[INFO] cloning repository https://github.com/jnalanko/sbwt-rs-cli [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/jnalanko/sbwt-rs-cli" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fjnalanko%2Fsbwt-rs-cli", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fjnalanko%2Fsbwt-rs-cli'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 21a8d80cdf8762e3582ab9f49774797c2972993f [INFO] checking jnalanko/sbwt-rs-cli against master#1f12b9b0fdbe735968ac002792a720f0ba4faca6 for crater-rollup-uwu [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fjnalanko%2Fsbwt-rs-cli" "/workspace/builds/worker-3-tc1/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-3-tc1/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/jnalanko/sbwt-rs-cli on toolchain 1f12b9b0fdbe735968ac002792a720f0ba4faca6 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1f12b9b0fdbe735968ac002792a720f0ba4faca6" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/jnalanko/sbwt-rs-cli [INFO] finished tweaking git repo https://github.com/jnalanko/sbwt-rs-cli [INFO] tweaked toml for git repo https://github.com/jnalanko/sbwt-rs-cli written to /workspace/builds/worker-3-tc1/source/Cargo.toml [INFO] crate git repo https://github.com/jnalanko/sbwt-rs-cli already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1f12b9b0fdbe735968ac002792a720f0ba4faca6" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded test-log v0.2.15 [INFO] [stderr] Downloaded read_exact v0.0.1 [INFO] [stderr] Downloaded unitig_flipper v0.1.0 [INFO] [stderr] Downloaded embed-doc-image v0.1.4 [INFO] [stderr] Downloaded simple-sds-sbwt v0.3.1 [INFO] [stderr] Downloaded test-log-macros v0.2.15 [INFO] [stderr] Downloaded ex v0.1.3 [INFO] [stderr] Downloaded jseqio v0.1.3 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:923055f121b5182466d55868a8b05e67af8ba4a3a3f6bad814e953ca3cd3ac2a" "/opt/rustwide/cargo-home/bin/cargo" "+1f12b9b0fdbe735968ac002792a720f0ba4faca6" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] ed66a452f1ba7d49a6ebe8a7a58a0f6903bf38e5688d7c8a2c40b661f3391dc2 [INFO] running `Command { std: "docker" "start" "-a" "ed66a452f1ba7d49a6ebe8a7a58a0f6903bf38e5688d7c8a2c40b661f3391dc2", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "ed66a452f1ba7d49a6ebe8a7a58a0f6903bf38e5688d7c8a2c40b661f3391dc2", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "ed66a452f1ba7d49a6ebe8a7a58a0f6903bf38e5688d7c8a2c40b661f3391dc2", kill_on_drop: false }` [INFO] [stdout] ed66a452f1ba7d49a6ebe8a7a58a0f6903bf38e5688d7c8a2c40b661f3391dc2 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:923055f121b5182466d55868a8b05e67af8ba4a3a3f6bad814e953ca3cd3ac2a" "/opt/rustwide/cargo-home/bin/cargo" "+1f12b9b0fdbe735968ac002792a720f0ba4faca6" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] c784c84294066d86fc5176413e1e27dd85361b4a08c598bdb6a775d518a27d53 [INFO] running `Command { std: "docker" "start" "-a" "c784c84294066d86fc5176413e1e27dd85361b4a08c598bdb6a775d518a27d53", kill_on_drop: false }` [INFO] [stderr] Compiling autocfg v1.2.0 [INFO] [stderr] Compiling libc v0.2.153 [INFO] [stderr] Compiling proc-macro2 v1.0.79 [INFO] [stderr] Compiling semver-parser v0.7.0 [INFO] [stderr] Compiling arrayvec v0.4.12 [INFO] [stderr] Checking utf8parse v0.2.1 [INFO] [stderr] Compiling crossbeam-utils v0.8.19 [INFO] [stderr] Checking crossbeam-utils v0.6.6 [INFO] [stderr] Checking anstyle-parse v0.2.3 [INFO] [stderr] Compiling semver v0.9.0 [INFO] [stderr] Checking memchr v2.7.2 [INFO] [stderr] Compiling getrandom v0.1.16 [INFO] [stderr] Checking nodrop v0.1.14 [INFO] [stderr] Compiling num-traits v0.2.18 [INFO] [stderr] Compiling memoffset v0.5.6 [INFO] [stderr] Checking rand_core v0.4.2 [INFO] [stderr] Compiling rustc_version v0.2.3 [INFO] [stderr] Compiling crc32fast v1.4.0 [INFO] [stderr] Checking anstyle v1.0.6 [INFO] [stderr] Checking colorchoice v1.0.0 [INFO] [stderr] Checking anstyle-query v1.0.2 [INFO] [stderr] Compiling parking_lot_core v0.3.1 [INFO] [stderr] Checking anstream v0.6.13 [INFO] [stderr] Checking rand_core v0.3.1 [INFO] [stderr] Compiling num-bigint v0.4.4 [INFO] [stderr] Compiling quote v1.0.35 [INFO] [stderr] Checking aho-corasick v1.1.3 [INFO] [stderr] Checking adler v1.0.2 [INFO] [stderr] Compiling syn v2.0.58 [INFO] [stderr] Checking regex-syntax v0.8.3 [INFO] [stderr] Checking getrandom v0.2.14 [INFO] [stderr] Compiling heck v0.5.0 [INFO] [stderr] Checking strsim v0.11.1 [INFO] [stderr] Checking stable_deref_trait v1.2.0 [INFO] [stderr] Checking clap_lex v0.7.0 [INFO] [stderr] Checking scopeguard v0.3.3 [INFO] [stderr] Checking owning_ref v0.4.1 [INFO] [stderr] Checking crossbeam-epoch v0.9.18 [INFO] [stderr] Checking rand_core v0.6.4 [INFO] [stderr] Checking clap_builder v4.5.2 [INFO] [stderr] Checking rand v0.5.6 [INFO] [stderr] Checking miniz_oxide v0.7.2 [INFO] [stderr] Checking smallvec v0.6.14 [INFO] [stderr] Compiling num-rational v0.4.1 [INFO] [stderr] Checking num-integer v0.1.46 [INFO] [stderr] Compiling radium v0.7.0 [INFO] [stderr] Compiling syn v1.0.109 [INFO] [stderr] Checking regex-automata v0.4.6 [INFO] [stderr] Compiling rayon-core v1.12.1 [INFO] [stderr] Checking quick-error v1.2.3 [INFO] [stderr] Checking ex v0.1.3 [INFO] [stderr] Checking crossbeam-epoch v0.7.2 [INFO] [stderr] Checking flate2 v1.0.28 [INFO] [stderr] Checking crossbeam-deque v0.8.5 [INFO] [stderr] Checking rand_core v0.5.1 [INFO] [stderr] Checking rand_chacha v0.3.1 [INFO] [stderr] Checking lock_api v0.1.5 [INFO] [stderr] Checking is-terminal v0.4.12 [INFO] [stderr] Checking env_filter v0.1.0 [INFO] [stderr] Checking termcolor v1.4.1 [INFO] [stderr] Checking memoffset v0.2.1 [INFO] [stderr] Checking tap v1.0.1 [INFO] [stderr] Checking humantime v2.1.0 [INFO] [stderr] Checking env_logger v0.11.3 [INFO] [stderr] Checking wyz v0.5.1 [INFO] [stderr] Checking parking_lot v0.6.4 [INFO] [stderr] Checking crossbeam-epoch v0.6.1 [INFO] [stderr] Checking jseqio v0.1.3 [INFO] [stderr] Checking rand_chacha v0.2.2 [INFO] [stderr] Checking rand v0.8.5 [INFO] [stderr] Checking crossbeam-deque v0.6.3 [INFO] [stderr] Checking num-iter v0.1.44 [INFO] [stderr] Checking num-complex v0.4.5 [INFO] [stderr] Checking num_cpus v1.16.0 [INFO] [stderr] Checking crossbeam-channel v0.3.9 [INFO] [stderr] Checking iana-time-zone v0.1.60 [INFO] [stderr] Compiling base64 v0.13.1 [INFO] [stderr] Checking funty v2.0.0 [INFO] [stderr] Checking either v1.10.0 [INFO] [stderr] Checking rayon v1.10.0 [INFO] [stderr] Checking crossbeam v0.5.0 [INFO] [stderr] Checking chrono v0.4.37 [INFO] [stderr] Checking num v0.4.1 [INFO] [stderr] Checking bitvec v1.0.1 [INFO] [stderr] Checking rand v0.7.3 [INFO] [stderr] Checking regex v1.10.4 [INFO] [stderr] Checking simple-sds-sbwt v0.3.1 [INFO] [stderr] Checking env_logger v0.10.2 [INFO] [stderr] Checking read_exact v0.0.1 [INFO] [stderr] Compiling clap_derive v4.5.4 [INFO] [stderr] Compiling test-log-macros v0.2.15 [INFO] [stderr] Checking test-log v0.2.15 [INFO] [stderr] Compiling embed-doc-image v0.1.4 [INFO] [stderr] Checking clap v4.5.4 [INFO] [stderr] Checking clap_complete v4.5.1 [INFO] [stderr] Checking unitig_flipper v0.1.0 [INFO] [stderr] Checking sbwt v0.3.1 (/opt/rustwide/workdir/api) [INFO] [stdout] warning: struct `NullReader` is never constructed [INFO] [stdout] --> api/src/bitpacked_kmer_sorting/dummies.rs:8:8 [INFO] [stdout] | [INFO] [stdout] 8 | struct NullReader{} [INFO] [stdout] | ^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field `0` is never read [INFO] [stdout] --> api/src/bitpacked_kmer_sorting/kmer.rs:10:23 [INFO] [stdout] | [INFO] [stdout] 10 | InvalidNucleotide(char), // contains the offending char [INFO] [stdout] | ----------------- ^^^^ [INFO] [stdout] | | [INFO] [stdout] | field in this variant [INFO] [stdout] | [INFO] [stdout] = note: `KmerEncodingError` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stdout] help: consider changing the field to be of unit type to suppress this warning while preserving the field numbering, or remove the field [INFO] [stdout] | [INFO] [stdout] 10 | InvalidNucleotide(()), // contains the offending char [INFO] [stdout] | ~~ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field `0` is never read [INFO] [stdout] --> api/src/bitpacked_kmer_sorting/kmer.rs:11:13 [INFO] [stdout] | [INFO] [stdout] 11 | TooLong(usize), // Contains the length of the k-mer which was too long [INFO] [stdout] | ------- ^^^^^ [INFO] [stdout] | | [INFO] [stdout] | field in this variant [INFO] [stdout] | [INFO] [stdout] = note: `KmerEncodingError` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stdout] help: consider changing the field to be of unit type to suppress this warning while preserving the field numbering, or remove the field [INFO] [stdout] | [INFO] [stdout] 11 | TooLong(()), // Contains the length of the k-mer which was too long [INFO] [stdout] | ~~ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: struct `FastXReader` is never constructed [INFO] [stdout] --> api/src/util.rs:70:19 [INFO] [stdout] | [INFO] [stdout] 70 | pub(crate) struct FastXReader{ [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 4 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Checking sbwt-cli v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: struct `NullReader` is never constructed [INFO] [stdout] --> api/src/bitpacked_kmer_sorting/dummies.rs:8:8 [INFO] [stdout] | [INFO] [stdout] 8 | struct NullReader{} [INFO] [stdout] | ^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field `0` is never read [INFO] [stdout] --> api/src/bitpacked_kmer_sorting/kmer.rs:10:23 [INFO] [stdout] | [INFO] [stdout] 10 | InvalidNucleotide(char), // contains the offending char [INFO] [stdout] | ----------------- ^^^^ [INFO] [stdout] | | [INFO] [stdout] | field in this variant [INFO] [stdout] | [INFO] [stdout] = note: `KmerEncodingError` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stdout] help: consider changing the field to be of unit type to suppress this warning while preserving the field numbering, or remove the field [INFO] [stdout] | [INFO] [stdout] 10 | InvalidNucleotide(()), // contains the offending char [INFO] [stdout] | ~~ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field `0` is never read [INFO] [stdout] --> api/src/bitpacked_kmer_sorting/kmer.rs:11:13 [INFO] [stdout] | [INFO] [stdout] 11 | TooLong(usize), // Contains the length of the k-mer which was too long [INFO] [stdout] | ------- ^^^^^ [INFO] [stdout] | | [INFO] [stdout] | field in this variant [INFO] [stdout] | [INFO] [stdout] = note: `KmerEncodingError` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stdout] help: consider changing the field to be of unit type to suppress this warning while preserving the field numbering, or remove the field [INFO] [stdout] | [INFO] [stdout] 11 | TooLong(()), // Contains the length of the k-mer which was too long [INFO] [stdout] | ~~ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: struct `FastXReader` is never constructed [INFO] [stdout] --> api/src/util.rs:70:19 [INFO] [stdout] | [INFO] [stdout] 70 | pub(crate) struct FastXReader{ [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 4 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 7.48s [INFO] running `Command { std: "docker" "inspect" "c784c84294066d86fc5176413e1e27dd85361b4a08c598bdb6a775d518a27d53", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "c784c84294066d86fc5176413e1e27dd85361b4a08c598bdb6a775d518a27d53", kill_on_drop: false }` [INFO] [stdout] c784c84294066d86fc5176413e1e27dd85361b4a08c598bdb6a775d518a27d53