[INFO] cloning repository https://github.com/guertinlab/seqOutBias
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/guertinlab/seqOutBias" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fguertinlab%2FseqOutBias", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fguertinlab%2FseqOutBias'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 1446ebc35d1cf5ede03fe87fab7650a5e8c0516d
[INFO] testing guertinlab/seqOutBias/1446ebc35d1cf5ede03fe87fab7650a5e8c0516d against try#8de4c7234dd9b97c9d76b58671343fdbbc9a433e+target=x86_64-unknown-linux-musl for musl_upgrade_1_2_5_in_2025-retry-1
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fguertinlab%2FseqOutBias" "/workspace/builds/worker-7-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-7-tc1/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/guertinlab/seqOutBias
[INFO] finished tweaking git repo https://github.com/guertinlab/seqOutBias
[INFO] tweaked toml for git repo https://github.com/guertinlab/seqOutBias written to /workspace/builds/worker-7-tc1/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/guertinlab/seqOutBias on toolchain 8de4c7234dd9b97c9d76b58671343fdbbc9a433e
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/guertinlab/seqOutBias already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr] warning: /workspace/builds/worker-7-tc1/source/Cargo.toml: no edition set: defaulting to the 2015 edition while the latest is 2024
[INFO] [stderr] warning: /workspace/builds/worker-7-tc1/source/profile/Cargo.toml: no edition set: defaulting to the 2015 edition while the latest is 2024
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded strsim v0.5.2
[INFO] [stderr]   Downloaded ieee754 v0.2.2
[INFO] [stderr]   Downloaded assert_cmd v0.4.0
[INFO] [stderr]   Downloaded docopt v0.6.86
[INFO] [stderr]   Downloaded flate2 v0.2.18
[INFO] [stderr]   Downloaded cbindgen v0.13.2
[INFO] [stderr]   Downloaded predicates v0.5.2
[INFO] [stderr]   Downloaded escargot v0.2.0
[INFO] [stderr]   Downloaded bincode v0.5.9
[INFO] [stderr]   Downloaded rust-htslib v0.12.1
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:90999bfc7ae267e83380e433d8e61a7c072ca6729e92edbae886d3423b3a6f4c" "/opt/rustwide/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 293880dc44fac1ce1614a596e1d4bed99f5b123369b49659ecb9c800ff0fd2a9
[INFO] running `Command { std: "docker" "start" "-a" "293880dc44fac1ce1614a596e1d4bed99f5b123369b49659ecb9c800ff0fd2a9", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "293880dc44fac1ce1614a596e1d4bed99f5b123369b49659ecb9c800ff0fd2a9", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "293880dc44fac1ce1614a596e1d4bed99f5b123369b49659ecb9c800ff0fd2a9", kill_on_drop: false }`
[INFO] [stdout] 293880dc44fac1ce1614a596e1d4bed99f5b123369b49659ecb9c800ff0fd2a9
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:90999bfc7ae267e83380e433d8e61a7c072ca6729e92edbae886d3423b3a6f4c" "/opt/rustwide/cargo-home/bin/cargo" "+8de4c7234dd9b97c9d76b58671343fdbbc9a433e" "build" "--frozen" "--message-format=json" "--target" "x86_64-unknown-linux-musl", kill_on_drop: false }`
[INFO] [stdout] e1402f7701b4f272fcf9544170eb4c6585e6bffd400b54d6ebcd694f5f5c6dbb
[INFO] running `Command { std: "docker" "start" "-a" "e1402f7701b4f272fcf9544170eb4c6585e6bffd400b54d6ebcd694f5f5c6dbb", kill_on_drop: false }`
[INFO] [stderr] warning: /opt/rustwide/workdir/Cargo.toml: no edition set: defaulting to the 2015 edition while the latest is 2024
[INFO] [stderr] warning: /opt/rustwide/workdir/profile/Cargo.toml: no edition set: defaulting to the 2015 edition while the latest is 2024
[INFO] [stderr]    Compiling libc v0.2.92
[INFO] [stderr]    Compiling proc-macro2 v1.0.26
[INFO] [stderr]    Compiling unicode-xid v0.2.1
[INFO] [stderr]    Compiling syn v1.0.68
[INFO] [stderr]    Compiling winapi-build v0.1.1
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]    Compiling winapi v0.2.8
[INFO] [stderr]    Compiling serde_derive v1.0.125
[INFO] [stderr]    Compiling fnv v1.0.7
[INFO] [stderr]    Compiling matches v0.1.6
[INFO] [stderr]    Compiling ident_case v1.0.1
[INFO] [stderr]    Compiling gcc v0.3.45
[INFO] [stderr]    Compiling strsim v0.10.0
[INFO] [stderr]    Compiling unicode-normalization v0.1.5
[INFO] [stderr]    Compiling serde v1.0.125
[INFO] [stderr]    Compiling utf8-ranges v0.1.3
[INFO] [stderr]    Compiling unicode-bidi v0.3.4
[INFO] [stderr]    Compiling percent-encoding v1.0.0
[INFO] [stderr]    Compiling lazy_static v0.2.6
[INFO] [stderr]    Compiling rustc-serialize v0.3.23
[INFO] [stderr]    Compiling regex-syntax v0.3.9
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]    Compiling kernel32-sys v0.2.2
[INFO] [stderr]    Compiling either v1.1.0
[INFO] [stderr]    Compiling rust-htslib v0.12.1
[INFO] [stderr]    Compiling serde v0.7.15
[INFO] [stderr]    Compiling strsim v0.5.2
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling seqOutBias v1.4.0 (/opt/rustwide/workdir)
[INFO] [stderr]    Compiling byteorder v0.5.3
[INFO] [stderr]    Compiling num-traits v0.1.37
[INFO] [stdout] error[E0310]: the parameter type `T` may not live long enough
[INFO] [stdout]     --> /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/rustc-serialize-0.3.23/src/serialize.rs:1155:5
[INFO] [stdout]      |
[INFO] [stdout] 1155 |     fn decode<D: Decoder>(d: &mut D) -> Result<Cow<'static, T>, D::Error> {
[INFO] [stdout]      |     ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout]      |     |
[INFO] [stdout]      |     the parameter type `T` must be valid for the static lifetime...
[INFO] [stdout]      |     ...so that the type `T` will meet its required lifetime bounds...
[INFO] [stdout]      |
[INFO] [stdout] note: ...that is required by this bound
[INFO] [stdout]     --> /rustc/8de4c7234dd9b97c9d76b58671343fdbbc9a433e/library/alloc/src/borrow.rs:179:30
[INFO] [stdout] help: consider adding an explicit lifetime bound
[INFO] [stdout]      |
[INFO] [stdout] 1151 | impl<'a, T: ?Sized + 'static> Decodable for Cow<'a, T>
[INFO] [stdout]      |                    +++++++++
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]    Compiling bitflags v0.9.1
[INFO] [stderr]    Compiling itertools v0.6.0
[INFO] [stderr]    Compiling custom_derive v0.1.7
[INFO] [stderr]    Compiling ieee754 v0.2.2
[INFO] [stderr]    Compiling quick-error v1.2.0
[INFO] [stderr]    Compiling idna v0.1.2
[INFO] [stderr] rustc-LLVM ERROR: IO failure on output stream: No space left on device
[INFO] [stderr] error: could not compile `num-traits` (lib)
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   No space left on device (os error 28)
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   failed to parse process output: `/opt/rustwide/rustup-home/toolchains/8de4c7234dd9b97c9d76b58671343fdbbc9a433e/bin/rustc --crate-name num_traits --edition=2015 /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/num-traits-0.1.37/src/lib.rs --error-format=json --json=diagnostic-rendered-ansi,artifacts,future-incompat --crate-type lib --emit=dep-info,metadata,link -C embed-bitcode=no -C debuginfo=2 --check-cfg 'cfg(docsrs,test)' --check-cfg 'cfg(feature, values())' -C metadata=9fde2b062d5f8e27 -C extra-filename=-0f6bb0e894a029f4 --out-dir /opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps --target x86_64-unknown-linux-musl -L dependency=/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps -L dependency=/opt/rustwide/target/debug/deps --cap-lints allow --cap-lints=forbid` (exit status: 101)
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] [stdout] error: failed to build archive at `/opt/rustwide/target/debug/deps/libgcc-3813e4ea7b0df35b.rlib`: No space left on device (os error 28)
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr] error: could not compile `gcc` (lib) due to 1 previous error
[INFO] [stderr] rustc-LLVM ERROR: IO failure on output stream: No space left on device
[INFO] [stderr] error: could not compile `regex-syntax` (lib)
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   No space left on device (os error 28)
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   failed to parse process output: `/opt/rustwide/rustup-home/toolchains/8de4c7234dd9b97c9d76b58671343fdbbc9a433e/bin/rustc --crate-name regex_syntax --edition=2015 /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/regex-syntax-0.3.9/src/lib.rs --error-format=json --json=diagnostic-rendered-ansi,artifacts,future-incompat --crate-type lib --emit=dep-info,metadata,link -C embed-bitcode=no -C debuginfo=2 --check-cfg 'cfg(docsrs,test)' --check-cfg 'cfg(feature, values())' -C metadata=e2968c8f9f12eec0 -C extra-filename=-9b6203ae213220e3 --out-dir /opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps --target x86_64-unknown-linux-musl -L dependency=/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps -L dependency=/opt/rustwide/target/debug/deps --cap-lints allow --cap-lints=forbid` (exit status: 101)
[INFO] [stderr] rustc-LLVM ERROR: IO failure on output stream: No space left on device
[INFO] [stderr] warning: libc@0.2.92: "libc's use_std cargo feature is deprecated since libc 0.2.55; please consider using the `std` cargo feature instead"
[INFO] [stderr] error: could not compile `libc` (lib)
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   No space left on device (os error 28)
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   failed to parse process output: `/opt/rustwide/rustup-home/toolchains/8de4c7234dd9b97c9d76b58671343fdbbc9a433e/bin/rustc --crate-name libc --edition=2015 /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/libc-0.2.92/src/lib.rs --error-format=json --json=diagnostic-rendered-ansi,artifacts,future-incompat --crate-type lib --emit=dep-info,metadata,link -C embed-bitcode=no -C debuginfo=2 --cfg 'feature="default"' --cfg 'feature="std"' --cfg 'feature="use_std"' --check-cfg 'cfg(docsrs,test)' --check-cfg 'cfg(feature, values("align", "const-extern-fn", "default", "extra_traits", "rustc-dep-of-std", "rustc-std-workspace-core", "std", "use_std"))' -C metadata=9d10ed4b7c9e4ad4 -C extra-filename=-6693d9fc6bed08c2 --out-dir /opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps --target x86_64-unknown-linux-musl -L dependency=/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps -L dependency=/opt/rustwide/target/debug/deps --cap-lints allow --cap-lints=forbid --cfg freebsd11 --cfg libc_priv_mod_use --cfg libc_union --cfg libc_const_size_of --cfg libc_align --cfg libc_core_cvoid --cfg libc_packedN --cfg libc_cfg_target_vendor` (exit status: 101)
[INFO] [stderr] rustc-LLVM ERROR: IO failure on output stream: No space left on device
[INFO] [stderr] error: could not compile `proc-macro2` (lib)
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   No space left on device (os error 28)
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   failed to parse process output: `/opt/rustwide/rustup-home/toolchains/8de4c7234dd9b97c9d76b58671343fdbbc9a433e/bin/rustc --crate-name proc_macro2 --edition=2018 /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/proc-macro2-1.0.26/src/lib.rs --error-format=json --json=diagnostic-rendered-ansi,artifacts,future-incompat --crate-type lib --emit=dep-info,metadata,link -C embed-bitcode=no -C debuginfo=2 --cfg 'feature="default"' --cfg 'feature="proc-macro"' --check-cfg 'cfg(docsrs,test)' --check-cfg 'cfg(feature, values("default", "nightly", "proc-macro", "span-locations"))' -C metadata=94cba5636084f29e -C extra-filename=-8c7176e4d62e8dcc --out-dir /opt/rustwide/target/debug/deps -L dependency=/opt/rustwide/target/debug/deps --extern unicode_xid=/opt/rustwide/target/debug/deps/libunicode_xid-4faa8a710957af11.rmeta --cap-lints allow --cfg lexerror_display --cfg hygiene --cfg use_proc_macro --cfg wrap_proc_macro --cfg proc_macro_span` (exit status: 101)
[INFO] [stdout] error: failed to write to `/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/rmetak1wVXi/full.rmeta`: No space left on device (os error 28)
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr] error: could not compile `itertools` (lib) due to 1 previous error
[INFO] [stdout] error: failed to write to `/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/rmetasIByN9/full.rmeta`: No space left on device (os error 28)
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr] error: could not compile `idna` (lib) due to 1 previous error
[INFO] [stdout] error: couldn't create a temp dir: No space left on device (os error 28) at path "/opt/rustwide/target/x86_64-unknown-linux-musl/debug/deps/rmetatlYJYZ"
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr] error: could not compile `serde` (lib) due to 1 previous error
[INFO] [stdout] For more information about this error, try `rustc --explain E0310`.
[INFO] [stdout] 
[INFO] [stderr] error: could not compile `rustc-serialize` (lib) due to 1 previous error
[INFO] running `Command { std: "docker" "inspect" "e1402f7701b4f272fcf9544170eb4c6585e6bffd400b54d6ebcd694f5f5c6dbb", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "e1402f7701b4f272fcf9544170eb4c6585e6bffd400b54d6ebcd694f5f5c6dbb", kill_on_drop: false }`
[INFO] [stdout] e1402f7701b4f272fcf9544170eb4c6585e6bffd400b54d6ebcd694f5f5c6dbb