write_integer-851886677b3ecce8.rlib,liblexical_parse_float-64abbe81033c0d9d.rlib,liblexical_parse_integer-ac006d1865fd9ab3.rlib,liblexical_util-1c339edc9ec90c3b.rlib,libstatic_assertions-df27c3b343cf637f.rlib,libnoodles_csi-d81facb668ea29c1.rlib,libbit_vec-c394b207524e2e4c.rlib,libnoodles_core-754057ea325d26da.rlib,libbstr-46ff03feb9d4c1ec.rlib,libnoodles_bgzf-d3a764e728016c0b.rlib,libcrossbeam_channel-4ac2eca0b27e6d69.rlib,libcrossbeam_utils-3e8757fdca4554a3.rlib,libflate2-84f36d61e7d0852a.rlib,liblibz_rs_sys-6f159ea4d27dabb7.rlib,libzlib_rs-21778bd5ad6f5797.rlib,libcrc32fast-252d6aa5d41b36e0.rlib,libcfg_if-66d55f6b302e88c8.rlib,libfutures-e3f2fb70392c1713.rlib,libfutures_util-2a3453888bc4f497.rlib,libmemchr-8eb551391861f369.rlib,libfutures_io-48a223b618848720.rlib,libslab-14567880f3b21ac9.rlib,libfutures_channel-3f178bbe859656d0.rlib,libfutures_task-668b9442d038e652.rlib,libpin_utils-b08f1197f0cdae19.rlib,libtokio_util-714d5ffc236e66f2.rlib,libfutures_core-aea49b3401aac6bb.rlib,libfutures_sink-5bcde6d6efedd2a7.rlib,libtokio-2645d8e6c5088fe3.rlib,libbytes-0deeb68a8e6966b8.rlib,libpin_project_lite-0d5016e1f2870cc0.rlib,libindexmap-24fc7e32692e23c2.rlib,libequivalent-c8ca4e154c540f6d.rlib,libhashbrown-937b32fc83f12055.rlib,libbyteorder-1e24148c060ae1e7.rlib}.rlib" "/lib/rustlib/x86_64-unknown-linux-musl/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*}.rlib" "-lunwind" "/lib/rustlib/x86_64-unknown-linux-musl/lib/{libcfg_if-*,liblibc-*}.rlib" "-lc" "/lib/rustlib/x86_64-unknown-linux-musl/lib/{librustc_std_workspace_core-*,liballoc-*,libcore-*,libcompiler_builtins-*}.rlib" "-L" "/tmp/rustc0qGefX/raw-dylibs" "-Wl,-Bdynamic" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-nostartfiles" "-L" "/lib/rustlib/x86_64-unknown-linux-musl/lib/self-contained" "-L" "/lib/rustlib/x86_64-unknown-linux-musl/lib" "-o" "/opt/rustwide/target/x86_64-unknown-linux-musl/debug/examples/bam_index-0159312d9bc84f69" "-Wl,--gc-sections" "-static-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs" "/lib/rustlib/x86_64-unknown-linux-musl/lib/self-contained/crtendS.o" "/lib/rustlib/x86_64-unknown-linux-musl/lib/self-contained/crtn.o" [INFO] [stdout] = note: some arguments are omitted. use `--verbose` to show all linker arguments [INFO] [stdout] = note: collect2: fatal error: ld terminated with signal 9 [Killed] [INFO] [stdout] compilation terminated. [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] error: could not compile `noodles-bam` (example "bam_index") due to 1 previous error [INFO] [stdout] error: linking with `cc` failed: exit status: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-m64" "/lib/rustlib/x86_64-unknown-linux-musl/lib/self-contained/rcrt1.o" "/lib/rustlib/x86_64-unknown-linux-musl/lib/self-contained/crti.o" "/lib/rustlib/x86_64-unknown-linux-musl/lib/self-contained/crtbeginS.o" "/tmp/rustcxMWfBB/symbols.o" "<3 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/{libnoodles_bam-b7c33392d145c045.rlib,libnoodles_sam-906586aa636a7d7e.rlib,libbitflags-f034ce1dbc73dff8.rlib,liblexical_core-59f4db7adfa9d5ae.rlib,liblexical_write_float-bd8731ae6380b2f5.rlib,liblexical_write_integer-851886677b3ecce8.rlib,liblexical_parse_float-64abbe81033c0d9d.rlib,liblexical_parse_integer-ac006d1865fd9ab3.rlib,liblexical_util-1c339edc9ec90c3b.rlib,libstatic_assertions-df27c3b343cf637f.rlib,libnoodles_csi-d81facb668ea29c1.rlib,libbit_vec-c394b207524e2e4c.rlib,libnoodles_core-754057ea325d26da.rlib,libbstr-46ff03feb9d4c1ec.rlib,libnoodles_bgzf-d3a764e728016c0b.rlib,libcrossbeam_channel-4ac2eca0b27e6d69.rlib,libcrossbeam_utils-3e8757fdca4554a3.rlib,libflate2-84f36d61e7d0852a.rlib,liblibz_rs_sys-6f159ea4d27dabb7.rlib,libzlib_rs-21778bd5ad6f5797.rlib,libcrc32fast-252d6aa5d41b36e0.rlib,libcfg_if-66d55f6b302e88c8.rlib,libfutures-e3f2fb70392c1713.rlib,libfutures_util-2a3453888bc4f497.rlib,libmemchr-8eb551391861f369.rlib,libfutures_io-48a223b618848720.rlib,libslab-14567880f3b21ac9.rlib,libfutures_channel-3f178bbe859656d0.rlib,libfutures_task-668b9442d038e652.rlib,libpin_utils-b08f1197f0cdae19.rlib,libtokio_util-714d5ffc236e66f2.rlib,libfutures_core-aea49b3401aac6bb.rlib,libfutures_sink-5bcde6d6efedd2a7.rlib,libtokio-2645d8e6c5088fe3.rlib,libbytes-0deeb68a8e6966b8.rlib,libpin_project_lite-0d5016e1f2870cc0.rlib,libindexmap-24fc7e32692e23c2.rlib,libequivalent-c8ca4e154c540f6d.rlib,libhashbrown-937b32fc83f12055.rlib,libbyteorder-1e24148c060ae1e7.rlib}.rlib" "/lib/rustlib/x86_64-unknown-linux-musl/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*}.rlib" "-lunwind" "/lib/rustlib/x86_64-unknown-linux-musl/lib/{libcfg_if-*,liblibc-*}.rlib" "-lc" "/lib/rustlib/x86_64-unknown-linux-musl/lib/{librustc_std_workspace_core-*,liballoc-*,libcore-*,libcompiler_builtins-*}.rlib" "-L" "/tmp/rustcxMWfBB/raw-dylibs" "-Wl,-Bdynamic" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-nostartfiles" "-L" "/lib/rustlib/x86_64-unknown-linux-musl/lib/self-contained" "-L" "/lib/rustlib/x86_64-unknown-linux-musl/lib" "-o" "/opt/rustwide/target/x86_64-unknown-linux-musl/debug/examples/bam_fastq-77dfa6d46a502077" "-Wl,--gc-sections" "-static-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs" "/lib/rustlib/x86_64-unknown-linux-musl/lib/self-contained/crtendS.o" "/lib/rustlib/x86_64-unknown-linux-musl/lib/self-contained/crtn.o" [INFO] [stdout] = note: some arguments are omitted. use `--verbose` to show all linker arguments [INFO] [stdout] = note: collect2: fatal error: ld terminated with signal 9 [Killed] [INFO] [stdout] compilation terminated. [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] error: could not compile `noodles-bam` (example "bam_fastq") due to 1 previous error [INFO] running `Command { std: "docker" "inspect" "c46ab9720d206d7c0313c6f1f635ac21f94c4bc48b0203617359752aa680b339", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "c46ab9720d206d7c0313c6f1f635ac21f94c4bc48b0203617359752aa680b339", kill_on_drop: false }` [INFO] [stdout] c46ab9720d206d7c0313c6f1f635ac21f94c4bc48b0203617359752aa680b339