[INFO] cloning repository https://github.com/swemeshy/counts_to_csv
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/swemeshy/counts_to_csv" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fswemeshy%2Fcounts_to_csv", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fswemeshy%2Fcounts_to_csv'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 416d6b6a25b07251ddbe10a79b9b16a97b0d73c7
[INFO] checking swemeshy/counts_to_csv against master#1f12b9b0fdbe735968ac002792a720f0ba4faca6 for crater-rollup-uwu
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fswemeshy%2Fcounts_to_csv" "/workspace/builds/worker-2-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-2-tc1/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/swemeshy/counts_to_csv on toolchain 1f12b9b0fdbe735968ac002792a720f0ba4faca6
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1f12b9b0fdbe735968ac002792a720f0ba4faca6" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/swemeshy/counts_to_csv
[INFO] finished tweaking git repo https://github.com/swemeshy/counts_to_csv
[INFO] tweaked toml for git repo https://github.com/swemeshy/counts_to_csv written to /workspace/builds/worker-2-tc1/source/Cargo.toml
[INFO] crate git repo https://github.com/swemeshy/counts_to_csv already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1f12b9b0fdbe735968ac002792a720f0ba4faca6" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating git repository `https://github.com/aldanor/hdf5-rust.git`
[INFO] [stderr]     Updating git submodule `https://github.com/HDFGroup/hdf5.git`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded pyo3-macros v0.13.2
[INFO] [stderr]   Downloaded inventory-impl v0.1.10
[INFO] [stderr]   Downloaded indoc-impl v0.3.6
[INFO] [stderr]   Downloaded indoc v0.3.6
[INFO] [stderr]   Downloaded inventory v0.1.10
[INFO] [stderr]   Downloaded pyo3-macros-backend v0.13.2
[INFO] [stderr]   Downloaded sprs v0.9.4
[INFO] [stderr]   Downloaded pyo3 v0.13.2
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:923055f121b5182466d55868a8b05e67af8ba4a3a3f6bad814e953ca3cd3ac2a" "/opt/rustwide/cargo-home/bin/cargo" "+1f12b9b0fdbe735968ac002792a720f0ba4faca6" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 0a7cbf4af28eff704085b25b9e4e90196da3e0720d15347d27def961da870f8f
[INFO] running `Command { std: "docker" "start" "-a" "0a7cbf4af28eff704085b25b9e4e90196da3e0720d15347d27def961da870f8f", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "0a7cbf4af28eff704085b25b9e4e90196da3e0720d15347d27def961da870f8f", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "0a7cbf4af28eff704085b25b9e4e90196da3e0720d15347d27def961da870f8f", kill_on_drop: false }`
[INFO] [stdout] 0a7cbf4af28eff704085b25b9e4e90196da3e0720d15347d27def961da870f8f
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:923055f121b5182466d55868a8b05e67af8ba4a3a3f6bad814e953ca3cd3ac2a" "/opt/rustwide/cargo-home/bin/cargo" "+1f12b9b0fdbe735968ac002792a720f0ba4faca6" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] e071d5a36119adf95387d1cb30ce6b0364a9a543168378c9ec08bcc815662dde
[INFO] running `Command { std: "docker" "start" "-a" "e071d5a36119adf95387d1cb30ce6b0364a9a543168378c9ec08bcc815662dde", kill_on_drop: false }`
[INFO] [stderr]    Compiling autocfg v1.0.1
[INFO] [stderr]    Compiling proc-macro2 v1.0.24
[INFO] [stderr]    Compiling unicode-xid v0.2.1
[INFO] [stderr]    Compiling libc v0.2.88
[INFO] [stderr]    Compiling syn v1.0.67
[INFO] [stderr]    Compiling memchr v2.3.4
[INFO] [stderr]     Checking cfg-if v1.0.0
[INFO] [stderr]     Checking lazy_static v1.4.0
[INFO] [stderr]    Compiling libm v0.2.1
[INFO] [stderr]     Checking scopeguard v1.1.0
[INFO] [stderr]    Compiling version_check v0.9.3
[INFO] [stderr]    Compiling regex-syntax v0.6.23
[INFO] [stderr]    Compiling num-traits v0.2.14
[INFO] [stderr]    Compiling num-integer v0.1.44
[INFO] [stderr]    Compiling aho-corasick v0.7.15
[INFO] [stderr]    Compiling crossbeam-utils v0.8.3
[INFO] [stderr]    Compiling memoffset v0.6.1
[INFO] [stderr]    Compiling quote v1.0.9
[INFO] [stderr]    Compiling libloading v0.7.0
[INFO] [stderr]    Compiling proc-macro-hack v0.5.19
[INFO] [stderr]    Compiling pkg-config v0.3.19
[INFO] [stderr]     Checking rawpointer v0.2.1
[INFO] [stderr]    Compiling proc-macro-error-attr v1.0.4
[INFO] [stderr]    Compiling num-complex v0.2.4
[INFO] [stderr]    Compiling rayon-core v1.9.0
[INFO] [stderr]     Checking smallvec v1.6.1
[INFO] [stderr]    Compiling serde_derive v1.0.124
[INFO] [stderr]     Checking crossbeam-epoch v0.9.3
[INFO] [stderr]    Compiling proc-macro-error v1.0.4
[INFO] [stderr]     Checking instant v0.1.9
[INFO] [stderr]    Compiling serde v1.0.124
[INFO] [stderr]    Compiling bitflags v1.2.1
[INFO] [stderr]     Checking unicode-width v0.1.8
[INFO] [stderr]     Checking crossbeam-deque v0.8.0
[INFO] [stderr]     Checking parking_lot_core v0.8.3
[INFO] [stderr]     Checking crossbeam-channel v0.5.0
[INFO] [stderr]     Checking num_cpus v1.13.0
[INFO] [stderr]     Checking atty v0.2.14
[INFO] [stderr]    Compiling rayon v1.5.0
[INFO] [stderr]    Compiling indexmap v1.6.2
[INFO] [stderr]    Compiling regex v1.4.4
[INFO] [stderr]     Checking lock_api v0.4.2
[INFO] [stderr]     Checking byteorder v1.4.3
[INFO] [stderr]    Compiling hdf5-types v0.7.1 (https://github.com/aldanor/hdf5-rust.git?rev=24beeaa914a05c67adc78f0c161925fd4627d407#24beeaa9)
[INFO] [stderr]    Compiling inventory v0.1.10
[INFO] [stderr]    Compiling ryu v1.0.5
[INFO] [stderr]    Compiling unindent v0.1.7
[INFO] [stderr]    Compiling ndarray v0.13.1
[INFO] [stderr]    Compiling unicode-segmentation v1.7.1
[INFO] [stderr]    Compiling log v0.4.14
[INFO] [stderr]     Checking regex-automata v0.1.9
[INFO] [stderr]     Checking parking_lot v0.11.1
[INFO] [stderr]    Compiling heck v0.3.2
[INFO] [stderr]    Compiling paste-impl v0.1.18
[INFO] [stderr]     Checking num-complex v0.4.0
[INFO] [stderr]     Checking approx v0.3.2
[INFO] [stderr]     Checking matrixmultiply v0.2.4
[INFO] [stderr]     Checking matrixmultiply v0.3.1
[INFO] [stderr]     Checking terminal_size v0.1.16
[INFO] [stderr]     Checking time v0.1.44
[INFO] [stderr]    Compiling hdf5 v0.7.1 (https://github.com/aldanor/hdf5-rust.git?rev=24beeaa914a05c67adc78f0c161925fd4627d407#24beeaa9)
[INFO] [stderr]    Compiling anyhow v1.0.38
[INFO] [stderr]    Compiling pyo3 v0.13.2
[INFO] [stderr]     Checking ascii v1.0.0
[INFO] [stderr]     Checking hashbrown v0.9.1
[INFO] [stderr]     Checking either v1.6.1
[INFO] [stderr]     Checking chrono v0.4.19
[INFO] [stderr]     Checking ndarray v0.15.3
[INFO] [stderr]    Compiling pyo3-macros-backend v0.13.2
[INFO] [stderr]     Checking paste v0.1.18
[INFO] [stderr]     Checking alga v0.9.3
[INFO] [stderr]     Checking console v0.14.1
[INFO] [stderr]    Compiling hdf5-sys v0.7.1 (https://github.com/aldanor/hdf5-rust.git?rev=24beeaa914a05c67adc78f0c161925fd4627d407#24beeaa9)
[INFO] [stderr]     Checking colored v1.9.3
[INFO] [stderr]     Checking textwrap v0.12.1
[INFO] [stderr]     Checking csv-core v0.1.10
[INFO] [stderr]     Checking number_prefix v0.3.0
[INFO] [stderr]     Checking vec_map v0.8.2
[INFO] [stderr]     Checking os_str_bytes v2.4.0
[INFO] [stderr]     Checking termcolor v1.1.2
[INFO] [stderr]     Checking strsim v0.10.0
[INFO] [stderr]     Checking itoa v0.4.7
[INFO] [stderr]     Checking indicatif v0.15.0
[INFO] [stderr]     Checking simple_logger v1.11.0
[INFO] [stderr]    Compiling inventory-impl v0.1.10
[INFO] [stderr]    Compiling ctor v0.1.20
[INFO] [stderr]    Compiling indoc-impl v0.3.6
[INFO] [stderr]    Compiling ghost v0.1.2
[INFO] [stderr]    Compiling hdf5-derive v0.7.1 (https://github.com/aldanor/hdf5-rust.git?rev=24beeaa914a05c67adc78f0c161925fd4627d407#24beeaa9)
[INFO] [stderr]    Compiling pyo3-macros v0.13.2
[INFO] [stderr]     Checking indoc v0.3.6
[INFO] [stderr]    Compiling clap_derive v3.0.0-beta.2
[INFO] [stderr]     Checking sprs v0.9.4
[INFO] [stderr]     Checking clap v3.0.0-beta.2
[INFO] [stderr]     Checking bstr v0.2.15
[INFO] [stderr]     Checking csv v1.1.6
[INFO] [stderr]     Checking counts_to_csv v0.1.0 (/opt/rustwide/workdir)
[INFO] [stdout] warning: found module declaration for lib.rs
[INFO] [stdout]  --> src/main.rs:6:1
[INFO] [stdout]   |
[INFO] [stdout] 6 | mod lib;
[INFO] [stdout]   | ^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: lib.rs is the root of this crate's library target
[INFO] [stdout]   = help: to refer to it from other targets, use the library's name as the path
[INFO] [stdout]   = note: `#[warn(special_module_name)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: found module declaration for lib.rs
[INFO] [stdout]  --> src/main.rs:6:1
[INFO] [stdout]   |
[INFO] [stdout] 6 | mod lib;
[INFO] [stdout]   | ^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: lib.rs is the root of this crate's library target
[INFO] [stdout]   = help: to refer to it from other targets, use the library's name as the path
[INFO] [stdout]   = note: `#[warn(special_module_name)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 1 warning emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 1 warning emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 9.34s
[INFO] [stderr] warning: the following packages contain code that will be rejected by a future version of Rust: hdf5 v0.7.1 (https://github.com/aldanor/hdf5-rust.git?rev=24beeaa914a05c67adc78f0c161925fd4627d407#24beeaa9), pyo3 v0.13.2, pyo3-macros-backend v0.13.2
[INFO] [stderr] note: to see what the problems were, use the option `--future-incompat-report`, or run `cargo report future-incompatibilities --id 1`
[INFO] running `Command { std: "docker" "inspect" "e071d5a36119adf95387d1cb30ce6b0364a9a543168378c9ec08bcc815662dde", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "e071d5a36119adf95387d1cb30ce6b0364a9a543168378c9ec08bcc815662dde", kill_on_drop: false }`
[INFO] [stdout] e071d5a36119adf95387d1cb30ce6b0364a9a543168378c9ec08bcc815662dde