[INFO] fetching crate yacrd 0.6.2...
[INFO] testing yacrd-0.6.2 against try#c066bf6804adc55193b71afdff6a56922f4a8689+target=x86_64-unknown-linux-musl for musl_upgrade_1_2_5_in_2025-retry-1
[INFO] extracting crate yacrd 0.6.2 into /workspace/builds/worker-5-tc2/source
[INFO] started tweaking crates.io crate yacrd 0.6.2
[INFO] finished tweaking crates.io crate yacrd 0.6.2
[INFO] tweaked toml for crates.io crate yacrd 0.6.2 written to /workspace/builds/worker-5-tc2/source/Cargo.toml
[INFO] validating manifest of crates.io crate yacrd 0.6.2 on toolchain c066bf6804adc55193b71afdff6a56922f4a8689
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c066bf6804adc55193b71afdff6a56922f4a8689" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate crates.io crate yacrd 0.6.2 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c066bf6804adc55193b71afdff6a56922f4a8689" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:90999bfc7ae267e83380e433d8e61a7c072ca6729e92edbae886d3423b3a6f4c" "/opt/rustwide/cargo-home/bin/cargo" "+c066bf6804adc55193b71afdff6a56922f4a8689" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] a31c36f5d241e1235e3dfbef840195be23fef5118dc2105fc9c9fb39923bcf12
[INFO] running `Command { std: "docker" "start" "-a" "a31c36f5d241e1235e3dfbef840195be23fef5118dc2105fc9c9fb39923bcf12", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "a31c36f5d241e1235e3dfbef840195be23fef5118dc2105fc9c9fb39923bcf12", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "a31c36f5d241e1235e3dfbef840195be23fef5118dc2105fc9c9fb39923bcf12", kill_on_drop: false }`
[INFO] [stdout] a31c36f5d241e1235e3dfbef840195be23fef5118dc2105fc9c9fb39923bcf12
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:90999bfc7ae267e83380e433d8e61a7c072ca6729e92edbae886d3423b3a6f4c" "/opt/rustwide/cargo-home/bin/cargo" "+c066bf6804adc55193b71afdff6a56922f4a8689" "build" "--frozen" "--message-format=json" "--target" "x86_64-unknown-linux-musl", kill_on_drop: false }`
[INFO] [stdout] d5f09c2c3159e5ec650aa4148244f6568291b64cb8af46b67cc0f8c90d4e759e
[INFO] running `Command { std: "docker" "start" "-a" "d5f09c2c3159e5ec650aa4148244f6568291b64cb8af46b67cc0f8c90d4e759e", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.18
[INFO] [stderr]    Compiling unicode-xid v0.2.1
[INFO] [stderr]    Compiling autocfg v1.0.0
[INFO] [stderr]    Compiling syn v1.0.34
[INFO] [stderr]    Compiling libc v0.2.72
[INFO] [stderr]    Compiling cfg-if v0.1.10
[INFO] [stderr]    Compiling serde_derive v1.0.114
[INFO] [stderr]    Compiling memchr v2.3.3
[INFO] [stderr]    Compiling serde v1.0.114
[INFO] [stderr]    Compiling pkg-config v0.3.18
[INFO] [stderr]    Compiling cc v1.0.58
[INFO] [stderr]    Compiling lazy_static v1.4.0
[INFO] [stderr]    Compiling version_check v0.9.2
[INFO] [stderr]    Compiling getrandom v0.1.14
[INFO] [stderr]    Compiling byteorder v1.3.4
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]    Compiling unicode-segmentation v1.6.0
[INFO] [stderr]    Compiling thread_local v1.0.1
[INFO] [stderr]    Compiling regex-syntax v0.6.18
[INFO] [stderr]    Compiling quick-error v1.2.3
[INFO] [stderr]    Compiling crc32fast v1.2.0
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]    Compiling doc-comment v0.3.3
[INFO] [stderr]    Compiling ppv-lite86 v0.2.8
[INFO] [stderr]    Compiling feature-probe v0.1.1
[INFO] [stderr]    Compiling num-traits v0.2.12
[INFO] [stderr]    Compiling num-integer v0.1.43
[INFO] [stderr]    Compiling hashbrown v0.8.1
[INFO] [stderr]    Compiling num-complex v0.2.4
[INFO] [stderr]    Compiling proc-macro-error-attr v0.4.12
[INFO] [stderr]    Compiling proc-macro-error v0.4.12
[INFO] [stderr]    Compiling heck v0.3.1
[INFO] [stderr]    Compiling aho-corasick v0.7.13
[INFO] [stderr]    Compiling ryu v1.0.5
[INFO] [stderr]    Compiling regex-automata v0.1.9
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling rand_core v0.5.1
[INFO] [stderr]    Compiling quote v1.0.7
[INFO] [stderr]    Compiling bv v0.11.1
[INFO] [stderr]    Compiling indexmap v1.5.0
[INFO] [stderr]    Compiling log v0.4.11
[INFO] [stderr]    Compiling rawpointer v0.2.1
[INFO] [stderr]    Compiling ndarray v0.13.1
[INFO] [stderr]    Compiling adler v0.2.3
[INFO] [stderr]    Compiling bitflags v1.2.1
[INFO] [stderr]    Compiling miniz_oxide v0.4.0
[INFO] [stderr]    Compiling matrixmultiply v0.2.3
[INFO] [stderr]    Compiling atty v0.2.14
[INFO] [stderr]    Compiling csv-core v0.1.10
[INFO] [stderr]    Compiling rand_chacha v0.2.2
[INFO] [stderr]    Compiling ordermap v0.3.5
[INFO] [stderr]    Compiling bio v0.31.0
[INFO] [stderr]    Compiling unicode-width v0.1.8
[INFO] [stderr]    Compiling either v1.5.3
[INFO] [stderr]    Compiling termcolor v1.1.0
[INFO] [stderr]    Compiling bit-vec v0.6.2
[INFO] [stderr]    Compiling fixedbitset v0.1.9
[INFO] [stderr]    Compiling itoa v0.4.6
[INFO] [stderr]    Compiling anyhow v1.0.31
[INFO] [stderr]    Compiling rand v0.7.3
[INFO] [stderr]    Compiling flate2 v1.0.16
[INFO] [stderr]    Compiling bit-set v0.5.2
[INFO] [stderr]    Compiling textwrap v0.11.0
[INFO] [stderr]    Compiling itertools v0.9.0
[INFO] [stderr]    Compiling fxhash v0.2.1
[INFO] [stderr]    Compiling petgraph v0.4.13
[INFO] [stderr]    Compiling humantime v1.3.0
[INFO] [stderr]    Compiling bytecount v0.6.0
[INFO] [stderr]    Compiling bzip2-sys v0.1.9+1.0.8
[INFO] [stderr]    Compiling lzma-sys v0.1.16
[INFO] [stderr]    Compiling custom_derive v0.1.7
[INFO] [stderr]    Compiling strum v0.18.0
[INFO] [stderr]    Compiling os_str_bytes v2.3.1
[INFO] [stderr]    Compiling strsim v0.10.0
[INFO] [stderr]    Compiling num-traits v0.1.43
[INFO] [stderr]    Compiling enum_primitive v0.1.1
[INFO] [stderr]    Compiling approx v0.3.2
[INFO] [stderr]    Compiling itertools-num v0.1.3
[INFO] [stderr]    Compiling ordered-float v1.1.0
[INFO] [stderr]    Compiling statrs v0.12.0
[INFO] [stderr]    Compiling regex v1.3.9
[INFO] [stderr]    Compiling env_logger v0.7.1
[INFO] [stderr]    Compiling bzip2 v0.3.3
[INFO] [stderr]    Compiling syn-mid v0.5.0
[INFO] [stderr]    Compiling snafu-derive v0.6.8
[INFO] [stderr]    Compiling derive-new v0.5.8
[INFO] [stderr]    Compiling thiserror-impl v1.0.20
[INFO] [stderr]    Compiling getset v0.0.9
[INFO] [stderr]    Compiling strum_macros v0.18.0
[INFO] [stderr]    Compiling clap_derive v3.0.0-beta.1
[INFO] [stderr]    Compiling thiserror v1.0.20
[INFO] [stderr]    Compiling snafu v0.6.8
[INFO] [stderr]    Compiling xz2 v0.1.6
[INFO] [stderr]    Compiling niffler v2.2.0
[INFO] [stderr]    Compiling vec_map v0.8.2
[INFO] [stderr]    Compiling bstr v0.2.13
[INFO] [stderr]    Compiling bio-types v0.7.0
[INFO] [stderr]    Compiling multimap v0.6.0
[INFO] [stderr]    Compiling clap v3.0.0-beta.1
[INFO] [stderr]    Compiling csv v1.1.3
[INFO] [stderr]    Compiling yacrd v0.6.2 (/opt/rustwide/workdir)
[INFO] [stdout] warning: unused import: `self::fullmemory::*`
[INFO] [stdout]   --> src/reads2ovl/mod.rs:35:9
[INFO] [stdout]    |
[INFO] [stdout] 35 | pub use self::fullmemory::*;
[INFO] [stdout]    |         ^^^^^^^^^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(unused_imports)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 32.84s
[INFO] running `Command { std: "docker" "inspect" "d5f09c2c3159e5ec650aa4148244f6568291b64cb8af46b67cc0f8c90d4e759e", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "d5f09c2c3159e5ec650aa4148244f6568291b64cb8af46b67cc0f8c90d4e759e", kill_on_drop: false }`
[INFO] [stdout] d5f09c2c3159e5ec650aa4148244f6568291b64cb8af46b67cc0f8c90d4e759e
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:90999bfc7ae267e83380e433d8e61a7c072ca6729e92edbae886d3423b3a6f4c" "/opt/rustwide/cargo-home/bin/cargo" "+c066bf6804adc55193b71afdff6a56922f4a8689" "test" "--frozen" "--no-run" "--message-format=json" "--target" "x86_64-unknown-linux-musl", kill_on_drop: false }`
[INFO] [stdout] 8be25456157d3778874d9f898c30f1f89153baa32c5295a4ab0d5566e8d1a327
[INFO] running `Command { std: "docker" "start" "-a" "8be25456157d3778874d9f898c30f1f89153baa32c5295a4ab0d5566e8d1a327", kill_on_drop: false }`
[INFO] [stderr]    Compiling remove_dir_all v0.5.3
[INFO] [stderr]    Compiling tempfile v3.1.0
[INFO] [stderr]    Compiling yacrd v0.6.2 (/opt/rustwide/workdir)
[INFO] [stdout] warning: unused import: `self::fullmemory::*`
[INFO] [stdout]   --> src/reads2ovl/mod.rs:35:9
[INFO] [stdout]    |
[INFO] [stdout] 35 | pub use self::fullmemory::*;
[INFO] [stdout]    |         ^^^^^^^^^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(unused_imports)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: linking with `cc` failed: exit status: 1
[INFO] [stdout]   |
[INFO] [stdout]   = note:  "cc" "-m64" "<sysroot>/lib/rustlib/x86_64-unknown-linux-musl/lib/self-contained/rcrt1.o" "<sysroot>/lib/rustlib/x86_64-unknown-linux-musl/lib/self-contained/crti.o" "<sysroot>/lib/rustlib/x86_64-unknown-linux-musl/lib/self-contained/crtbeginS.o" "/tmp/rustc1Fq7GK/symbols.o" "<9 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/{libenv_logger-8dd657021b9a3fc5.rlib,libhumantime-8d8e09eea03a30a0.rlib,libniffler-1e7278d145e76482.rlib,libflate2-6f66fd95a28f890a.rlib,libminiz_oxide-47ac8380a6051467.rlib,libadler-cfae5593f0297367.rlib,libcrc32fast-061a844a3ae1fd0f.rlib,libenum_primitive-4a4dafa5241b0800.rlib,libnum_traits-fc913c5602a35351.rlib}.rlib" "<sysroot>/lib/rustlib/x86_64-unknown-linux-musl/lib/{libtest-*,libgetopts-*,libunicode_width-*,librustc_std_workspace_std-*}.rlib" "/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/{libthiserror-223dcd32fa5ec150.rlib,liblog-9eb3e35e0f591e8b.rlib,libbio-cdb9adf427e3a8e5.rlib,libstrum-5019fda0e650a0ac.rlib,libitertools_num-f6ec18f2f180b185.rlib,libstatrs-611b2a0f1b000a6f.rlib,libordered_float-d1f0145d7ddce26e.rlib,libndarray-2202592eca0e4bcb.rlib,libmatrixmultiply-482b47bad5f02851.rlib,libnum_complex-9bf41202e3515d83.rlib,librawpointer-ee8696fe85e6dce4.rlib,libmultimap-1f6acdbf64e42797.rlib,libitertools-a074290a8ac42da6.rlib,libeither-00eb09499d51fa78.rlib,libcsv-c1f3976f9ccbe213.rlib,libryu-af883cd9b444a782.rlib,libitoa-a59540a3a09fb750.rlib,libcsv_core-7f119a27c4786805.rlib,libbstr-df654726b90da958.rlib,libregex_automata-98fff21112fa756f.rlib,libnum_integer-7be4e8ca30bb64f9.rlib,libbv-fd1c7b8a703c5a69.rlib,libbytecount-50bf2b2e6bbbb8b5.rlib,libbit_set-323d2533ed8eec84.rlib,libbit_vec-0097a1ca6de5c5b5.rlib,libbio_types-8ac485997242ac2f.rlib,libregex-430e00fca47259de.rlib,libthread_local-c6b88a4b7954c5cd.rlib,libregex_syntax-cb353ff079726287.rlib,libaho_corasick-61bf4caab8600cce.rlib,libmemchr-66f21ea766679294.rlib,libquick_error-022321fe562bcedb.rlib,libfxhash-fb1b8bdd7d9c2822.rlib,libbyteorder-549def2b2525ef52.rlib,libpetgraph-629e15990cc97b34.rlib,libordermap-5964eaff9916da95.rlib,libfixedbitset-47f9476be0dee6db.rlib,libsnafu-220836e3c23f56df.rlib,libdoc_comment-371febfbc0981078.rlib,libnewtype_derive-f91eed88f8acaf26.rlib,libcustom_derive-d11a0801595e3fc6.rlib,libapprox-0cf074421d08e1c8.rlib,libnum_traits-456b087618172f7d.rlib,libclap-84b8ea90fac5eb75.rlib,libstrsim-7a71560e0c2955e4.rlib,libatty-db60c269d809fbc0.rlib,libtextwrap-8f512d08ba4810ae.rlib,libtermcolor-2ea4a539468aa6b0.rlib,libvec_map-0230e48076b14416.rlib,libserde-e080fc488101e943.rlib,libos_str_bytes-7aacd3e48f0bbf1b.rlib,libindexmap-d1570c017a02e152.rlib,libhashbrown-c7508ee852595303.rlib,libunicode_width-a8c49d31449f9404.rlib,libbitflags-561a4f1321538a32.rlib,liblazy_static-4b136fc9bfbd2c4b.rlib,libanyhow-5d20611b921e8e90.rlib,libtempfile-48f12bbe04bdfd9f.rlib,librand-13d49905ccf2ac98.rlib,librand_chacha-c92b881bacc2f153.rlib,libppv_lite86-ef53971f935c91f9.rlib,librand_core-5a38e12979959a50.rlib,libgetrandom-0afe9745c20cc309.rlib,liblibc-81e87d35ea52d121.rlib,libremove_dir_all-4e221c62d36b2749.rlib,libcfg_if-2d17986ae484e939.rlib}.rlib" "<sysroot>/lib/rustlib/x86_64-unknown-linux-musl/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*}.rlib" "-lunwind" "<sysroot>/lib/rustlib/x86_64-unknown-linux-musl/lib/{libcfg_if-*,liblibc-*}.rlib" "-lc" "<sysroot>/lib/rustlib/x86_64-unknown-linux-musl/lib/{librustc_std_workspace_core-*,liballoc-*,libcore-*,libcompiler_builtins-*}.rlib" "-L" "/tmp/rustc1Fq7GK/raw-dylibs" "-Wl,-Bdynamic" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-nostartfiles" "-L" "/opt/rustwide/target/x86_64-unknown-linux-musl/debug/build/bzip2-sys-aad1f338e7789b6e/out/lib" "-L" "/opt/rustwide/target/x86_64-unknown-linux-musl/debug/build/lzma-sys-dca2416cd1e85625/out" "-L" "<sysroot>/lib/rustlib/x86_64-unknown-linux-musl/lib/self-contained" "-L" "<sysroot>/lib/rustlib/x86_64-unknown-linux-musl/lib" "-o" "/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/yacrd-c4d9f13b604ff146" "-Wl,--gc-sections" "-static-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs" "<sysroot>/lib/rustlib/x86_64-unknown-linux-musl/lib/self-contained/crtendS.o" "<sysroot>/lib/rustlib/x86_64-unknown-linux-musl/lib/self-contained/crtn.o"
[INFO] [stdout]   = note: some arguments are omitted. use `--verbose` to show all linker arguments
[INFO] [stdout]   = note: /usr/bin/ld: /opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/libgetrandom-0afe9745c20cc309.rlib(getrandom-0afe9745c20cc309.getrandom.2825e2aeb8860349-cgu.0.rcgu.o): in function `getrandom::util_libc::open_readonly':
[INFO] [stdout]           /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/getrandom-0.1.14/src/util_libc.rs:112:(.text._ZN9getrandom9util_libc13open_readonly17h0cdc88924bac4b7bE+0x79): undefined reference to `open64'
[INFO] [stdout]           collect2: error: ld returned 1 exit status
[INFO] [stdout]           
[INFO] [stdout]   = note: some `extern` functions couldn't be found; some native libraries may need to be installed or have their path specified
[INFO] [stdout]   = note: use the `-l` flag to specify native libraries to link
[INFO] [stdout]   = note: use the `cargo:rustc-link-lib` directive to specify the native libraries to link with Cargo (see https://doc.rust-lang.org/cargo/reference/build-scripts.html#rustc-link-lib)
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr] error: could not compile `yacrd` (bin "yacrd" test) due to 1 previous error; 1 warning emitted
[INFO] running `Command { std: "docker" "inspect" "8be25456157d3778874d9f898c30f1f89153baa32c5295a4ab0d5566e8d1a327", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "8be25456157d3778874d9f898c30f1f89153baa32c5295a4ab0d5566e8d1a327", kill_on_drop: false }`
[INFO] [stdout] 8be25456157d3778874d9f898c30f1f89153baa32c5295a4ab0d5566e8d1a327