[INFO] cloning repository https://github.com/natir/cabanis [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/natir/cabanis" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fnatir%2Fcabanis", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fnatir%2Fcabanis'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 6e4174abef676cf1c586a7eb138f692cbd136d4c [INFO] checking natir/cabanis against master#1f12b9b0fdbe735968ac002792a720f0ba4faca6 for crater-rollup-uwu [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fnatir%2Fcabanis" "/workspace/builds/worker-0-tc1/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-0-tc1/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/natir/cabanis on toolchain 1f12b9b0fdbe735968ac002792a720f0ba4faca6 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1f12b9b0fdbe735968ac002792a720f0ba4faca6" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/natir/cabanis [INFO] finished tweaking git repo https://github.com/natir/cabanis [INFO] tweaked toml for git repo https://github.com/natir/cabanis written to /workspace/builds/worker-0-tc1/source/Cargo.toml [INFO] crate git repo https://github.com/natir/cabanis already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1f12b9b0fdbe735968ac002792a720f0ba4faca6" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Updating git repository `https://github.com/natir/cocktail` [INFO] [stderr] Updating git repository `https://github.com/luizirber/niffler.git` [INFO] [stderr] Updating git repository `https://github.com/natir/pcon.git` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded proc-macro-error v0.4.8 [INFO] [stderr] Downloaded proc-macro-error-attr v0.4.8 [INFO] [stderr] Downloaded doc-comment v0.3.1 [INFO] [stderr] Downloaded newtype_derive v0.1.6 [INFO] [stderr] Downloaded itertools-num v0.1.3 [INFO] [stderr] Downloaded bytecount v0.6.0 [INFO] [stderr] Downloaded xz2 v0.1.6 [INFO] [stderr] Downloaded csv-core v0.1.6 [INFO] [stderr] Downloaded snafu-derive v0.5.0 [INFO] [stderr] Downloaded multimap v0.6.0 [INFO] [stderr] Downloaded bio-types v0.5.1 [INFO] [stderr] Downloaded bv v0.11.0 [INFO] [stderr] Downloaded petgraph v0.5.0 [INFO] [stderr] Downloaded snafu v0.5.0 [INFO] [stderr] Downloaded flate2 v1.0.13 [INFO] [stderr] Downloaded statrs v0.11.0 [INFO] [stderr] Downloaded cbindgen v0.9.1 [INFO] [stderr] Downloaded bio v0.30.0 [INFO] [stderr] Downloaded ndarray v0.13.0 [INFO] [stderr] Downloaded backtrace v0.3.44 [INFO] [stderr] Downloaded lzma-sys v0.1.15 [INFO] [stderr] Downloaded bio v0.29.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:923055f121b5182466d55868a8b05e67af8ba4a3a3f6bad814e953ca3cd3ac2a" "/opt/rustwide/cargo-home/bin/cargo" "+1f12b9b0fdbe735968ac002792a720f0ba4faca6" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 32dbc3c4996d6a3176ccba5f546cdd40721f7ebaaec215f7289400a892f70a4f [INFO] running `Command { std: "docker" "start" "-a" "32dbc3c4996d6a3176ccba5f546cdd40721f7ebaaec215f7289400a892f70a4f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "32dbc3c4996d6a3176ccba5f546cdd40721f7ebaaec215f7289400a892f70a4f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "32dbc3c4996d6a3176ccba5f546cdd40721f7ebaaec215f7289400a892f70a4f", kill_on_drop: false }` [INFO] [stdout] 32dbc3c4996d6a3176ccba5f546cdd40721f7ebaaec215f7289400a892f70a4f [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:923055f121b5182466d55868a8b05e67af8ba4a3a3f6bad814e953ca3cd3ac2a" "/opt/rustwide/cargo-home/bin/cargo" "+1f12b9b0fdbe735968ac002792a720f0ba4faca6" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 4823a5981e496ed2ecba711b502810722167b77d483193257abaf2ca02d75b0a [INFO] running `Command { std: "docker" "start" "-a" "4823a5981e496ed2ecba711b502810722167b77d483193257abaf2ca02d75b0a", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.8 [INFO] [stderr] Compiling unicode-xid v0.2.0 [INFO] [stderr] Compiling libc v0.2.66 [INFO] [stderr] Compiling syn v1.0.14 [INFO] [stderr] Compiling autocfg v1.0.0 [INFO] [stderr] Compiling cc v1.0.50 [INFO] [stderr] Compiling serde v1.0.104 [INFO] [stderr] Checking rand_core v0.4.2 [INFO] [stderr] Compiling autocfg v0.1.7 [INFO] [stderr] Compiling memchr v2.3.0 [INFO] [stderr] Checking rand_core v0.3.1 [INFO] [stderr] Compiling byteorder v1.3.4 [INFO] [stderr] Compiling proc-macro2 v0.4.30 [INFO] [stderr] Compiling rustversion v1.0.2 [INFO] [stderr] Compiling num-traits v0.2.11 [INFO] [stderr] Compiling unicode-xid v0.1.0 [INFO] [stderr] Compiling rand_pcg v0.1.2 [INFO] [stderr] Compiling rand_chacha v0.1.1 [INFO] [stderr] Compiling syn v0.15.44 [INFO] [stderr] Compiling quote v1.0.2 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling unicode-segmentation v1.6.0 [INFO] [stderr] Compiling backtrace-sys v0.1.32 [INFO] [stderr] Checking aho-corasick v0.7.8 [INFO] [stderr] Compiling quote v0.6.13 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling bv v0.11.0 [INFO] [stderr] Compiling heck v0.3.1 [INFO] [stderr] Compiling rand v0.6.5 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling num-integer v0.1.42 [INFO] [stderr] Checking thread_local v1.0.1 [INFO] [stderr] Compiling ryu v1.0.2 [INFO] [stderr] Compiling doc-comment v0.3.1 [INFO] [stderr] Checking regex-syntax v0.6.14 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Checking regex-automata v0.1.8 [INFO] [stderr] Checking rand_os v0.1.3 [INFO] [stderr] Checking rand_hc v0.1.0 [INFO] [stderr] Checking rand_isaac v0.1.1 [INFO] [stderr] Checking rand_xorshift v0.1.1 [INFO] [stderr] Checking rand_jitter v0.1.4 [INFO] [stderr] Checking rawpointer v0.2.1 [INFO] [stderr] Compiling ndarray v0.13.0 [INFO] [stderr] Checking either v1.5.3 [INFO] [stderr] Checking rustc-demangle v0.1.16 [INFO] [stderr] Compiling pkg-config v0.3.17 [INFO] [stderr] Checking itertools v0.8.2 [INFO] [stderr] Checking matrixmultiply v0.2.3 [INFO] [stderr] Checking backtrace v0.3.44 [INFO] [stderr] Compiling lzma-sys v0.1.15 [INFO] [stderr] Checking csv-core v0.1.6 [INFO] [stderr] Compiling bzip2-sys v0.1.7 [INFO] [stderr] Checking atty v0.2.14 [INFO] [stderr] Checking itoa v0.4.5 [INFO] [stderr] Checking fixedbitset v0.1.9 [INFO] [stderr] Checking bit-vec v0.5.1 [INFO] [stderr] Compiling crc32fast v1.2.0 [INFO] [stderr] Checking unicode-width v0.1.7 [INFO] [stderr] Checking ordermap v0.3.5 [INFO] [stderr] Checking textwrap v0.11.0 [INFO] [stderr] Checking bit-set v0.5.1 [INFO] [stderr] Checking statrs v0.11.0 [INFO] [stderr] Checking ordered-float v1.0.2 [INFO] [stderr] Checking petgraph v0.4.13 [INFO] [stderr] Checking regex v1.3.4 [INFO] [stderr] Checking itertools-num v0.1.3 [INFO] [stderr] Checking approx v0.3.2 [INFO] [stderr] Checking fxhash v0.2.1 [INFO] [stderr] Compiling indexmap v1.3.2 [INFO] [stderr] Checking strsim v0.8.0 [INFO] [stderr] Checking ansi_term v0.11.0 [INFO] [stderr] Checking fnv v1.0.6 [INFO] [stderr] Checking strum v0.16.0 [INFO] [stderr] Checking custom_derive v0.1.7 [INFO] [stderr] Checking bytecount v0.6.0 [INFO] [stderr] Compiling log v0.4.8 [INFO] [stderr] Checking adler32 v1.0.4 [INFO] [stderr] Compiling bio v0.29.0 [INFO] [stderr] Checking miniz_oxide v0.3.6 [INFO] [stderr] Checking num-traits v0.1.43 [INFO] [stderr] Compiling bio v0.30.0 [INFO] [stderr] Compiling anyhow v1.0.26 [INFO] [stderr] Checking enum_primitive v0.1.1 [INFO] [stderr] Checking xz2 v0.1.6 [INFO] [stderr] Checking bzip2 v0.3.3 [INFO] [stderr] Checking flate2 v1.0.13 [INFO] [stderr] Checking humantime v1.3.0 [INFO] [stderr] Checking termcolor v1.1.0 [INFO] [stderr] Checking fixedbitset v0.2.0 [INFO] [stderr] Checking env_logger v0.7.1 [INFO] [stderr] Checking rustc-hash v1.1.0 [INFO] [stderr] Checking petgraph v0.5.0 [INFO] [stderr] Compiling syn-mid v0.5.0 [INFO] [stderr] Compiling snafu-derive v0.5.0 [INFO] [stderr] Compiling serde_derive v1.0.104 [INFO] [stderr] Compiling strum_macros v0.16.0 [INFO] [stderr] Compiling thiserror-impl v1.0.10 [INFO] [stderr] Compiling getset v0.0.9 [INFO] [stderr] Compiling proc-macro-error v0.4.8 [INFO] [stderr] Compiling proc-macro-error-attr v0.4.8 [INFO] [stderr] Checking snafu v0.5.0 [INFO] [stderr] Checking thiserror v1.0.10 [INFO] [stderr] Checking niffler v1.0.0 (https://github.com/luizirber/niffler.git?branch=api_1.0#c04f6da8) [INFO] [stderr] Compiling structopt-derive v0.4.2 [INFO] [stderr] Checking vec_map v0.8.1 [INFO] [stderr] Checking bstr v0.2.11 [INFO] [stderr] Checking multimap v0.6.0 [INFO] [stderr] Checking bio-types v0.5.1 [INFO] [stderr] Checking clap v2.33.0 [INFO] [stderr] Checking csv v1.1.3 [INFO] [stderr] Checking cocktail v0.1.0 (https://github.com/natir/cocktail#63737b24) [INFO] [stderr] Checking structopt v0.3.9 [INFO] [stderr] Checking pcon v0.1.0 (https://github.com/natir/pcon.git#b1aa339d) [INFO] [stderr] Checking cabanis v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused `#[macro_use]` import [INFO] [stdout] --> src/main.rs:25:1 [INFO] [stdout] | [INFO] [stdout] 25 | #[macro_use] [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `#[macro_use]` import [INFO] [stdout] --> src/main.rs:30:1 [INFO] [stdout] | [INFO] [stdout] 30 | #[macro_use] [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `#[macro_use]` import [INFO] [stdout] --> src/main.rs:25:1 [INFO] [stdout] | [INFO] [stdout] 25 | #[macro_use] [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `#[macro_use]` import [INFO] [stdout] --> src/main.rs:30:1 [INFO] [stdout] | [INFO] [stdout] 30 | #[macro_use] [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/graph/unitig.rs:165:9 [INFO] [stdout] | [INFO] [stdout] 165 | let mut unitig_graph = petgraph::graphmap::UnGraphMap::new(); [INFO] [stdout] | ----^^^^^^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_mut)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/graph/unitig.rs:165:9 [INFO] [stdout] | [INFO] [stdout] 165 | let mut unitig_graph = petgraph::graphmap::UnGraphMap::new(); [INFO] [stdout] | ----^^^^^^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_mut)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/graph/unitig.rs:247:5 [INFO] [stdout] | [INFO] [stdout] 247 | mut unitig_graph: petgraph::graphmap::UnGraphMap, [INFO] [stdout] | ----^^^^^^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/graph/unitig.rs:247:5 [INFO] [stdout] | [INFO] [stdout] 247 | mut unitig_graph: petgraph::graphmap::UnGraphMap, [INFO] [stdout] | ----^^^^^^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variants `Kmer` and `Both` are never constructed [INFO] [stdout] --> src/graph/unitig.rs:32:5 [INFO] [stdout] | [INFO] [stdout] 31 | pub enum Edge { [INFO] [stdout] | ---- variants in this enum [INFO] [stdout] 32 | Kmer, [INFO] [stdout] | ^^^^ [INFO] [stdout] ... [INFO] [stdout] 35 | Both, [INFO] [stdout] | ^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `Edge` has derived impls for the traits `Clone` and `Debug`, but these are intentionally ignored during dead code analysis [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variants `Kmer` and `Both` are never constructed [INFO] [stdout] --> src/graph/unitig.rs:32:5 [INFO] [stdout] | [INFO] [stdout] 31 | pub enum Edge { [INFO] [stdout] | ---- variants in this enum [INFO] [stdout] 32 | Kmer, [INFO] [stdout] | ^^^^ [INFO] [stdout] ... [INFO] [stdout] 35 | Both, [INFO] [stdout] | ^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `Edge` has derived impls for the traits `Clone` and `Debug`, but these are intentionally ignored during dead code analysis [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 5 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 5 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 9.93s [INFO] running `Command { std: "docker" "inspect" "4823a5981e496ed2ecba711b502810722167b77d483193257abaf2ca02d75b0a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "4823a5981e496ed2ecba711b502810722167b77d483193257abaf2ca02d75b0a", kill_on_drop: false }` [INFO] [stdout] 4823a5981e496ed2ecba711b502810722167b77d483193257abaf2ca02d75b0a