[INFO] fetching crate checkm 0.3.0... [INFO] testing checkm-0.3.0 against try#8de4c7234dd9b97c9d76b58671343fdbbc9a433e+target=x86_64-unknown-linux-musl for musl_upgrade_1_2_5_with_getrandom_patch_0 [INFO] extracting crate checkm 0.3.0 into /workspace/builds/worker-5-tc1/source [INFO] started tweaking crates.io crate checkm 0.3.0 [INFO] finished tweaking crates.io crate checkm 0.3.0 [INFO] tweaked toml for crates.io crate checkm 0.3.0 written to /workspace/builds/worker-5-tc1/source/Cargo.toml [INFO] validating manifest of crates.io crate checkm 0.3.0 on toolchain 8de4c7234dd9b97c9d76b58671343fdbbc9a433e [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Locking 34 packages to latest compatible versions [INFO] [stderr] Adding env_logger v0.10.2 (available: v0.11.8) [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded cargo-husky v1.5.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:90999bfc7ae267e83380e433d8e61a7c072ca6729e92edbae886d3423b3a6f4c" "/opt/rustwide/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 694ad5d7ac272bea3d572b7e89253bc52ed188743e886bc26e196802e427ce1f [INFO] running `Command { std: "docker" "start" "-a" "694ad5d7ac272bea3d572b7e89253bc52ed188743e886bc26e196802e427ce1f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "694ad5d7ac272bea3d572b7e89253bc52ed188743e886bc26e196802e427ce1f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "694ad5d7ac272bea3d572b7e89253bc52ed188743e886bc26e196802e427ce1f", kill_on_drop: false }` [INFO] [stdout] 694ad5d7ac272bea3d572b7e89253bc52ed188743e886bc26e196802e427ce1f [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:90999bfc7ae267e83380e433d8e61a7c072ca6729e92edbae886d3423b3a6f4c" "/opt/rustwide/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "build" "--frozen" "--message-format=json" "--target" "x86_64-unknown-linux-musl", kill_on_drop: false }` [INFO] [stdout] e3c5e255e86becf4d3205886cb44dbf767cd028b6e72f0a964fb47b4cbf3e144 [INFO] running `Command { std: "docker" "start" "-a" "e3c5e255e86becf4d3205886cb44dbf767cd028b6e72f0a964fb47b4cbf3e144", kill_on_drop: false }` [INFO] [stderr] Compiling regex-syntax v0.8.5 [INFO] [stderr] Compiling csv-core v0.1.12 [INFO] [stderr] Compiling humantime v2.2.0 [INFO] [stderr] Compiling is-terminal v0.4.16 [INFO] [stderr] Compiling csv v1.3.1 [INFO] [stderr] Compiling regex-automata v0.4.9 [INFO] [stderr] Compiling regex v1.11.1 [INFO] [stderr] Compiling env_logger v0.10.2 [INFO] [stderr] Compiling checkm v0.3.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 6.48s [INFO] running `Command { std: "docker" "inspect" "e3c5e255e86becf4d3205886cb44dbf767cd028b6e72f0a964fb47b4cbf3e144", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "e3c5e255e86becf4d3205886cb44dbf767cd028b6e72f0a964fb47b4cbf3e144", kill_on_drop: false }` [INFO] [stdout] e3c5e255e86becf4d3205886cb44dbf767cd028b6e72f0a964fb47b4cbf3e144 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:90999bfc7ae267e83380e433d8e61a7c072ca6729e92edbae886d3423b3a6f4c" "/opt/rustwide/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "test" "--frozen" "--no-run" "--message-format=json" "--target" "x86_64-unknown-linux-musl", kill_on_drop: false }` [INFO] [stdout] f2e9046a47774f081cb81be1a493edf48bb59c4239a7b25d7482493043b0fbf9 [INFO] running `Command { std: "docker" "start" "-a" "f2e9046a47774f081cb81be1a493edf48bb59c4239a7b25d7482493043b0fbf9", kill_on_drop: false }` [INFO] [stderr] Compiling cargo-husky v1.5.0 [INFO] [stderr] Compiling checkm v0.3.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 2.57s [INFO] running `Command { std: "docker" "inspect" "f2e9046a47774f081cb81be1a493edf48bb59c4239a7b25d7482493043b0fbf9", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "f2e9046a47774f081cb81be1a493edf48bb59c4239a7b25d7482493043b0fbf9", kill_on_drop: false }` [INFO] [stdout] f2e9046a47774f081cb81be1a493edf48bb59c4239a7b25d7482493043b0fbf9 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:90999bfc7ae267e83380e433d8e61a7c072ca6729e92edbae886d3423b3a6f4c" "/opt/rustwide/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "test" "--frozen" "--target" "x86_64-unknown-linux-musl", kill_on_drop: false }` [INFO] [stdout] 2deeb69c620a73afeb42d396f769c8a24e97d1b0508a681f9199f6f314f7171b [INFO] running `Command { std: "docker" "start" "-a" "2deeb69c620a73afeb42d396f769c8a24e97d1b0508a681f9199f6f314f7171b", kill_on_drop: false }` [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.06s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/checkm-3a297d1501072424) [INFO] [stdout] [INFO] [stdout] running 13 tests [INFO] [stdout] test test::test_checkm2_14column_format ... ok [INFO] [stdout] test test::test_fasta_ordering_4times_min_completeness ... ok [INFO] [stdout] test test::test_good_quality_genome_names ... ok [INFO] [stdout] test test::test_fasta_ordering_4times ... ok [INFO] [stdout] test test::test_retrieve ... ok [INFO] [stdout] test test::test_retrieve_checkm2_gzip ... ok [INFO] [stdout] test test::test_checkm2_good_quality_genome_names ... ok [INFO] [stdout] test test::test_retrieve_checkm2 ... ok [INFO] [stdout] test test::test_ordering_5times ... ok [INFO] [stdout] test test::test_retrieve_gzip ... ok [INFO] [stdout] test test::test_ordering_4times ... ok [INFO] [stdout] test test::test_checkm2_13column_format ... ok [INFO] [stdout] test test::test_absolute_path_retrieval ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 13 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.02s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "2deeb69c620a73afeb42d396f769c8a24e97d1b0508a681f9199f6f314f7171b", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "2deeb69c620a73afeb42d396f769c8a24e97d1b0508a681f9199f6f314f7171b", kill_on_drop: false }` [INFO] [stdout] 2deeb69c620a73afeb42d396f769c8a24e97d1b0508a681f9199f6f314f7171b