[INFO] fetching crate gb-io 0.9.0... [INFO] testing gb-io-0.9.0 against try#8de4c7234dd9b97c9d76b58671343fdbbc9a433e+target=x86_64-unknown-linux-musl for musl_upgrade_1_2_5_with_libc_patch_0 [INFO] extracting crate gb-io 0.9.0 into /workspace/builds/worker-6-tc1/source [INFO] started tweaking crates.io crate gb-io 0.9.0 [INFO] removed 0 missing examples [INFO] finished tweaking crates.io crate gb-io 0.9.0 [INFO] tweaked toml for crates.io crate gb-io 0.9.0 written to /workspace/builds/worker-6-tc1/source/Cargo.toml [INFO] validating manifest of crates.io crate gb-io 0.9.0 on toolchain 8de4c7234dd9b97c9d76b58671343fdbbc9a433e [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate gb-io 0.9.0 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded jiff-static v0.2.9 [INFO] [stderr] Downloaded jiff v0.2.9 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:90999bfc7ae267e83380e433d8e61a7c072ca6729e92edbae886d3423b3a6f4c" "/opt/rustwide/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] c4884bac9198e16b5cceb7db50dc2ec841c96bd5710f1424e7b2fd1187adb82f [INFO] running `Command { std: "docker" "start" "-a" "c4884bac9198e16b5cceb7db50dc2ec841c96bd5710f1424e7b2fd1187adb82f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "c4884bac9198e16b5cceb7db50dc2ec841c96bd5710f1424e7b2fd1187adb82f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "c4884bac9198e16b5cceb7db50dc2ec841c96bd5710f1424e7b2fd1187adb82f", kill_on_drop: false }` [INFO] [stdout] c4884bac9198e16b5cceb7db50dc2ec841c96bd5710f1424e7b2fd1187adb82f [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:90999bfc7ae267e83380e433d8e61a7c072ca6729e92edbae886d3423b3a6f4c" "/opt/rustwide/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "build" "--frozen" "--message-format=json" "--target" "x86_64-unknown-linux-musl", kill_on_drop: false }` [INFO] [stdout] f6b8f88bdcd1deb770a830581cf73f30ae8d8ec53ab401704d8a9fbf2b8314a9 [INFO] running `Command { std: "docker" "start" "-a" "f6b8f88bdcd1deb770a830581cf73f30ae8d8ec53ab401704d8a9fbf2b8314a9", kill_on_drop: false }` [INFO] [stderr] Compiling memchr v2.7.4 [INFO] [stderr] Compiling circular v0.3.0 [INFO] [stderr] Compiling itertools v0.14.0 [INFO] [stderr] Compiling syn v2.0.100 [INFO] [stderr] Compiling nom v8.0.0 [INFO] [stderr] Compiling thiserror-impl v2.0.12 [INFO] [stderr] Compiling thiserror v2.0.12 [INFO] [stderr] Compiling gb-io v0.9.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: lifetime flowing from input to output with different syntax can be confusing [INFO] [stdout] --> src/seq.rs:663:30 [INFO] [stdout] | [INFO] [stdout] 663 | pub fn extract_range_seq(&self, start: i64, end: i64) -> Cow<[u8]> { [INFO] [stdout] | ^^^^^ --------- the lifetime gets resolved as `'_` [INFO] [stdout] | | [INFO] [stdout] | this lifetime flows to the output [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default [INFO] [stdout] help: one option is to remove the lifetime for references and use the anonymous lifetime for paths [INFO] [stdout] | [INFO] [stdout] 663 | pub fn extract_range_seq(&self, start: i64, end: i64) -> Cow<'_, [u8]> { [INFO] [stdout] | +++ [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 9.19s [INFO] running `Command { std: "docker" "inspect" "f6b8f88bdcd1deb770a830581cf73f30ae8d8ec53ab401704d8a9fbf2b8314a9", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "f6b8f88bdcd1deb770a830581cf73f30ae8d8ec53ab401704d8a9fbf2b8314a9", kill_on_drop: false }` [INFO] [stdout] f6b8f88bdcd1deb770a830581cf73f30ae8d8ec53ab401704d8a9fbf2b8314a9 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:90999bfc7ae267e83380e433d8e61a7c072ca6729e92edbae886d3423b3a6f4c" "/opt/rustwide/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "test" "--frozen" "--no-run" "--message-format=json" "--target" "x86_64-unknown-linux-musl", kill_on_drop: false }` [INFO] [stdout] 91313fd944fb73e5335bad52e88cc5261b889f5936826e6318778d799ee94716 [INFO] running `Command { std: "docker" "start" "-a" "91313fd944fb73e5335bad52e88cc5261b889f5936826e6318778d799ee94716", kill_on_drop: false }` [INFO] [stderr] Compiling regex-syntax v0.8.5 [INFO] [stderr] Compiling log v0.4.27 [INFO] [stderr] Compiling jiff v0.2.9 [INFO] [stderr] Compiling glob v0.3.2 [INFO] [stderr] Compiling bencher v0.1.5 [INFO] [stderr] Compiling aho-corasick v1.1.3 [INFO] [stderr] Compiling anstream v0.6.18 [INFO] [stderr] Compiling gb-io v0.9.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: lifetime flowing from input to output with different syntax can be confusing [INFO] [stdout] --> src/seq.rs:663:30 [INFO] [stdout] | [INFO] [stdout] 663 | pub fn extract_range_seq(&self, start: i64, end: i64) -> Cow<[u8]> { [INFO] [stdout] | ^^^^^ --------- the lifetime gets resolved as `'_` [INFO] [stdout] | | [INFO] [stdout] | this lifetime flows to the output [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default [INFO] [stdout] help: one option is to remove the lifetime for references and use the anonymous lifetime for paths [INFO] [stdout] | [INFO] [stdout] 663 | pub fn extract_range_seq(&self, start: i64, end: i64) -> Cow<'_, [u8]> { [INFO] [stdout] | +++ [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Compiling regex-automata v0.4.9 [INFO] [stderr] Compiling regex v1.11.1 [INFO] [stderr] Compiling env_filter v0.1.3 [INFO] [stderr] Compiling env_logger v0.11.8 [INFO] [stdout] error: couldn't read `src/../tests/mg1655.gb`: No such file or directory (os error 2) [INFO] [stdout] --> src/lib.rs:67:21 [INFO] [stdout] | [INFO] [stdout] 67 | let ecoli = include_bytes!("../tests/mg1655.gb"); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: couldn't read `src/../tests/circ.gb`: No such file or directory (os error 2) [INFO] [stdout] --> src/lib.rs:83:32 [INFO] [stdout] | [INFO] [stdout] 83 | let circ = parse_slice(include_bytes!("../tests/circ.gb")).unwrap(); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: couldn't read `src/../tests/circ.gb`: No such file or directory (os error 2) [INFO] [stdout] --> src/lib.rs:90:32 [INFO] [stdout] | [INFO] [stdout] 90 | let circ = parse_slice(include_bytes!("../tests/circ.gb")).unwrap().pop().unwrap(); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: couldn't read `src/../tests/biopython_tests/ls_orchid.gb`: No such file or directory (os error 2) [INFO] [stdout] --> src/lib.rs:109:25 [INFO] [stdout] | [INFO] [stdout] 109 | parse_slice(include_bytes!("../tests/biopython_tests/ls_orchid.gb")).unwrap(); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] error: could not compile `gb-io` (lib test) due to 4 previous errors [INFO] running `Command { std: "docker" "inspect" "91313fd944fb73e5335bad52e88cc5261b889f5936826e6318778d799ee94716", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "91313fd944fb73e5335bad52e88cc5261b889f5936826e6318778d799ee94716", kill_on_drop: false }` [INFO] [stdout] 91313fd944fb73e5335bad52e88cc5261b889f5936826e6318778d799ee94716