[INFO] fetching crate gffkit 0.1.2...
[INFO] testing gffkit-0.1.2 against try#8de4c7234dd9b97c9d76b58671343fdbbc9a433e+target=x86_64-unknown-linux-musl for musl_upgrade_1_2_5_with_libc_patch_0
[INFO] extracting crate gffkit 0.1.2 into /workspace/builds/worker-6-tc1/source
[INFO] started tweaking crates.io crate gffkit 0.1.2
[INFO] finished tweaking crates.io crate gffkit 0.1.2
[INFO] tweaked toml for crates.io crate gffkit 0.1.2 written to /workspace/builds/worker-6-tc1/source/Cargo.toml
[INFO] validating manifest of crates.io crate gffkit 0.1.2 on toolchain 8de4c7234dd9b97c9d76b58671343fdbbc9a433e
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate crates.io crate gffkit 0.1.2 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded noodles v0.74.0
[INFO] [stderr]   Downloaded noodles-bgzf v0.30.0
[INFO] [stderr]   Downloaded noodles-fasta v0.38.0
[INFO] [stderr]   Downloaded human-sort v0.2.2
[INFO] [stderr]   Downloaded wide v0.7.20
[INFO] [stderr]   Downloaded noodles-core v0.15.0
[INFO] [stderr]   Downloaded noodles-gtf v0.28.0
[INFO] [stderr]   Downloaded noodles-csi v0.35.0
[INFO] [stderr]   Downloaded noodles-gff v0.33.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:90999bfc7ae267e83380e433d8e61a7c072ca6729e92edbae886d3423b3a6f4c" "/opt/rustwide/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 7875263a90b35f840c64ab3e3bdbaaa4e464c4622aaa25fedfdfecfe8e87af64
[INFO] running `Command { std: "docker" "start" "-a" "7875263a90b35f840c64ab3e3bdbaaa4e464c4622aaa25fedfdfecfe8e87af64", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "7875263a90b35f840c64ab3e3bdbaaa4e464c4622aaa25fedfdfecfe8e87af64", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "7875263a90b35f840c64ab3e3bdbaaa4e464c4622aaa25fedfdfecfe8e87af64", kill_on_drop: false }`
[INFO] [stdout] 7875263a90b35f840c64ab3e3bdbaaa4e464c4622aaa25fedfdfecfe8e87af64
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:90999bfc7ae267e83380e433d8e61a7c072ca6729e92edbae886d3423b3a6f4c" "/opt/rustwide/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "build" "--frozen" "--message-format=json" "--target" "x86_64-unknown-linux-musl", kill_on_drop: false }`
[INFO] [stdout] a2fb3c7900bd6480e0a5455cd131cc9cc1cd228a428ffc6e753a92ee5f68beaf
[INFO] running `Command { std: "docker" "start" "-a" "a2fb3c7900bd6480e0a5455cd131cc9cc1cd228a428ffc6e753a92ee5f68beaf", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.83
[INFO] [stderr]    Compiling unicode-ident v1.0.12
[INFO] [stderr]    Compiling autocfg v1.3.0
[INFO] [stderr]    Compiling libc v0.2.155
[INFO] [stderr]    Compiling libm v0.2.8
[INFO] [stderr]    Compiling cfg-if v1.0.0
[INFO] [stderr]    Compiling memchr v2.7.2
[INFO] [stderr]    Compiling crossbeam-utils v0.8.20
[INFO] [stderr]    Compiling pkg-config v0.3.30
[INFO] [stderr]    Compiling adler v1.0.2
[INFO] [stderr]    Compiling byteorder v1.5.0
[INFO] [stderr]    Compiling cc v1.0.98
[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]    Compiling equivalent v1.0.1
[INFO] [stderr]    Compiling serde v1.0.202
[INFO] [stderr]    Compiling hashbrown v0.14.5
[INFO] [stderr]    Compiling crc32fast v1.4.2
[INFO] [stderr]    Compiling bit-vec v0.6.3
[INFO] [stderr]    Compiling miniz_oxide v0.7.3
[INFO] [stderr]    Compiling bytemuck v1.16.0
[INFO] [stderr]    Compiling ppv-lite86 v0.2.17
[INFO] [stderr]    Compiling paste v1.0.15
[INFO] [stderr]    Compiling bytes v1.6.0
[INFO] [stderr]    Compiling safe_arch v0.7.1
[INFO] [stderr]    Compiling typenum v1.17.0
[INFO] [stderr]    Compiling rustix v0.38.34
[INFO] [stderr]    Compiling num-traits v0.2.19
[INFO] [stderr]    Compiling flate2 v1.0.30
[INFO] [stderr]    Compiling indexmap v2.2.6
[INFO] [stderr]    Compiling bstr v1.9.1
[INFO] [stderr]    Compiling matrixmultiply v0.3.8
[INFO] [stderr]    Compiling getrandom v0.2.15
[INFO] [stderr]    Compiling quote v1.0.36
[INFO] [stderr]    Compiling crossbeam-channel v0.5.13
[INFO] [stderr]    Compiling aho-corasick v1.1.3
[INFO] [stderr]    Compiling regex-syntax v0.8.3
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]    Compiling noodles-core v0.15.0
[INFO] [stderr]    Compiling rawpointer v0.2.1
[INFO] [stderr]    Compiling rand_core v0.6.4
[INFO] [stderr]    Compiling rustversion v1.0.17
[INFO] [stderr]    Compiling syn v2.0.65
[INFO] [stderr]    Compiling rand_chacha v0.3.1
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]    Compiling wide v0.7.20
[INFO] [stderr]    Compiling feature-probe v0.1.1
[INFO] [stderr]    Compiling noodles-bgzf v0.30.0
[INFO] [stderr]    Compiling num-integer v0.1.46
[INFO] [stderr]    Compiling num-complex v0.4.6
[INFO] [stderr]    Compiling rand v0.8.5
[INFO] [stderr]    Compiling approx v0.5.1
[INFO] [stderr]    Compiling bitflags v2.5.0
[INFO] [stderr]    Compiling linux-raw-sys v0.4.14
[INFO] [stderr]    Compiling utf8parse v0.2.1
[INFO] [stderr]    Compiling thiserror v1.0.61
[INFO] [stderr]    Compiling anstyle-parse v0.2.4
[INFO] [stderr]    Compiling noodles-csi v0.35.0
[INFO] [stderr]    Compiling num-rational v0.4.2
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling bzip2-sys v0.1.11+1.0.8
[INFO] [stderr]    Compiling lzma-sys v0.1.20
[INFO] [stderr]    Compiling bv v0.11.1
[INFO] [stderr]    Compiling colorchoice v1.0.1
[INFO] [stderr]    Compiling heck v0.4.1
[INFO] [stderr]    Compiling anstyle v1.0.7
[INFO] [stderr]    Compiling lazy_static v1.4.0
[INFO] [stderr]    Compiling anstyle-query v1.0.3
[INFO] [stderr]    Compiling anyhow v1.0.86
[INFO] [stderr]    Compiling rand_distr v0.4.3
[INFO] [stderr]    Compiling is_terminal_polyfill v1.70.0
[INFO] [stderr]    Compiling simba v0.6.0
[INFO] [stderr]    Compiling anstream v0.6.14
[INFO] [stderr]    Compiling regex-automata v0.4.6
[INFO] [stderr]    Compiling terminal_size v0.3.0
[INFO] [stderr]    Compiling csv-core v0.1.11
[INFO] [stderr]    Compiling percent-encoding v2.3.1
[INFO] [stderr]    Compiling itoa v1.0.11
[INFO] [stderr]    Compiling fixedbitset v0.4.2
[INFO] [stderr]    Compiling heck v0.5.0
[INFO] [stderr]    Compiling clap_lex v0.7.0
[INFO] [stderr]    Compiling ryu v1.0.18
[INFO] [stderr]    Compiling strsim v0.11.1
[INFO] [stderr]    Compiling either v1.12.0
[INFO] [stderr]    Compiling petgraph v0.6.5
[INFO] [stderr]    Compiling noodles-gff v0.33.0
[INFO] [stderr]    Compiling clap_builder v4.5.2
[INFO] [stderr]    Compiling itertools v0.11.0
[INFO] [stderr]    Compiling noodles-gtf v0.28.0
[INFO] [stderr]    Compiling ndarray v0.15.6
[INFO] [stderr]    Compiling noodles-fasta v0.38.0
[INFO] [stderr]    Compiling ordered-float v3.9.2
[INFO] [stderr]    Compiling itertools-num v0.1.3
[INFO] [stderr]    Compiling is-terminal v0.4.12
[INFO] [stderr]    Compiling bit-set v0.5.3
[INFO] [stderr]    Compiling fxhash v0.2.1
[INFO] [stderr]    Compiling custom_derive v0.1.7
[INFO] [stderr]    Compiling editdistancek v1.0.2
[INFO] [stderr]    Compiling humantime v2.1.0
[INFO] [stderr]    Compiling bytecount v0.6.8
[INFO] [stderr]    Compiling strum v0.25.0
[INFO] [stderr]    Compiling iana-time-zone v0.1.60
[INFO] [stderr]    Compiling log v0.4.21
[INFO] [stderr]    Compiling triple_accel v0.4.0
[INFO] [stderr]    Compiling termcolor v1.4.1
[INFO] [stderr]    Compiling noodles v0.74.0
[INFO] [stderr]    Compiling chrono v0.4.38
[INFO] [stderr]    Compiling bzip2 v0.4.4
[INFO] [stderr]    Compiling atty v0.2.14
[INFO] [stderr]    Compiling human-sort v0.2.2
[INFO] [stderr]    Compiling regex v1.10.4
[INFO] [stderr]    Compiling env_logger v0.10.2
[INFO] [stderr]    Compiling nalgebra-macros v0.1.0
[INFO] [stderr]    Compiling derive-new v0.5.9
[INFO] [stderr]    Compiling serde_derive v1.0.202
[INFO] [stderr]    Compiling thiserror-impl v1.0.61
[INFO] [stderr]    Compiling enum-map-derive v0.17.0
[INFO] [stderr]    Compiling strum_macros v0.25.3
[INFO] [stderr]    Compiling clap_derive v4.5.4
[INFO] [stderr]    Compiling enum-map v2.7.3
[INFO] [stderr]    Compiling nalgebra v0.29.0
[INFO] [stderr]    Compiling bio-types v1.0.1
[INFO] [stderr]    Compiling clap v4.5.4
[INFO] [stderr]    Compiling xz2 v0.1.7
[INFO] [stderr]    Compiling multimap v0.9.1
[INFO] [stderr]    Compiling csv v1.3.0
[INFO] [stderr]    Compiling vec_map v0.8.2
[INFO] [stderr]    Compiling statrs v0.16.0
[INFO] [stderr]    Compiling bio v1.6.0
[INFO] [stderr]    Compiling gffkit v0.1.2 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 44.73s
[INFO] running `Command { std: "docker" "inspect" "a2fb3c7900bd6480e0a5455cd131cc9cc1cd228a428ffc6e753a92ee5f68beaf", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "a2fb3c7900bd6480e0a5455cd131cc9cc1cd228a428ffc6e753a92ee5f68beaf", kill_on_drop: false }`
[INFO] [stdout] a2fb3c7900bd6480e0a5455cd131cc9cc1cd228a428ffc6e753a92ee5f68beaf
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:90999bfc7ae267e83380e433d8e61a7c072ca6729e92edbae886d3423b3a6f4c" "/opt/rustwide/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "test" "--frozen" "--no-run" "--message-format=json" "--target" "x86_64-unknown-linux-musl", kill_on_drop: false }`
[INFO] [stdout] 02a819b5f87164e52182e158246432e543cb54bdcdbf8029c46ef04d770d3818
[INFO] running `Command { std: "docker" "start" "-a" "02a819b5f87164e52182e158246432e543cb54bdcdbf8029c46ef04d770d3818", kill_on_drop: false }`
[INFO] [stderr]    Compiling gffkit v0.1.2 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.83s
[INFO] running `Command { std: "docker" "inspect" "02a819b5f87164e52182e158246432e543cb54bdcdbf8029c46ef04d770d3818", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "02a819b5f87164e52182e158246432e543cb54bdcdbf8029c46ef04d770d3818", kill_on_drop: false }`
[INFO] [stdout] 02a819b5f87164e52182e158246432e543cb54bdcdbf8029c46ef04d770d3818
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:90999bfc7ae267e83380e433d8e61a7c072ca6729e92edbae886d3423b3a6f4c" "/opt/rustwide/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "test" "--frozen" "--target" "x86_64-unknown-linux-musl", kill_on_drop: false }`
[INFO] [stdout] f08b09c850a6afad76e410a55948204e69c79064239421f9483a741ca49dbdee
[INFO] running `Command { std: "docker" "start" "-a" "f08b09c850a6afad76e410a55948204e69c79064239421f9483a741ca49dbdee", kill_on_drop: false }`
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.18s
[INFO] [stderr]      Running unittests src/main.rs (/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/gffkit-46a972c347cd9305)
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "f08b09c850a6afad76e410a55948204e69c79064239421f9483a741ca49dbdee", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "f08b09c850a6afad76e410a55948204e69c79064239421f9483a741ca49dbdee", kill_on_drop: false }`
[INFO] [stdout] f08b09c850a6afad76e410a55948204e69c79064239421f9483a741ca49dbdee