[INFO] fetching crate rsabpoa 0.3.7... [INFO] testing rsabpoa-0.3.7 against try#8de4c7234dd9b97c9d76b58671343fdbbc9a433e+target=x86_64-unknown-linux-musl for musl_upgrade_1_2_5_with_getrandom_patch_0 [INFO] extracting crate rsabpoa 0.3.7 into /workspace/builds/worker-2-tc1/source [INFO] started tweaking crates.io crate rsabpoa 0.3.7 [INFO] finished tweaking crates.io crate rsabpoa 0.3.7 [INFO] tweaked toml for crates.io crate rsabpoa 0.3.7 written to /workspace/builds/worker-2-tc1/source/Cargo.toml [INFO] validating manifest of crates.io crate rsabpoa 0.3.7 on toolchain 8de4c7234dd9b97c9d76b58671343fdbbc9a433e [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate rsabpoa 0.3.7 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded linear-map v1.2.0 [INFO] [stderr] Downloaded bio-types v1.0.4 [INFO] [stderr] Downloaded fs-utils v1.1.4 [INFO] [stderr] Downloaded gskits v0.13.2 [INFO] [stderr] Downloaded zerocopy-derive v0.8.22 [INFO] [stderr] Downloaded statrs v0.18.0 [INFO] [stderr] Downloaded rust-htslib v0.49.0 [INFO] [stderr] Downloaded bio v2.2.0 [INFO] [stderr] Downloaded zerocopy v0.8.22 [INFO] [stderr] Downloaded hts-sys v2.2.0 [INFO] [stderr] Downloaded openssl-src v300.4.2+3.4.1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:90999bfc7ae267e83380e433d8e61a7c072ca6729e92edbae886d3423b3a6f4c" "/opt/rustwide/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 767cff8a44634780aa06ddcc3564fca1bdfb9cd7306044efe0106f5668db2346 [INFO] running `Command { std: "docker" "start" "-a" "767cff8a44634780aa06ddcc3564fca1bdfb9cd7306044efe0106f5668db2346", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "767cff8a44634780aa06ddcc3564fca1bdfb9cd7306044efe0106f5668db2346", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "767cff8a44634780aa06ddcc3564fca1bdfb9cd7306044efe0106f5668db2346", kill_on_drop: false }` [INFO] [stdout] 767cff8a44634780aa06ddcc3564fca1bdfb9cd7306044efe0106f5668db2346 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:90999bfc7ae267e83380e433d8e61a7c072ca6729e92edbae886d3423b3a6f4c" "/opt/rustwide/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "build" "--frozen" "--message-format=json" "--target" "x86_64-unknown-linux-musl", kill_on_drop: false }` [INFO] [stdout] ecc1ee00f84fc82a6d16693e2bb63cd4f3c7780849c09f1bc0d2205177d99326 [INFO] running `Command { std: "docker" "start" "-a" "ecc1ee00f84fc82a6d16693e2bb63cd4f3c7780849c09f1bc0d2205177d99326", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.94 [INFO] [stderr] Compiling libc v0.2.170 [INFO] [stderr] Compiling autocfg v1.4.0 [INFO] [stderr] Compiling pkg-config v0.3.32 [INFO] [stderr] Compiling libm v0.2.11 [INFO] [stderr] Compiling stable_deref_trait v1.2.0 [INFO] [stderr] Compiling vcpkg v0.2.15 [INFO] [stderr] Compiling glob v0.3.2 [INFO] [stderr] Compiling writeable v0.5.5 [INFO] [stderr] Compiling litemap v0.7.5 [INFO] [stderr] Compiling quote v1.0.39 [INFO] [stderr] Compiling num-traits v0.2.19 [INFO] [stderr] Compiling clang-sys v1.8.1 [INFO] [stderr] Compiling syn v2.0.99 [INFO] [stderr] Compiling memchr 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rust-htslib v0.49.0 [INFO] [stderr] Compiling gskits v0.13.2 [INFO] [stdout] warning: type `__off_t` should have an upper camel case name [INFO] [stdout] --> src/abpoa_sys.rs:83:10 [INFO] [stdout] | [INFO] [stdout] 83 | pub type __off_t = ::std::os::raw::c_long; [INFO] [stdout] | ^^^^^^^ help: convert the identifier to upper camel case: `OffT` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_camel_case_types)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: type `__off64_t` should have an upper camel case name [INFO] [stdout] --> src/abpoa_sys.rs:84:10 [INFO] [stdout] | [INFO] [stdout] 84 | pub type __off64_t = ::std::os::raw::c_long; [INFO] [stdout] | ^^^^^^^^^ help: convert the identifier to upper camel case: `Off64T` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: type `__m128i` should have an upper camel case name [INFO] [stdout] --> src/abpoa_sys.rs:85:10 [INFO] [stdout] | [INFO] [stdout] 85 | pub type __m128i = [::std::os::raw::c_longlong; 2usize]; [INFO] [stdout] | ^^^^^^^ help: convert the identifier to upper camel case: `M128i` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: type `_IO_lock_t` should have an upper camel case name [INFO] [stdout] --> src/abpoa_sys.rs:102:10 [INFO] [stdout] | [INFO] [stdout] 102 | pub type _IO_lock_t = ::std::os::raw::c_void; [INFO] [stdout] | ^^^^^^^^^^ help: convert the identifier to upper camel case: `IoLockT` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `abpoa_msa1` [INFO] [stdout] --> src/abpoa.rs:7:81 [INFO] [stdout] | [INFO] [stdout] 7 | abpoa_generate_consensus, abpoa_generate_rc_msa, abpoa_init, abpoa_msa, abpoa_msa1, [INFO] [stdout] | ^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: structure field `_IO_read_ptr` should have a snake case name [INFO] [stdout] --> src/abpoa_sys.rs:107:9 [INFO] [stdout] | [INFO] [stdout] 107 | pub _IO_read_ptr: *mut ::std::os::raw::c_char, [INFO] [stdout] | ^^^^^^^^^^^^ help: convert the identifier to snake case (notice the capitalization): `_io_read_ptr` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_snake_case)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: structure field `_IO_read_end` should have a snake case name [INFO] [stdout] --> src/abpoa_sys.rs:108:9 [INFO] [stdout] | [INFO] [stdout] 108 | pub _IO_read_end: *mut ::std::os::raw::c_char, [INFO] [stdout] | ^^^^^^^^^^^^ help: convert the identifier to snake case (notice the capitalization): `_io_read_end` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: structure field `_IO_read_base` should have a snake case name [INFO] [stdout] --> src/abpoa_sys.rs:109:9 [INFO] [stdout] | [INFO] [stdout] 109 | pub _IO_read_base: *mut ::std::os::raw::c_char, [INFO] [stdout] | ^^^^^^^^^^^^^ help: convert the identifier to snake case (notice the capitalization): `_io_read_base` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: structure field `_IO_write_base` should have a snake case name [INFO] [stdout] --> src/abpoa_sys.rs:110:9 [INFO] [stdout] | [INFO] [stdout] 110 | pub _IO_write_base: *mut ::std::os::raw::c_char, [INFO] [stdout] | ^^^^^^^^^^^^^^ help: convert the identifier to snake case (notice the capitalization): `_io_write_base` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: structure field `_IO_write_ptr` should have a snake case name [INFO] [stdout] --> src/abpoa_sys.rs:111:9 [INFO] [stdout] | [INFO] [stdout] 111 | pub _IO_write_ptr: *mut ::std::os::raw::c_char, [INFO] [stdout] | ^^^^^^^^^^^^^ help: convert the identifier to snake case (notice the capitalization): `_io_write_ptr` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: structure field `_IO_write_end` should have a snake case name [INFO] [stdout] --> src/abpoa_sys.rs:112:9 [INFO] [stdout] | [INFO] [stdout] 112 | pub _IO_write_end: *mut ::std::os::raw::c_char, [INFO] [stdout] | ^^^^^^^^^^^^^ help: convert the identifier to snake case (notice the capitalization): `_io_write_end` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: structure field `_IO_buf_base` should have a snake case name [INFO] [stdout] --> src/abpoa_sys.rs:113:9 [INFO] [stdout] | [INFO] [stdout] 113 | pub _IO_buf_base: *mut ::std::os::raw::c_char, [INFO] [stdout] | ^^^^^^^^^^^^ help: convert the identifier to snake case (notice the capitalization): `_io_buf_base` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: structure field `_IO_buf_end` should have a snake case name [INFO] [stdout] --> src/abpoa_sys.rs:114:9 [INFO] [stdout] | [INFO] [stdout] 114 | pub _IO_buf_end: *mut ::std::os::raw::c_char, [INFO] [stdout] | ^^^^^^^^^^^ help: convert the identifier to snake case (notice the capitalization): `_io_buf_end` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: structure field `_IO_save_base` should have a snake case name [INFO] [stdout] --> src/abpoa_sys.rs:115:9 [INFO] [stdout] | [INFO] [stdout] 115 | pub _IO_save_base: *mut ::std::os::raw::c_char, [INFO] [stdout] | ^^^^^^^^^^^^^ help: convert the identifier to snake case (notice the capitalization): `_io_save_base` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: structure field `_IO_backup_base` should have a snake case name [INFO] [stdout] --> src/abpoa_sys.rs:116:9 [INFO] [stdout] | [INFO] [stdout] 116 | pub _IO_backup_base: *mut ::std::os::raw::c_char, [INFO] [stdout] | ^^^^^^^^^^^^^^^ help: convert the identifier to snake case (notice the capitalization): `_io_backup_base` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: structure field `_IO_save_end` should have a snake case name [INFO] [stdout] --> src/abpoa_sys.rs:117:9 [INFO] [stdout] | [INFO] [stdout] 117 | pub _IO_save_end: *mut ::std::os::raw::c_char, [INFO] [stdout] | ^^^^^^^^^^^^ help: convert the identifier to snake case (notice the capitalization): `_io_save_end` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `abpoa_consensus_dna`, `abpoa_free_para`, and `msa_with_adaptive_fwd_rev` [INFO] [stdout] --> src/bin/abpoa_consensus.rs:17:13 [INFO] [stdout] | [INFO] [stdout] 17 | abpoa::{abpoa_consensus_dna, abpoa_consensus_dna_core, msa_with_adaptive_fwd_rev, AbpoaParam}, [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ ^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] 18 | abpoa_sys::{abpoa_free, abpoa_free_para, abpoa_init, abpoa_para_t, abpoa_t}, [INFO] [stdout] | ^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: linking with `cc` failed: exit status: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-m64" "/lib/rustlib/x86_64-unknown-linux-musl/lib/self-contained/rcrt1.o" "/lib/rustlib/x86_64-unknown-linux-musl/lib/self-contained/crti.o" "/lib/rustlib/x86_64-unknown-linux-musl/lib/self-contained/crtbeginS.o" "/tmp/rustcTMs49m/symbols.o" "<17 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/{librsabpoa-38ce5b59758c3f80.rlib}.rlib" "-lm" "-lz" "-lpthread" "/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/{libgskits-91a952d5c1d7cc8f.rlib,libnum_cpus-92297d31d3df940c.rlib,libuuid-9e1456106dd2be3d.rlib,libsha1_smol-8d61172f49b79e40.rlib,libchrono-934f2cb2ef5ffaea.rlib,libiana_time_zone-a5d0036731b739f1.rlib,libindicatif-704a9275e3ea081e.rlib,libportable_atomic-d84a5498a775df9f.rlib,libnumber_prefix-c52a145dab539939.rlib,libconsole-7df76e1fb59fe079.rlib,libunicode_width-c4050f9e9a6c1676.rlib,libonce_cell-303ff80ee814d981.rlib,libbio-62f32bf150fb5cd8.rlib,libstrum-4454d5b04e1fc0de.rlib,libcsv-cf8e9e46523759d1.rlib,libryu-0a228f54b75663b5.rlib,libitoa-ffb801c715a80a64.rlib,libcsv_core-ac180dbc487c99fc.rlib,libbytecount-5d766aa325432f77.rlib,libtriple_accel-ff6a1dd1c2dff349.rlib,libeditdistancek-a355521d9d6840ca.rlib,libitertools_num-53dab8b17c5d7b2e.rlib,libenum_map-402b70d042976c3b.rlib,libstatrs-2dda95e21c955c8a.rlib,libnalgebra-a4ad20613f872cfa.rlib,librand_distr-83f6eb9447a98625.rlib,libnum_rational-6c1aa5a25185eba5.rlib,libtypenum-946f014670f06d4a.rlib,libsimba-be70ea908a713e79.rlib,libwide-2721a58b9e53b532.rlib,libsafe_arch-0851affc7abce7e8.rlib,libbytemuck-189d88e106abf98d.rlib,librand-4518526627a43c41.rlib,librand_chacha-171b240a86b58ad6.rlib,libppv_lite86-20c46fc109afbb9e.rlib,libzerocopy-aa3322eb64c8e536.rlib,librand_core-f4a02ad3a13d341a.rlib,libgetrandom-c784fe861a0529aa.rlib,libcfg_if-66d55f6b302e88c8.rlib,libordered_float-6bc66eb845b2ad8f.rlib,libndarray-ed8226c331a27138.rlib,libmatrixmultiply-bf4776044f47fab3.rlib,libnum_complex-bc07486650d49dce.rlib,librawpointer-ee8696fe85e6dce4.rlib,libmultimap-e07a2780a5c6acea.rlib,libitertools-a65fd7d552c2c02a.rlib,libeither-da399c10ae937dac.rlib,libanyhow-e15d47c38af62097.rlib,libnum_integer-59f1420c05b1ef12.rlib,libbv-9c5c02b09e921b95.rlib,libvec_map-d403721a67a5310e.rlib,libserde-98dc64fc9f31591f.rlib,libbit_set-d4b3f83adb550185.rlib,libbit_vec-24e62de04a15161e.rlib,libfxhash-c493f72d80a22016.rlib,libpetgraph-4f5e233129b1c045.rlib,libindexmap-15c056e598030d53.rlib,libequivalent-c8ca4e154c540f6d.rlib,libhashbrown-888db2db3bd93af1.rlib,libfixedbitset-b472f93768bbe449.rlib,libapprox-4cd83458522a0ae6.rlib,libnum_traits-2f3520ff559f541e.rlib,librust_htslib-4633b1a10247001c.rlib,libthiserror-f9a4893d62cf7108.rlib,libieee754-8632c207f9ca9a20.rlib,libhts_sys-219fceb991a8ad14.rlib,liblzma_sys-4f011b25740c6b62.rlib,libcurl_sys-73b402469a83224e.rlib,libopenssl_sys-c98990e33695153b.rlib,liblibz_sys-c973e5af2c258c4b.rlib,liblibc-de1c4bcb341abc44.rlib,libbzip2_sys-05f6e6413b09e0b9.rlib,liburl-ef16d65833276608.rlib,libidna-8936dad545294ddd.rlib,libidna_adapter-bebc13d3dcb680a8.rlib,libicu_normalizer-4e7803dc1fe98f59.rlib,libicu_normalizer_data-6be18fdd2cdcc3ce.rlib,libwrite16-eb994bf2b67b3da0.rlib,libutf8_iter-91f65759b740ff04.rlib,libutf16_iter-a8fc27517c0671e6.rlib,libsmallvec-7a27ed33457aa2e4.rlib,libicu_properties-3b78b6e6d022ba35.rlib,libicu_properties_data-14e9ef912c5ec453.rlib,libicu_locid_transform-7263d91cbbce352b.rlib,libicu_locid_transform_data-e2ac0a579ab5777d.rlib,libicu_collections-138e62529092bd4a.rlib,libicu_provider-e0587847779e15d5.rlib,libicu_locid-3c865a26809dd4ad.rlib,liblitemap-3a36c701b3981316.rlib,libtinystr-5b1f14ba2b5a4abe.rlib,libzerovec-ba0768be3c2e18d6.rlib,libwriteable-8bdc454eba7bdfb6.rlib,libyoke-f1a8478a14f38dd2.rlib,libzerofrom-db9a2889e5722ee7.rlib,libstable_deref_trait-bd927906e69329b4.rlib,libform_urlencoded-16b79aea961b1f52.rlib,libpercent_encoding-41fcfc968ac39f44.rlib,libbio_types-e80e82744cb542de.rlib,libthiserror-64119fbcef25349d.rlib,libbyteorder-1e24148c060ae1e7.rlib,libregex-89d730340934734a.rlib,libregex_automata-f1455b20f0e1ba41.rlib,libaho_corasick-221b7966ebefc064.rlib,libmemchr-a6af4e08ecbb6708.rlib,libregex_syntax-68ebd4ae9920c658.rlib,liblinear_map-3cadc16fd97c7847.rlib,liblazy_static-f3dc5c13b01a78ba.rlib,libnewtype_derive-f91eed88f8acaf26.rlib,libcustom_derive-d11a0801595e3fc6.rlib,libcrossbeam-9ca40331ee959400.rlib,libcrossbeam_deque-119079381ef52cfe.rlib,libcrossbeam_channel-ca6581bbb5d92bb2.rlib,libcrossbeam_queue-20607bf278a51a7f.rlib,libcrossbeam_epoch-b6388c017fb3a6af.rlib,libcrossbeam_utils-3e8757fdca4554a3.rlib,libclap-d963ce696e4eab11.rlib,libclap_builder-d52442a55ad3c1d3.rlib,libstrsim-e5a1ceb0bdbece3f.rlib,libanstream-527927351f6d80a2.rlib,libanstyle_query-ebe1135144359f1f.rlib,libis_terminal_polyfill-67333c1fd864e7ce.rlib,libcolorchoice-aaa33b9b4c6e047f.rlib,libanstyle_parse-5c3251d51efe2012.rlib,libutf8parse-566e819dd32c0a03.rlib,libclap_lex-b04abc9e061f964d.rlib,libanstyle-b75f78861eab6f9d.rlib}.rlib" "/lib/rustlib/x86_64-unknown-linux-musl/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*}.rlib" "-lunwind" "/lib/rustlib/x86_64-unknown-linux-musl/lib/{libcfg_if-*,liblibc-*}.rlib" "-lc" "/lib/rustlib/x86_64-unknown-linux-musl/lib/{librustc_std_workspace_core-*,liballoc-*,libcore-*,libcompiler_builtins-*}.rlib" "-L" "/tmp/rustcTMs49m/raw-dylibs" "-Wl,-Bdynamic" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-nostartfiles" "-L" "/opt/rustwide/target/x86_64-unknown-linux-musl/debug/build/rsabpoa-288d1b79ddcb99b1/out/abPOA-v1.5.3/lib" "-L" "/opt/rustwide/target/x86_64-unknown-linux-musl/debug/build/hts-sys-733bb96eeec18673/out" "-L" "/opt/rustwide/target/x86_64-unknown-linux-musl/debug/build/bzip2-sys-b19fbac00f3396c9/out/lib" "-L" "/opt/rustwide/target/x86_64-unknown-linux-musl/debug/build/curl-sys-5ba01c9e7f36c1ff/out/build" "-L" "/opt/rustwide/target/x86_64-unknown-linux-musl/debug/build/libz-sys-821373a40330f0f5/out/lib" "-L" "/opt/rustwide/target/x86_64-unknown-linux-musl/debug/build/libz-sys-821373a40330f0f5/out/lib" "-L" "/opt/rustwide/target/x86_64-unknown-linux-musl/debug/build/openssl-sys-7e4aa907f48116c5/out/openssl-build/install/lib" "-L" "/opt/rustwide/target/x86_64-unknown-linux-musl/debug/build/lzma-sys-edb0bcc75925c054/out" "-L" "/lib/rustlib/x86_64-unknown-linux-musl/lib/self-contained" "-L" "/lib/rustlib/x86_64-unknown-linux-musl/lib" "-o" "/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/abpoa_consensus-010ec27171535b4e" "-Wl,--gc-sections" "-static-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs" "/lib/rustlib/x86_64-unknown-linux-musl/lib/self-contained/crtendS.o" "/lib/rustlib/x86_64-unknown-linux-musl/lib/self-contained/crtn.o" [INFO] [stdout] = note: some arguments are omitted. use `--verbose` to show all linker arguments [INFO] [stdout] = note: /usr/bin/ld: /usr/lib/x86_64-linux-gnu/libm-2.39.a(e_log.o): warning: relocation against `_dl_x86_cpu_features' in read-only section `.text' [INFO] [stdout] /usr/bin/ld: /opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/librsabpoa-38ce5b59758c3f80.rlib(abpoa_align.o): in function `fprintf': [INFO] [stdout] /usr/include/x86_64-linux-gnu/bits/stdio2.h:79:(.text+0xc80): undefined reference to `__fprintf_chk' [INFO] [stdout] /usr/bin/ld: /usr/include/x86_64-linux-gnu/bits/stdio2.h:79:(.text+0xdef): undefined reference to `__fprintf_chk' [INFO] [stdout] /usr/bin/ld: /usr/include/x86_64-linux-gnu/bits/stdio2.h:79:(.text+0x1231): undefined reference to `__fprintf_chk' [INFO] [stdout] /usr/bin/ld: /usr/include/x86_64-linux-gnu/bits/stdio2.h:79:(.text+0x1daf): undefined reference to `__fprintf_chk' [INFO] [stdout] /usr/bin/ld: /opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/librsabpoa-38ce5b59758c3f80.rlib(abpoa_plot.o): in function `strcpy': [INFO] [stdout] /usr/include/x86_64-linux-gnu/bits/string_fortified.h:79:(.text+0x15e): undefined reference to `__memcpy_chk' [INFO] [stdout] /usr/bin/ld: /opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/librsabpoa-38ce5b59758c3f80.rlib(abpoa_plot.o): in function `strcat': [INFO] [stdout] /usr/include/x86_64-linux-gnu/bits/string_fortified.h:130:(.text+0x172): undefined reference to `__strcat_chk' [INFO] [stdout] /usr/bin/ld: /opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/librsabpoa-38ce5b59758c3f80.rlib(abpoa_plot.o): in function `fprintf': [INFO] [stdout] /usr/include/x86_64-linux-gnu/bits/stdio2.h:79:(.text+0x1b5): undefined reference to `__fprintf_chk' [INFO] [stdout] /usr/bin/ld: /usr/include/x86_64-linux-gnu/bits/stdio2.h:79:(.text+0x1f8): undefined reference to `__fprintf_chk' [INFO] [stdout] /usr/bin/ld: /opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/librsabpoa-38ce5b59758c3f80.rlib(abpoa_plot.o): in function `sprintf': [INFO] [stdout] /usr/include/x86_64-linux-gnu/bits/stdio2.h:30:(.text+0x26d): undefined reference to `__sprintf_chk' [INFO] [stdout] /usr/bin/ld: /opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/librsabpoa-38ce5b59758c3f80.rlib(abpoa_plot.o): in function `fprintf': [INFO] [stdout] /usr/include/x86_64-linux-gnu/bits/stdio2.h:79:(.text+0x2a5): undefined reference to `__fprintf_chk' [INFO] [stdout] /usr/bin/ld: /opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/librsabpoa-38ce5b59758c3f80.rlib(abpoa_plot.o): in function `sprintf': [INFO] [stdout] /usr/include/x86_64-linux-gnu/bits/stdio2.h:30:(.text+0x2e5): undefined reference to `__sprintf_chk' [INFO] [stdout] /usr/bin/ld: /usr/include/x86_64-linux-gnu/bits/stdio2.h:30:(.text+0x323): undefined reference to `__sprintf_chk' [INFO] [stdout] /usr/bin/ld: /opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/librsabpoa-38ce5b59758c3f80.rlib(abpoa_plot.o): in function `fprintf': [INFO] [stdout] /usr/include/x86_64-linux-gnu/bits/stdio2.h:79:(.text+0x3c6): undefined reference to `__fprintf_chk' [INFO] [stdout] /usr/bin/ld: /opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/librsabpoa-38ce5b59758c3f80.rlib(abpoa_plot.o): in function `sprintf': [INFO] [stdout] /usr/include/x86_64-linux-gnu/bits/stdio2.h:30:(.text+0x4bf): undefined reference to `__sprintf_chk' [INFO] [stdout] /usr/bin/ld: /opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/librsabpoa-38ce5b59758c3f80.rlib(abpoa_plot.o): in function `fprintf': [INFO] [stdout] /usr/include/x86_64-linux-gnu/bits/stdio2.h:79:(.text+0x531): undefined reference to `__fprintf_chk' [INFO] [stdout] /usr/bin/ld: /usr/include/x86_64-linux-gnu/bits/stdio2.h:79:(.text+0x572): undefined reference to `__fprintf_chk' [INFO] [stdout] /usr/bin/ld: /usr/include/x86_64-linux-gnu/bits/stdio2.h:79:(.text+0x5d3): undefined reference to `__fprintf_chk' [INFO] [stdout] /usr/bin/ld: /usr/include/x86_64-linux-gnu/bits/stdio2.h:79:(.text+0x62f): undefined reference to `__fprintf_chk' [INFO] [stdout] /usr/bin/ld: /opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/librsabpoa-38ce5b59758c3f80.rlib(abpoa_seed.o): in function `fprintf': [INFO] [stdout] /usr/include/x86_64-linux-gnu/bits/stdio2.h:79:(.text+0x24bf): undefined reference to `__fprintf_chk' [INFO] [stdout] /usr/bin/ld: /opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/librsabpoa-38ce5b59758c3f80.rlib(abpoa_seed.o):/usr/include/x86_64-linux-gnu/bits/stdio2.h:79: more undefined references to `__fprintf_chk' follow [INFO] [stdout] /usr/bin/ld: /opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/librsabpoa-38ce5b59758c3f80.rlib(utils.o): in function `vfprintf': [INFO] [stdout] /usr/include/x86_64-linux-gnu/bits/stdio2.h:109:(.text+0x724): undefined reference to `__vfprintf_chk' [INFO] [stdout] /usr/bin/ld: /opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/librsabpoa-38ce5b59758c3f80.rlib(utils.o): in function `fprintf': [INFO] [stdout] /usr/include/x86_64-linux-gnu/bits/stdio2.h:79:(.text+0x991): undefined reference to `__fprintf_chk' [INFO] [stdout] /usr/bin/ld: /opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/librsabpoa-38ce5b59758c3f80.rlib(utils.o): in function `vfprintf': [INFO] [stdout] /usr/include/x86_64-linux-gnu/bits/stdio2.h:109:(.text+0x9a4): undefined reference to `__vfprintf_chk' [INFO] [stdout] /usr/bin/ld: /opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/librsabpoa-38ce5b59758c3f80.rlib(utils.o): in function `fprintf': [INFO] [stdout] /usr/include/x86_64-linux-gnu/bits/stdio2.h:79:(.text+0x9f9): undefined reference to `__fprintf_chk' [INFO] [stdout] /usr/bin/ld: /usr/include/x86_64-linux-gnu/bits/stdio2.h:79:(.text+0xa39): undefined reference to `__fprintf_chk' [INFO] [stdout] /usr/bin/ld: /usr/include/x86_64-linux-gnu/bits/stdio2.h:79:(.text+0x149a): undefined reference to `__fprintf_chk' [INFO] [stdout] /usr/bin/ld: /opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/librsabpoa-38ce5b59758c3f80.rlib(utils.o): in function `vfprintf': [INFO] [stdout] /usr/include/x86_64-linux-gnu/bits/stdio2.h:109:(.text+0x14d4): undefined reference to `__vfprintf_chk' [INFO] [stdout] /usr/bin/ld: /usr/include/x86_64-linux-gnu/bits/stdio2.h:109:(.text+0x15df): undefined reference to `__vfprintf_chk' [INFO] [stdout] /usr/bin/ld: /usr/include/x86_64-linux-gnu/bits/stdio2.h:109:(.text+0x16df): undefined reference to `__vfprintf_chk' [INFO] [stdout] /usr/bin/ld: /usr/include/x86_64-linux-gnu/bits/stdio2.h:109:(.text+0x17cd): undefined reference to `__vfprintf_chk' [INFO] [stdout] /usr/bin/ld: /opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/librsabpoa-38ce5b59758c3f80.rlib(utils.o): in function `fprintf': [INFO] [stdout] /usr/include/x86_64-linux-gnu/bits/stdio2.h:79:(.text+0x1e53): undefined reference to `__fprintf_chk' [INFO] [stdout] /usr/bin/ld: /usr/include/x86_64-linux-gnu/bits/stdio2.h:79:(.text+0x1f18): undefined reference to `__fprintf_chk' [INFO] [stdout] /usr/bin/ld: /opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/librsabpoa-38ce5b59758c3f80.rlib(utils.o): in function `vfprintf': [INFO] [stdout] /usr/include/x86_64-linux-gnu/bits/stdio2.h:109:(.text+0x1f51): undefined reference to `__vfprintf_chk' [INFO] [stdout] /usr/bin/ld: /usr/lib/x86_64-linux-gnu/libm-2.39.a(w_log10.o): in function `__log10': [INFO] [stdout] (.text+0x1f): undefined reference to `errno' [INFO] [stdout] /usr/bin/ld: /usr/lib/x86_64-linux-gnu/libm-2.39.a(w_pow.o): in function `__pow': [INFO] [stdout] (.text+0x7a): undefined reference to `errno' [INFO] [stdout] /usr/bin/ld: (.text+0xb8): undefined reference to `errno' [INFO] [stdout] /usr/bin/ld: /usr/lib/x86_64-linux-gnu/libm-2.39.a(e_pow.o): in function `__ieee754_pow_ifunc': [INFO] [stdout] (.text+0x7a6): undefined reference to `_dl_x86_cpu_features' [INFO] [stdout] /usr/bin/ld: (.text+0x7af): undefined reference to `_dl_x86_cpu_features' [INFO] [stdout] /usr/bin/ld: (.text+0x7b8): undefined reference to `_dl_x86_cpu_features' [INFO] [stdout] /usr/bin/ld: /usr/lib/x86_64-linux-gnu/libm-2.39.a(math_err.o): in function `with_errno': [INFO] [stdout] (.text+0x3): undefined reference to `errno' [INFO] [stdout] /usr/bin/ld: /usr/lib/x86_64-linux-gnu/libm-2.39.a(math_err.o): in function `with_errno.constprop.0': [INFO] [stdout] (.text+0x13): undefined reference to `errno' [INFO] [stdout] /usr/bin/ld: /usr/lib/x86_64-linux-gnu/libm-2.39.a(e_log.o): in function `__ieee754_log_ifunc': [INFO] [stdout] (.text+0x2c6): undefined reference to `_dl_x86_cpu_features' [INFO] [stdout] /usr/bin/ld: (.text+0x2d1): undefined reference to `_dl_x86_cpu_features' [INFO] [stdout] /usr/bin/ld: (.text+0x2da): undefined reference to `_dl_x86_cpu_features' [INFO] [stdout] /usr/bin/ld: read-only segment has dynamic relocations [INFO] [stdout] collect2: error: ld returned 1 exit status [INFO] [stdout] [INFO] [stdout] = note: some `extern` functions couldn't be found; some native libraries may need to be installed or have their path specified [INFO] [stdout] = note: use the `-l` flag to specify native libraries to link [INFO] [stdout] = note: use the `cargo:rustc-link-lib` directive to specify the native libraries to link with Cargo (see https://doc.rust-lang.org/cargo/reference/build-scripts.html#rustc-link-lib) [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] error: could not compile `rsabpoa` (bin "abpoa_consensus") due to 1 previous error; 1 warning emitted [INFO] running `Command { std: "docker" "inspect" "ecc1ee00f84fc82a6d16693e2bb63cd4f3c7780849c09f1bc0d2205177d99326", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "ecc1ee00f84fc82a6d16693e2bb63cd4f3c7780849c09f1bc0d2205177d99326", kill_on_drop: false }` [INFO] [stdout] ecc1ee00f84fc82a6d16693e2bb63cd4f3c7780849c09f1bc0d2205177d99326