[INFO] cloning repository https://github.com/mbhall88/psdm [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/mbhall88/psdm" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fmbhall88%2Fpsdm", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fmbhall88%2Fpsdm'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] d12fabdb6fe103b494d5767e31bdb67d4c8d2604 [INFO] testing mbhall88/psdm against try#c066bf6804adc55193b71afdff6a56922f4a8689+target=x86_64-unknown-linux-musl for musl_upgrade_1_2_5_in_2025-retry-1 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fmbhall88%2Fpsdm" "/workspace/builds/worker-4-tc2/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-4-tc2/source'... [INFO] [stderr] done. [INFO] started tweaking git repo https://github.com/mbhall88/psdm [INFO] finished tweaking git repo https://github.com/mbhall88/psdm [INFO] tweaked toml for git repo https://github.com/mbhall88/psdm written to /workspace/builds/worker-4-tc2/source/Cargo.toml [INFO] validating manifest of git repo https://github.com/mbhall88/psdm on toolchain c066bf6804adc55193b71afdff6a56922f4a8689 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c066bf6804adc55193b71afdff6a56922f4a8689" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate git repo https://github.com/mbhall88/psdm already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c066bf6804adc55193b71afdff6a56922f4a8689" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:90999bfc7ae267e83380e433d8e61a7c072ca6729e92edbae886d3423b3a6f4c" "/opt/rustwide/cargo-home/bin/cargo" "+c066bf6804adc55193b71afdff6a56922f4a8689" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 42a1777d8b5b6cec3d9a382f77a3aaca88b7c54fa501038f8a7108337448805f [INFO] running `Command { std: "docker" "start" "-a" "42a1777d8b5b6cec3d9a382f77a3aaca88b7c54fa501038f8a7108337448805f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "42a1777d8b5b6cec3d9a382f77a3aaca88b7c54fa501038f8a7108337448805f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "42a1777d8b5b6cec3d9a382f77a3aaca88b7c54fa501038f8a7108337448805f", kill_on_drop: false }` [INFO] [stdout] 42a1777d8b5b6cec3d9a382f77a3aaca88b7c54fa501038f8a7108337448805f [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:90999bfc7ae267e83380e433d8e61a7c072ca6729e92edbae886d3423b3a6f4c" "/opt/rustwide/cargo-home/bin/cargo" "+c066bf6804adc55193b71afdff6a56922f4a8689" "build" "--frozen" "--message-format=json" "--target" "x86_64-unknown-linux-musl", kill_on_drop: false }` [INFO] [stdout] 0c14af2a52e92cdd4c69d24606ed1ade4d16169c9875c918ca7aa38e3742b18a [INFO] running `Command { std: "docker" "start" "-a" "0c14af2a52e92cdd4c69d24606ed1ade4d16169c9875c918ca7aa38e3742b18a", kill_on_drop: false }` [INFO] [stderr] Compiling autocfg v1.0.1 [INFO] [stderr] Compiling libc v0.2.105 [INFO] [stderr] Compiling proc-macro2 v1.0.32 [INFO] [stderr] Compiling crossbeam-utils v0.8.20 [INFO] [stderr] Compiling cc v1.0.71 [INFO] [stderr] Compiling pkg-config v0.3.22 [INFO] [stderr] Compiling syn v1.0.81 [INFO] [stderr] Compiling version_check v0.9.4 [INFO] [stderr] Compiling memchr v2.7.4 [INFO] [stderr] Compiling crc32fast v1.2.1 [INFO] [stderr] Compiling miniz_oxide v0.4.4 [INFO] [stderr] Compiling memoffset v0.6.4 [INFO] [stderr] Compiling quote v1.0.10 [INFO] [stderr] Compiling num-traits v0.2.14 [INFO] [stderr] Compiling proc-macro-error-attr v1.0.4 [INFO] [stderr] Compiling crossbeam-epoch v0.9.5 [INFO] [stderr] Compiling proc-macro-error v1.0.4 [INFO] [stderr] Compiling scopeguard v1.1.0 [INFO] [stderr] Compiling flate2 v1.0.22 [INFO] [stderr] Compiling aho-corasick v0.7.18 [INFO] [stderr] Compiling num-integer v0.1.44 [INFO] [stderr] Compiling indexmap v1.7.0 [INFO] [stderr] Compiling utf8parse v0.2.2 [INFO] [stderr] Compiling regex-syntax v0.6.25 [INFO] [stderr] Compiling rayon-core v1.12.1 [INFO] [stderr] Compiling anstyle-parse v0.2.4 [INFO] [stderr] Compiling bzip2-sys v0.1.11+1.0.8 [INFO] [stderr] Compiling lzma-sys v0.1.17 [INFO] [stderr] Compiling crossbeam-deque v0.8.1 [INFO] [stderr] Compiling bstr v1.9.1 [INFO] [stderr] Compiling crossbeam-channel v0.5.13 [INFO] [stderr] Compiling anstyle v1.0.7 [INFO] [stderr] Compiling anstyle-query v1.1.0 [INFO] [stderr] Compiling is_terminal_polyfill v1.70.0 [INFO] [stderr] Compiling hashbrown v0.11.2 [INFO] [stderr] Compiling regex v1.5.4 [INFO] [stderr] Compiling byteorder v1.4.3 [INFO] [stderr] Compiling log v0.4.21 [INFO] [stderr] Compiling heck v0.4.0 [INFO] [stderr] Compiling anyhow v1.0.44 [INFO] [stderr] Compiling rawpointer v0.2.1 [INFO] [stderr] Compiling os_str_bytes v6.1.0 [INFO] [stderr] Compiling bytes v1.6.0 [INFO] [stderr] Compiling colorchoice v1.0.1 [INFO] [stderr] Compiling either v1.6.1 [INFO] [stderr] Compiling anstream v0.6.14 [INFO] [stderr] Compiling clap_lex v0.2.0 [INFO] [stderr] Compiling noodles-bgzf v0.31.0 [INFO] [stderr] Compiling matrixmultiply v0.3.1 [INFO] [stderr] Compiling bzip2 v0.4.3 [INFO] [stderr] Compiling noodles-core v0.15.0 [INFO] [stderr] Compiling env_filter v0.1.0 [INFO] [stderr] Compiling num-complex v0.4.0 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling textwrap v0.15.0 [INFO] [stderr] Compiling humantime v2.1.0 [INFO] [stderr] Compiling termcolor v1.1.2 [INFO] [stderr] Compiling strsim v0.10.0 [INFO] [stderr] Compiling ndarray v0.15.3 [INFO] [stderr] Compiling env_logger v0.11.3 [INFO] [stderr] Compiling rayon v1.10.0 [INFO] [stderr] Compiling noodles-fasta v0.40.0 [INFO] [stderr] Compiling itertools v0.13.0 [INFO] [stderr] Compiling thiserror-impl v1.0.30 [INFO] [stderr] Compiling clap_derive v3.1.18 [INFO] [stderr] Compiling xz2 v0.1.6 [INFO] [stderr] Compiling thiserror v1.0.30 [INFO] [stderr] Compiling bgzip v0.2.1 [INFO] [stderr] Compiling niffler v2.3.2 [INFO] [stderr] Compiling clap v3.1.18 [INFO] [stderr] Compiling psdm v0.3.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 52.26s [INFO] running `Command { std: "docker" "inspect" "0c14af2a52e92cdd4c69d24606ed1ade4d16169c9875c918ca7aa38e3742b18a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "0c14af2a52e92cdd4c69d24606ed1ade4d16169c9875c918ca7aa38e3742b18a", kill_on_drop: false }` [INFO] [stdout] 0c14af2a52e92cdd4c69d24606ed1ade4d16169c9875c918ca7aa38e3742b18a [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:90999bfc7ae267e83380e433d8e61a7c072ca6729e92edbae886d3423b3a6f4c" "/opt/rustwide/cargo-home/bin/cargo" "+c066bf6804adc55193b71afdff6a56922f4a8689" "test" "--frozen" "--no-run" "--message-format=json" "--target" "x86_64-unknown-linux-musl", kill_on_drop: false }` [INFO] [stdout] e70fe1bc58800cc1cdbe5a2eb71aa2da7382aeb531b7f5f7378ba5b14827fdd1 [INFO] running `Command { std: "docker" "start" "-a" "e70fe1bc58800cc1cdbe5a2eb71aa2da7382aeb531b7f5f7378ba5b14827fdd1", kill_on_drop: false }` [INFO] [stderr] Compiling getrandom v0.2.3 [INFO] [stderr] Compiling predicates-core v1.0.2 [INFO] [stderr] Compiling doc-comment v0.3.3 [INFO] [stderr] Compiling ppv-lite86 v0.2.15 [INFO] [stderr] Compiling itertools v0.10.1 [INFO] [stderr] Compiling difflib v0.4.0 [INFO] [stderr] Compiling termtree v0.2.3 [INFO] [stderr] Compiling regex-automata v0.1.10 [INFO] [stderr] Compiling wait-timeout v0.2.0 [INFO] [stderr] Compiling rand_core v0.6.3 [INFO] [stderr] Compiling predicates-tree v1.0.4 [INFO] [stderr] Compiling remove_dir_all v0.5.3 [INFO] [stderr] Compiling bstr v0.2.17 [INFO] [stderr] Compiling rand_chacha v0.3.1 [INFO] [stderr] Compiling rand v0.8.4 [INFO] [stderr] Compiling tempfile v3.2.0 [INFO] [stderr] Compiling predicates v2.0.3 [INFO] [stderr] Compiling assert_cmd v2.0.2 [INFO] [stderr] Compiling psdm v0.3.0 (/opt/rustwide/workdir) [INFO] [stdout] error: linking with `cc` failed: exit status: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-m64" "/lib/rustlib/x86_64-unknown-linux-musl/lib/self-contained/rcrt1.o" "/lib/rustlib/x86_64-unknown-linux-musl/lib/self-contained/crti.o" "/lib/rustlib/x86_64-unknown-linux-musl/lib/self-contained/crtbeginS.o" "/tmp/rustc7rUSeB/symbols.o" "<2 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/{libtempfile-6d984e84fb9d67c2.rlib,librand-82119d3630abced2.rlib,librand_chacha-bf7e97b7a2e36b75.rlib,libppv_lite86-7955ccdf208dacd3.rlib,librand_core-db2e58ded7e1eae5.rlib,libgetrandom-61d51b4384cce2c6.rlib,libremove_dir_all-4e221c62d36b2749.rlib,libcfg_if-66d55f6b302e88c8.rlib}.rlib" "/lib/rustlib/x86_64-unknown-linux-musl/lib/{libtest-*,libgetopts-*,libunicode_width-*,librustc_std_workspace_std-*}.rlib" "/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/{libassert_cmd-9110270b7f69dead.rlib,libwait_timeout-297097d5609cd1c4.rlib,liblibc-2e5e8532064393b9.rlib,libdoc_comment-371febfbc0981078.rlib,libbstr-3e6ee01d12a91709.rlib,liblazy_static-4b136fc9bfbd2c4b.rlib,libregex_automata-2f772042de7a2dcd.rlib,libmemchr-8eb551391861f369.rlib,libpredicates_tree-9bd43766b3d88441.rlib,libtermtree-43a2e2d39cea94f0.rlib,libpredicates-97d73082a45a8e97.rlib,libitertools-c417794deef697b0.rlib,libeither-66b4fb446a87d31c.rlib,libdifflib-40c14af9a71dea40.rlib,libpredicates_core-208992b886e968bd.rlib}.rlib" "/lib/rustlib/x86_64-unknown-linux-musl/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*}.rlib" "-lunwind" "/lib/rustlib/x86_64-unknown-linux-musl/lib/{libcfg_if-*,liblibc-*}.rlib" "-lc" "/lib/rustlib/x86_64-unknown-linux-musl/lib/{librustc_std_workspace_core-*,liballoc-*,libcore-*,libcompiler_builtins-*}.rlib" "-L" "/tmp/rustc7rUSeB/raw-dylibs" "-Wl,-Bdynamic" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-nostartfiles" "-L" "/opt/rustwide/target/x86_64-unknown-linux-musl/debug/build/bzip2-sys-b5dbb40ee812c386/out/lib" "-L" "/opt/rustwide/target/x86_64-unknown-linux-musl/debug/build/lzma-sys-0b330e7bdf6edd3b/out" "-L" "/lib/rustlib/x86_64-unknown-linux-musl/lib/self-contained" "-L" "/lib/rustlib/x86_64-unknown-linux-musl/lib" "-o" "/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/main-2c0af81faf963b68" "-Wl,--gc-sections" "-static-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs" "/lib/rustlib/x86_64-unknown-linux-musl/lib/self-contained/crtendS.o" "/lib/rustlib/x86_64-unknown-linux-musl/lib/self-contained/crtn.o" [INFO] [stdout] = note: some arguments are omitted. use `--verbose` to show all linker arguments [INFO] [stdout] = note: /usr/bin/ld: /opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/libgetrandom-61d51b4384cce2c6.rlib(getrandom-61d51b4384cce2c6.getrandom.952dd81301ecce0-cgu.0.rcgu.o): in function `getrandom::util_libc::open_readonly': [INFO] [stdout] /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/getrandom-0.2.3/src/util_libc.rs:110:(.text._ZN9getrandom9util_libc13open_readonly17h6046831dfbbc6d16E+0xb6): undefined reference to `open64' [INFO] [stdout] collect2: error: ld returned 1 exit status [INFO] [stdout] [INFO] [stdout] = note: some `extern` functions couldn't be found; some native libraries may need to be installed or have their path specified [INFO] [stdout] = note: use the `-l` flag to specify native libraries to link [INFO] [stdout] = note: use the `cargo:rustc-link-lib` directive to specify the native libraries to link with Cargo (see https://doc.rust-lang.org/cargo/reference/build-scripts.html#rustc-link-lib) [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] error: could not compile `psdm` (test "main") due to 1 previous error [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] running `Command { std: "docker" "inspect" "e70fe1bc58800cc1cdbe5a2eb71aa2da7382aeb531b7f5f7378ba5b14827fdd1", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "e70fe1bc58800cc1cdbe5a2eb71aa2da7382aeb531b7f5f7378ba5b14827fdd1", kill_on_drop: false }` [INFO] [stdout] e70fe1bc58800cc1cdbe5a2eb71aa2da7382aeb531b7f5f7378ba5b14827fdd1