[INFO] crate bdb 0.0.1 is already in cache [INFO] extracting crate bdb 0.0.1 into work/ex/clippy-test-run/sources/stable/reg/bdb/0.0.1 [INFO] extracting crate bdb 0.0.1 into work/ex/clippy-test-run/sources/stable+rustflags=-Dclippy%3A%3Ainto_iter_on_array/reg/bdb/0.0.1 [INFO] validating manifest of bdb-0.0.1 on toolchain stable [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+stable" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] validating manifest of bdb-0.0.1 on toolchain stable+rustflags=-Dclippy::into_iter_on_array [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+stable" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started frobbing bdb-0.0.1 [INFO] finished frobbing bdb-0.0.1 [INFO] frobbed toml for bdb-0.0.1 written to work/ex/clippy-test-run/sources/stable/reg/bdb/0.0.1/Cargo.toml [INFO] started frobbing bdb-0.0.1 [INFO] finished frobbing bdb-0.0.1 [INFO] frobbed toml for bdb-0.0.1 written to work/ex/clippy-test-run/sources/stable+rustflags=-Dclippy%3A%3Ainto_iter_on_array/reg/bdb/0.0.1/Cargo.toml [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+stable" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update"` [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+stable" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update"` [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+stable" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+stable" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] linting bdb-0.0.1 against stable for clippy-test-run [INFO] running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/clippy-test-run/worker-1/stable:/opt/crater/target:rw,Z" "-v" "/mnt/big/crater/work/ex/clippy-test-run/sources/stable/reg/bdb/0.0.1:/opt/crater/workdir:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/opt/crater/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/opt/crater/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/opt/crater/workdir" "-e" "MAP_USER_ID=1000" "-e" "CARGO_TARGET_DIR=/opt/crater/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/crater/cargo-home" "-e" "RUSTUP_HOME=/opt/crater/rustup-home" "-w" "/opt/crater/workdir" "-m" "1536M" "--network" "none" "rustops/crates-build-env" "/opt/crater/cargo-home/bin/cargo" "+stable" "clippy" "--frozen" "--all" "--all-targets"` [INFO] [stdout] d1162e66e3b2cb2966a80adc69e67ab74526165ec6d9acb278a6f16daba02578 [INFO] running `"docker" "start" "-a" "d1162e66e3b2cb2966a80adc69e67ab74526165ec6d9acb278a6f16daba02578"` [INFO] [stderr] Checking numpress v1.1.0 [INFO] [stderr] Checking digit_group v0.1.0 [INFO] [stderr] Compiling native-tls v0.2.2 [INFO] [stderr] Checking quick-xml v0.12.4 [INFO] [stderr] Checking hyper-tls v0.3.1 [INFO] [stderr] Checking reqwest v0.9.9 [INFO] [stderr] Checking bdb v0.0.1 (/opt/crater/workdir) [INFO] [stderr] warning: redundant field names in struct initialization [INFO] [stderr] --> src/util/iterator.rs:23:13 [INFO] [stderr] | [INFO] [stderr] 23 | iter: iter [INFO] [stderr] | ^^^^^^^^^^ help: replace it with: `iter` [INFO] [stderr] | [INFO] [stderr] = note: #[warn(clippy::redundant_field_names)] on by default [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#redundant_field_names [INFO] [stderr] [INFO] [stderr] warning: redundant field names in struct initialization [INFO] [stderr] --> src/util/iterator.rs:52:13 [INFO] [stderr] | [INFO] [stderr] 52 | iter: iter [INFO] [stderr] | ^^^^^^^^^^ help: replace it with: `iter` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#redundant_field_names [INFO] [stderr] [INFO] [stderr] warning: redundant field names in struct initialization [INFO] [stderr] --> src/util/writer.rs:22:13 [INFO] [stderr] | [INFO] [stderr] 22 | writer: writer, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: replace it with: `writer` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#redundant_field_names [INFO] [stderr] [INFO] [stderr] warning: redundant field names in struct initialization [INFO] [stderr] --> src/util/writer.rs:24:13 [INFO] [stderr] | [INFO] [stderr] 24 | delimiter: delimiter, [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^ help: replace it with: `delimiter` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#redundant_field_names [INFO] [stderr] [INFO] [stderr] warning: redundant field names in struct initialization [INFO] [stderr] --> src/util/xml.rs:60:13 [INFO] [stderr] | [INFO] [stderr] 60 | reader: reader, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: replace it with: `reader` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#redundant_field_names [INFO] [stderr] [INFO] [stderr] warning: redundant field names in struct initialization [INFO] [stderr] --> src/db/sra/fastq.rs:28:13 [INFO] [stderr] | [INFO] [stderr] 28 | reader: reader, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: replace it with: `reader` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#redundant_field_names [INFO] [stderr] [INFO] [stderr] warning: redundant field names in struct initialization [INFO] [stderr] --> src/db/uniprot/fasta.rs:30:13 [INFO] [stderr] | [INFO] [stderr] 30 | reader: reader, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: replace it with: `reader` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#redundant_field_names [INFO] [stderr] [INFO] [stderr] warning: redundant field names in struct initialization [INFO] [stderr] --> src/util/iterator.rs:23:13 [INFO] [stderr] | [INFO] [stderr] 23 | iter: iter [INFO] [stderr] | ^^^^^^^^^^ help: replace it with: `iter` [INFO] [stderr] | [INFO] [stderr] = note: #[warn(clippy::redundant_field_names)] on by default [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#redundant_field_names [INFO] [stderr] [INFO] [stderr] warning: redundant field names in struct initialization [INFO] [stderr] --> src/util/iterator.rs:52:13 [INFO] [stderr] | [INFO] [stderr] 52 | iter: iter [INFO] [stderr] | ^^^^^^^^^^ help: replace it with: `iter` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#redundant_field_names [INFO] [stderr] [INFO] [stderr] warning: redundant field names in struct initialization [INFO] [stderr] --> src/util/writer.rs:22:13 [INFO] [stderr] | [INFO] [stderr] 22 | writer: writer, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: replace it with: `writer` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#redundant_field_names [INFO] [stderr] [INFO] [stderr] warning: redundant field names in struct initialization [INFO] [stderr] --> src/util/writer.rs:24:13 [INFO] [stderr] | [INFO] [stderr] 24 | delimiter: delimiter, [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^ help: replace it with: `delimiter` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#redundant_field_names [INFO] [stderr] [INFO] [stderr] warning: redundant field names in struct initialization [INFO] [stderr] --> src/util/xml.rs:60:13 [INFO] [stderr] | [INFO] [stderr] 60 | reader: reader, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: replace it with: `reader` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#redundant_field_names [INFO] [stderr] [INFO] [stderr] warning: redundant field names in struct initialization [INFO] [stderr] --> src/db/sra/fastq.rs:28:13 [INFO] [stderr] | [INFO] [stderr] 28 | reader: reader, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: replace it with: `reader` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#redundant_field_names [INFO] [stderr] [INFO] [stderr] warning: redundant field names in struct initialization [INFO] [stderr] --> src/db/uniprot/fasta.rs:30:13 [INFO] [stderr] | [INFO] [stderr] 30 | reader: reader, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: replace it with: `reader` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#redundant_field_names [INFO] [stderr] [INFO] [stderr] warning: All the struct fields are matched to a wildcard pattern, consider using `..`. [INFO] [stderr] --> src/util/error.rs:154:17 [INFO] [stderr] | [INFO] [stderr] 154 | XmlError::EndEventMismatch {expected: _, found: _} => "xml: end event mismatch", [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: #[warn(clippy::unneeded_field_pattern)] on by default [INFO] [stderr] = help: Try with `EndEventMismatch { .. }` instead [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unneeded_field_pattern [INFO] [stderr] [INFO] [stderr] warning: unneeded return statement [INFO] [stderr] --> src/util/xml.rs:143:9 [INFO] [stderr] | [INFO] [stderr] 143 | return depth == usize::max_value() || self.depth() == depth; [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ help: remove `return` as shown: `depth == usize::max_value() || self.depth() == depth` [INFO] [stderr] | [INFO] [stderr] = note: #[warn(clippy::needless_return)] on by default [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#needless_return [INFO] [stderr] [INFO] [stderr] warning: unneeded return statement [INFO] [stderr] --> src/util/xml.rs:149:9 [INFO] [stderr] | [INFO] [stderr] 149 | return expected == b"" || actual == expected; [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ help: remove `return` as shown: `expected == b"" || actual == expected` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#needless_return [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:51:9 [INFO] [stderr] | [INFO] [stderr] 51 | 18.0105646942 [INFO] [stderr] | ^^^^^^^^^^^^^ help: consider: `18.010_564_694_2` [INFO] [stderr] | [INFO] [stderr] = note: #[warn(clippy::unreadable_literal)] on by default [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:58:21 [INFO] [stderr] | [INFO] [stderr] 58 | b'A' => 71.0371137957, [INFO] [stderr] | ^^^^^^^^^^^^^ help: consider: `71.037_113_795_7` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:59:21 [INFO] [stderr] | [INFO] [stderr] 59 | b'C' => 103.0091844957, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `103.009_184_495_7` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:60:21 [INFO] [stderr] | [INFO] [stderr] 60 | b'D' => 115.0269430557, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `115.026_943_055_7` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:61:21 [INFO] [stderr] | [INFO] [stderr] 61 | b'E' => 129.0425931199, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `129.042_593_119_9` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:62:21 [INFO] [stderr] | [INFO] [stderr] 62 | b'F' => 147.0684139241, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `147.068_413_924_1` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:63:21 [INFO] [stderr] | [INFO] [stderr] 63 | b'G' => 57.0214637315, [INFO] [stderr] | ^^^^^^^^^^^^^ help: consider: `57.021_463_731_5` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:64:21 [INFO] [stderr] | [INFO] [stderr] 64 | b'H' => 137.0589118703, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `137.058_911_870_3` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:65:21 [INFO] [stderr] | [INFO] [stderr] 65 | b'I' => 113.0840639883, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `113.084_063_988_3` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:66:21 [INFO] [stderr] | [INFO] [stderr] 66 | b'K' => 128.0949630256, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `128.094_963_025_6` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:67:21 [INFO] [stderr] | [INFO] [stderr] 67 | b'L' => 113.0840639883, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `113.084_063_988_3` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:68:21 [INFO] [stderr] | [INFO] [stderr] 68 | b'M' => 131.0404846241, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `131.040_484_624_1` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:69:21 [INFO] [stderr] | [INFO] [stderr] 69 | b'N' => 114.042927463, [INFO] [stderr] | ^^^^^^^^^^^^^ help: consider: `114.042_927_463` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:70:21 [INFO] [stderr] | [INFO] [stderr] 70 | b'P' => 97.0527638599, [INFO] [stderr] | ^^^^^^^^^^^^^ help: consider: `97.052_763_859_9` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:71:21 [INFO] [stderr] | [INFO] [stderr] 71 | b'Q' => 128.0585775272, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `128.058_577_527_2` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:72:21 [INFO] [stderr] | [INFO] [stderr] 72 | b'R' => 156.101111036, [INFO] [stderr] | ^^^^^^^^^^^^^ help: consider: `156.101_111_036` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:73:21 [INFO] [stderr] | [INFO] [stderr] 73 | b'S' => 87.0320284257, [INFO] [stderr] | ^^^^^^^^^^^^^ help: consider: `87.032_028_425_7` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:74:21 [INFO] [stderr] | [INFO] [stderr] 74 | b'T' => 101.0476784899, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `101.047_678_489_9` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:75:21 [INFO] [stderr] | [INFO] [stderr] 75 | b'U' => 150.9536347957, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `150.953_634_795_7` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:76:21 [INFO] [stderr] | [INFO] [stderr] 76 | b'V' => 99.0684139241, [INFO] [stderr] | ^^^^^^^^^^^^^ help: consider: `99.068_413_924_1` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:77:21 [INFO] [stderr] | [INFO] [stderr] 77 | b'W' => 186.0793129614, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `186.079_312_961_4` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:78:21 [INFO] [stderr] | [INFO] [stderr] 78 | b'Y' => 163.0633285541, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `163.063_328_554_1` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:80:21 [INFO] [stderr] | [INFO] [stderr] 80 | b'a' => 71.0371137957, [INFO] [stderr] | ^^^^^^^^^^^^^ help: consider: `71.037_113_795_7` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:81:21 [INFO] [stderr] | [INFO] [stderr] 81 | b'c' => 103.0091844957, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `103.009_184_495_7` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:82:21 [INFO] [stderr] | [INFO] [stderr] 82 | b'd' => 115.0269430557, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `115.026_943_055_7` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:83:21 [INFO] [stderr] | [INFO] [stderr] 83 | b'e' => 129.0425931199, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `129.042_593_119_9` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:84:21 [INFO] [stderr] | [INFO] [stderr] 84 | b'f' => 147.0684139241, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `147.068_413_924_1` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:85:21 [INFO] [stderr] | [INFO] [stderr] 85 | b'g' => 57.0214637315, [INFO] [stderr] | ^^^^^^^^^^^^^ help: consider: `57.021_463_731_5` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:86:21 [INFO] [stderr] | [INFO] [stderr] 86 | b'h' => 137.0589118703, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `137.058_911_870_3` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:87:21 [INFO] [stderr] | [INFO] [stderr] 87 | b'i' => 113.0840639883, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `113.084_063_988_3` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:88:21 [INFO] [stderr] | [INFO] [stderr] 88 | b'k' => 128.0949630256, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `128.094_963_025_6` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:89:21 [INFO] [stderr] | [INFO] [stderr] 89 | b'l' => 113.0840639883, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `113.084_063_988_3` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:90:21 [INFO] [stderr] | [INFO] [stderr] 90 | b'm' => 131.0404846241, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `131.040_484_624_1` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:91:21 [INFO] [stderr] | [INFO] [stderr] 91 | b'n' => 114.042927463, [INFO] [stderr] | ^^^^^^^^^^^^^ help: consider: `114.042_927_463` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:92:21 [INFO] [stderr] | [INFO] [stderr] 92 | b'p' => 97.0527638599, [INFO] [stderr] | ^^^^^^^^^^^^^ help: consider: `97.052_763_859_9` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:93:21 [INFO] [stderr] | [INFO] [stderr] 93 | b'q' => 128.0585775272, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `128.058_577_527_2` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:94:21 [INFO] [stderr] | [INFO] [stderr] 94 | b'r' => 156.101111036, [INFO] [stderr] | ^^^^^^^^^^^^^ help: consider: `156.101_111_036` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:95:21 [INFO] [stderr] | [INFO] [stderr] 95 | b's' => 87.0320284257, [INFO] [stderr] | ^^^^^^^^^^^^^ help: consider: `87.032_028_425_7` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:96:21 [INFO] [stderr] | [INFO] [stderr] 96 | b't' => 101.0476784899, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `101.047_678_489_9` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:97:21 [INFO] [stderr] | [INFO] [stderr] 97 | b'u' => 150.9536347957, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `150.953_634_795_7` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:98:21 [INFO] [stderr] | [INFO] [stderr] 98 | b'v' => 99.0684139241, [INFO] [stderr] | ^^^^^^^^^^^^^ help: consider: `99.068_413_924_1` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:99:21 [INFO] [stderr] | [INFO] [stderr] 99 | b'w' => 186.0793129614, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `186.079_312_961_4` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:100:21 [INFO] [stderr] | [INFO] [stderr] 100 | b'y' => 163.0633285541, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `163.063_328_554_1` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: Constants have by default a `'static` lifetime [INFO] [stderr] --> src/db/uniprot/csv.rs:18:26 [INFO] [stderr] | [INFO] [stderr] 18 | const SEQUENCE_VERSION: &'static str = "Version (sequence)"; [INFO] [stderr] | -^^^^^^^---- help: consider removing `'static`: `&str` [INFO] [stderr] | [INFO] [stderr] = note: #[warn(clippy::const_static_lifetime)] on by default [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#const_static_lifetime [INFO] [stderr] [INFO] [stderr] warning: Constants have by default a `'static` lifetime [INFO] [stderr] --> src/db/uniprot/csv.rs:21:26 [INFO] [stderr] | [INFO] [stderr] 21 | const PROTEIN_EVIDENCE: &'static str = "Protein existence"; [INFO] [stderr] | -^^^^^^^---- help: consider removing `'static`: `&str` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#const_static_lifetime [INFO] [stderr] [INFO] [stderr] warning: Constants have by default a `'static` lifetime [INFO] [stderr] --> src/db/uniprot/csv.rs:24:14 [INFO] [stderr] | [INFO] [stderr] 24 | const MASS: &'static str = "Mass"; [INFO] [stderr] | -^^^^^^^---- help: consider removing `'static`: `&str` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#const_static_lifetime [INFO] [stderr] [INFO] [stderr] warning: Constants have by default a `'static` lifetime [INFO] [stderr] --> src/db/uniprot/csv.rs:27:16 [INFO] [stderr] | [INFO] [stderr] 27 | const LENGTH: &'static str = "Length"; [INFO] [stderr] | -^^^^^^^---- help: consider removing `'static`: `&str` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#const_static_lifetime [INFO] [stderr] [INFO] [stderr] warning: Constants have by default a `'static` lifetime [INFO] [stderr] --> src/db/uniprot/csv.rs:30:14 [INFO] [stderr] | [INFO] [stderr] 30 | const GENE: &'static str = "Gene names (primary )"; [INFO] [stderr] | -^^^^^^^---- help: consider removing `'static`: `&str` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#const_static_lifetime [INFO] [stderr] [INFO] [stderr] warning: Constants have by default a `'static` lifetime [INFO] [stderr] --> src/db/uniprot/csv.rs:33:12 [INFO] [stderr] | [INFO] [stderr] 33 | const ID: &'static str = "Entry"; [INFO] [stderr] | -^^^^^^^---- help: consider removing `'static`: `&str` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#const_static_lifetime [INFO] [stderr] [INFO] [stderr] warning: Constants have by default a `'static` lifetime [INFO] [stderr] --> src/db/uniprot/csv.rs:36:18 [INFO] [stderr] | [INFO] [stderr] 36 | const MNEMONIC: &'static str = "Entry name"; [INFO] [stderr] | -^^^^^^^---- help: consider removing `'static`: `&str` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#const_static_lifetime [INFO] [stderr] [INFO] [stderr] warning: Constants have by default a `'static` lifetime [INFO] [stderr] --> src/db/uniprot/csv.rs:39:14 [INFO] [stderr] | [INFO] [stderr] 39 | const NAME: &'static str = "Protein names"; [INFO] [stderr] | -^^^^^^^---- help: consider removing `'static`: `&str` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#const_static_lifetime [INFO] [stderr] [INFO] [stderr] warning: Constants have by default a `'static` lifetime [INFO] [stderr] --> src/db/uniprot/csv.rs:42:18 [INFO] [stderr] | [INFO] [stderr] 42 | const ORGANISM: &'static str = "Organism"; [INFO] [stderr] | -^^^^^^^---- help: consider removing `'static`: `&str` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#const_static_lifetime [INFO] [stderr] [INFO] [stderr] warning: Constants have by default a `'static` lifetime [INFO] [stderr] --> src/db/uniprot/csv.rs:45:18 [INFO] [stderr] | [INFO] [stderr] 45 | const PROTEOME: &'static str = "Proteomes"; [INFO] [stderr] | -^^^^^^^---- help: consider removing `'static`: `&str` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#const_static_lifetime [INFO] [stderr] [INFO] [stderr] warning: Constants have by default a `'static` lifetime [INFO] [stderr] --> src/db/uniprot/csv.rs:48:18 [INFO] [stderr] | [INFO] [stderr] 48 | const SEQUENCE: &'static str = "Sequence"; [INFO] [stderr] | -^^^^^^^---- help: consider removing `'static`: `&str` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#const_static_lifetime [INFO] [stderr] [INFO] [stderr] warning: Constants have by default a `'static` lifetime [INFO] [stderr] --> src/db/uniprot/csv.rs:51:18 [INFO] [stderr] | [INFO] [stderr] 51 | const TAXONOMY: &'static str = "Organism ID"; [INFO] [stderr] | -^^^^^^^---- help: consider removing `'static`: `&str` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#const_static_lifetime [INFO] [stderr] [INFO] [stderr] warning: Constants have by default a `'static` lifetime [INFO] [stderr] --> src/db/uniprot/csv.rs:54:18 [INFO] [stderr] | [INFO] [stderr] 54 | const REVIEWED: &'static str = "Status"; [INFO] [stderr] | -^^^^^^^---- help: consider removing `'static`: `&str` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#const_static_lifetime [INFO] [stderr] [INFO] [stderr] warning: Constants have by default a `'static` lifetime [INFO] [stderr] --> src/db/uniprot/csv.rs:59:21 [INFO] [stderr] | [INFO] [stderr] 59 | const CSV_HEADER: [&'static str; 13] = [ [INFO] [stderr] | -^^^^^^^---- help: consider removing `'static`: `&str` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#const_static_lifetime [INFO] [stderr] [INFO] [stderr] warning: All the struct fields are matched to a wildcard pattern, consider using `..`. [INFO] [stderr] --> src/util/error.rs:154:17 [INFO] [stderr] | [INFO] [stderr] 154 | XmlError::EndEventMismatch {expected: _, found: _} => "xml: end event mismatch", [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: #[warn(clippy::unneeded_field_pattern)] on by default [INFO] [stderr] = help: Try with `EndEventMismatch { .. }` instead [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unneeded_field_pattern [INFO] [stderr] [INFO] [stderr] warning: unneeded return statement [INFO] [stderr] --> src/util/xml.rs:143:9 [INFO] [stderr] | [INFO] [stderr] 143 | return depth == usize::max_value() || self.depth() == depth; [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ help: remove `return` as shown: `depth == usize::max_value() || self.depth() == depth` [INFO] [stderr] | [INFO] [stderr] = note: #[warn(clippy::needless_return)] on by default [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#needless_return [INFO] [stderr] [INFO] [stderr] warning: unneeded return statement [INFO] [stderr] --> src/util/xml.rs:149:9 [INFO] [stderr] | [INFO] [stderr] 149 | return expected == b"" || actual == expected; [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ help: remove `return` as shown: `expected == b"" || actual == expected` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#needless_return [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:51:9 [INFO] [stderr] | [INFO] [stderr] 51 | 18.0105646942 [INFO] [stderr] | ^^^^^^^^^^^^^ help: consider: `18.010_564_694_2` [INFO] [stderr] | [INFO] [stderr] = note: #[warn(clippy::unreadable_literal)] on by default [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:58:21 [INFO] [stderr] | [INFO] [stderr] 58 | b'A' => 71.0371137957, [INFO] [stderr] | ^^^^^^^^^^^^^ help: consider: `71.037_113_795_7` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:59:21 [INFO] [stderr] | [INFO] [stderr] 59 | b'C' => 103.0091844957, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `103.009_184_495_7` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:60:21 [INFO] [stderr] | [INFO] [stderr] 60 | b'D' => 115.0269430557, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `115.026_943_055_7` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:61:21 [INFO] [stderr] | [INFO] [stderr] 61 | b'E' => 129.0425931199, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `129.042_593_119_9` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:62:21 [INFO] [stderr] | [INFO] [stderr] 62 | b'F' => 147.0684139241, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `147.068_413_924_1` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:63:21 [INFO] [stderr] | [INFO] [stderr] 63 | b'G' => 57.0214637315, [INFO] [stderr] | ^^^^^^^^^^^^^ help: consider: `57.021_463_731_5` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:64:21 [INFO] [stderr] | [INFO] [stderr] 64 | b'H' => 137.0589118703, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `137.058_911_870_3` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:65:21 [INFO] [stderr] | [INFO] [stderr] 65 | b'I' => 113.0840639883, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `113.084_063_988_3` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:66:21 [INFO] [stderr] | [INFO] [stderr] 66 | b'K' => 128.0949630256, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `128.094_963_025_6` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:67:21 [INFO] [stderr] | [INFO] [stderr] 67 | b'L' => 113.0840639883, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `113.084_063_988_3` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:68:21 [INFO] [stderr] | [INFO] [stderr] 68 | b'M' => 131.0404846241, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `131.040_484_624_1` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:69:21 [INFO] [stderr] | [INFO] [stderr] 69 | b'N' => 114.042927463, [INFO] [stderr] | ^^^^^^^^^^^^^ help: consider: `114.042_927_463` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:70:21 [INFO] [stderr] | [INFO] [stderr] 70 | b'P' => 97.0527638599, [INFO] [stderr] | ^^^^^^^^^^^^^ help: consider: `97.052_763_859_9` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:71:21 [INFO] [stderr] | [INFO] [stderr] 71 | b'Q' => 128.0585775272, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `128.058_577_527_2` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:72:21 [INFO] [stderr] | [INFO] [stderr] 72 | b'R' => 156.101111036, [INFO] [stderr] | ^^^^^^^^^^^^^ help: consider: `156.101_111_036` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:73:21 [INFO] [stderr] | [INFO] [stderr] 73 | b'S' => 87.0320284257, [INFO] [stderr] | ^^^^^^^^^^^^^ help: consider: `87.032_028_425_7` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:74:21 [INFO] [stderr] | [INFO] [stderr] 74 | b'T' => 101.0476784899, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `101.047_678_489_9` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:75:21 [INFO] [stderr] | [INFO] [stderr] 75 | b'U' => 150.9536347957, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `150.953_634_795_7` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:76:21 [INFO] [stderr] | [INFO] [stderr] 76 | b'V' => 99.0684139241, [INFO] [stderr] | ^^^^^^^^^^^^^ help: consider: `99.068_413_924_1` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:77:21 [INFO] [stderr] | [INFO] [stderr] 77 | b'W' => 186.0793129614, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `186.079_312_961_4` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:78:21 [INFO] [stderr] | [INFO] [stderr] 78 | b'Y' => 163.0633285541, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `163.063_328_554_1` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:80:21 [INFO] [stderr] | [INFO] [stderr] 80 | b'a' => 71.0371137957, [INFO] [stderr] | ^^^^^^^^^^^^^ help: consider: `71.037_113_795_7` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:81:21 [INFO] [stderr] | [INFO] [stderr] 81 | b'c' => 103.0091844957, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `103.009_184_495_7` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:82:21 [INFO] [stderr] | [INFO] [stderr] 82 | b'd' => 115.0269430557, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `115.026_943_055_7` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:83:21 [INFO] [stderr] | [INFO] [stderr] 83 | b'e' => 129.0425931199, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `129.042_593_119_9` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:84:21 [INFO] [stderr] | [INFO] [stderr] 84 | b'f' => 147.0684139241, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `147.068_413_924_1` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:85:21 [INFO] [stderr] | [INFO] [stderr] 85 | b'g' => 57.0214637315, [INFO] [stderr] | ^^^^^^^^^^^^^ help: consider: `57.021_463_731_5` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:86:21 [INFO] [stderr] | [INFO] [stderr] 86 | b'h' => 137.0589118703, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `137.058_911_870_3` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:87:21 [INFO] [stderr] | [INFO] [stderr] 87 | b'i' => 113.0840639883, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `113.084_063_988_3` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:88:21 [INFO] [stderr] | [INFO] [stderr] 88 | b'k' => 128.0949630256, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `128.094_963_025_6` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:89:21 [INFO] [stderr] | [INFO] [stderr] 89 | b'l' => 113.0840639883, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `113.084_063_988_3` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:90:21 [INFO] [stderr] | [INFO] [stderr] 90 | b'm' => 131.0404846241, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `131.040_484_624_1` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:91:21 [INFO] [stderr] | [INFO] [stderr] 91 | b'n' => 114.042927463, [INFO] [stderr] | ^^^^^^^^^^^^^ help: consider: `114.042_927_463` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:92:21 [INFO] [stderr] | [INFO] [stderr] 92 | b'p' => 97.0527638599, [INFO] [stderr] | ^^^^^^^^^^^^^ help: consider: `97.052_763_859_9` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:93:21 [INFO] [stderr] | [INFO] [stderr] 93 | b'q' => 128.0585775272, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `128.058_577_527_2` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:94:21 [INFO] [stderr] | [INFO] [stderr] 94 | b'r' => 156.101111036, [INFO] [stderr] | ^^^^^^^^^^^^^ help: consider: `156.101_111_036` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:95:21 [INFO] [stderr] | [INFO] [stderr] 95 | b's' => 87.0320284257, [INFO] [stderr] | ^^^^^^^^^^^^^ help: consider: `87.032_028_425_7` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:96:21 [INFO] [stderr] | [INFO] [stderr] 96 | b't' => 101.0476784899, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `101.047_678_489_9` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:97:21 [INFO] [stderr] | [INFO] [stderr] 97 | b'u' => 150.9536347957, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `150.953_634_795_7` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:98:21 [INFO] [stderr] | [INFO] [stderr] 98 | b'v' => 99.0684139241, [INFO] [stderr] | ^^^^^^^^^^^^^ help: consider: `99.068_413_924_1` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:99:21 [INFO] [stderr] | [INFO] [stderr] 99 | b'w' => 186.0793129614, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `186.079_312_961_4` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:100:21 [INFO] [stderr] | [INFO] [stderr] 100 | b'y' => 163.0633285541, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `163.063_328_554_1` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:241:63 [INFO] [stderr] | [INFO] [stderr] 241 | assert_approx_eq!(T::internal_sequence_mass(peptide), 2527.067977, 0.001); [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `2_527.067_977` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/bio/proteins.rs:242:63 [INFO] [stderr] | [INFO] [stderr] 242 | assert_approx_eq!(T::protein_sequence_mass(peptide), 2545.0785414, 0.001); [INFO] [stderr] | ^^^^^^^^^^^^ help: consider: `2_545.078_541_4` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:15:27 [INFO] [stderr] | [INFO] [stderr] 15 | parent_intensity: 170643.953125, [INFO] [stderr] | ^^^^^^^^^^^^^ help: consider: `170_643.953_125` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:20:24 [INFO] [stderr] | [INFO] [stderr] 20 | Peak { mz: 205.9304178, intensity: 0.0, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `205.930_417_8` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:21:24 [INFO] [stderr] | [INFO] [stderr] 21 | Peak { mz: 205.9320046, intensity: 0.0, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `205.932_004_6` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:22:24 [INFO] [stderr] | [INFO] [stderr] 22 | Peak { mz: 205.9335913, intensity: 0.0, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `205.933_591_3` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:23:24 [INFO] [stderr] | [INFO] [stderr] 23 | Peak { mz: 205.9351781, intensity: 0.0, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `205.935_178_1` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:24:24 [INFO] [stderr] | [INFO] [stderr] 24 | Peak { mz: 257.514984, intensity: 0.0, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^ help: consider: `257.514_984` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:25:24 [INFO] [stderr] | [INFO] [stderr] 25 | Peak { mz: 257.5172029, intensity: 0.0, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `257.517_202_9` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:26:24 [INFO] [stderr] | [INFO] [stderr] 26 | Peak { mz: 257.5194218, intensity: 0.0, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `257.519_421_8` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:27:24 [INFO] [stderr] | [INFO] [stderr] 27 | Peak { mz: 257.5216407, intensity: 0.0, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `257.521_640_7` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:28:24 [INFO] [stderr] | [INFO] [stderr] 28 | Peak { mz: 257.5238596, intensity: 457.499206543, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `257.523_859_6` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:28:48 [INFO] [stderr] | [INFO] [stderr] 28 | Peak { mz: 257.5238596, intensity: 457.499206543, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^^^ help: consider: `457.499_206_543` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:29:24 [INFO] [stderr] | [INFO] [stderr] 29 | Peak { mz: 257.5260786, intensity: 742.1607666016, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `257.526_078_6` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:29:48 [INFO] [stderr] | [INFO] [stderr] 29 | Peak { mz: 257.5260786, intensity: 742.1607666016, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `742.160_766_601_6` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:30:24 [INFO] [stderr] | [INFO] [stderr] 30 | Peak { mz: 257.5282976, intensity: 832.3284301758, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `257.528_297_6` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:30:48 [INFO] [stderr] | [INFO] [stderr] 30 | Peak { mz: 257.5282976, intensity: 832.3284301758, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `832.328_430_175_8` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:31:24 [INFO] [stderr] | [INFO] [stderr] 31 | Peak { mz: 257.5305166, intensity: 666.099609375, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `257.530_516_6` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:31:48 [INFO] [stderr] | [INFO] [stderr] 31 | Peak { mz: 257.5305166, intensity: 666.099609375, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^^^ help: consider: `666.099_609_375` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:32:24 [INFO] [stderr] | [INFO] [stderr] 32 | Peak { mz: 257.5327357, intensity: 353.6197509766, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `257.532_735_7` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:32:48 [INFO] [stderr] | [INFO] [stderr] 32 | Peak { mz: 257.5327357, intensity: 353.6197509766, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `353.619_750_976_6` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:33:24 [INFO] [stderr] | [INFO] [stderr] 33 | Peak { mz: 257.5349181, intensity: 0.0, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `257.534_918_1` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:34:24 [INFO] [stderr] | [INFO] [stderr] 34 | Peak { mz: 257.5371372, intensity: 0.0, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `257.537_137_2` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:35:24 [INFO] [stderr] | [INFO] [stderr] 35 | Peak { mz: 257.5393564, intensity: 0.0, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `257.539_356_4` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:36:24 [INFO] [stderr] | [INFO] [stderr] 36 | Peak { mz: 257.5415756, intensity: 0.0, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `257.541_575_6` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:37:24 [INFO] [stderr] | [INFO] [stderr] 37 | Peak { mz: 266.3775252, intensity: 0.0, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `266.377_525_2` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:38:24 [INFO] [stderr] | [INFO] [stderr] 38 | Peak { mz: 266.3798596, intensity: 0.0, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `266.379_859_6` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:39:24 [INFO] [stderr] | [INFO] [stderr] 39 | Peak { mz: 266.382194, intensity: 0.0, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^ help: consider: `266.382_194` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:40:24 [INFO] [stderr] | [INFO] [stderr] 40 | Peak { mz: 266.3845284, intensity: 0.0, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `266.384_528_4` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:41:24 [INFO] [stderr] | [INFO] [stderr] 41 | Peak { mz: 266.3868629, intensity: 395.335723877, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `266.386_862_9` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:41:48 [INFO] [stderr] | [INFO] [stderr] 41 | Peak { mz: 266.3868629, intensity: 395.335723877, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^^^ help: consider: `395.335_723_877` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:42:24 [INFO] [stderr] | [INFO] [stderr] 42 | Peak { mz: 266.3891974, intensity: 687.4059448242, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `266.389_197_4` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:42:48 [INFO] [stderr] | [INFO] [stderr] 42 | Peak { mz: 266.3891974, intensity: 687.4059448242, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `687.405_944_824_2` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:43:24 [INFO] [stderr] | [INFO] [stderr] 43 | Peak { mz: 266.3915319, intensity: 839.1334228516, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `266.391_531_9` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:43:48 [INFO] [stderr] | [INFO] [stderr] 43 | Peak { mz: 266.3915319, intensity: 839.1334228516, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `839.133_422_851_6` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:44:24 [INFO] [stderr] | [INFO] [stderr] 44 | Peak { mz: 266.3938665, intensity: 753.7129516602, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `266.393_866_5` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:44:48 [INFO] [stderr] | [INFO] [stderr] 44 | Peak { mz: 266.3938665, intensity: 753.7129516602, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `753.712_951_660_2` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:45:24 [INFO] [stderr] | [INFO] [stderr] 45 | Peak { mz: 266.3962011, intensity: 483.698425293, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `266.396_201_1` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:45:48 [INFO] [stderr] | [INFO] [stderr] 45 | Peak { mz: 266.3962011, intensity: 483.698425293, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^^^ help: consider: `483.698_425_293` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:46:24 [INFO] [stderr] | [INFO] [stderr] 46 | Peak { mz: 266.3985627, intensity: 0.0, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `266.398_562_7` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:47:24 [INFO] [stderr] | [INFO] [stderr] 47 | Peak { mz: 266.4008973, intensity: 0.0, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `266.400_897_3` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:48:24 [INFO] [stderr] | [INFO] [stderr] 48 | Peak { mz: 266.403232, intensity: 0.0, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^ help: consider: `266.403_232` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:49:24 [INFO] [stderr] | [INFO] [stderr] 49 | Peak { mz: 266.4055668, intensity: 0.0, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `266.405_566_8` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:50:24 [INFO] [stderr] | [INFO] [stderr] 50 | Peak { mz: 274.490484, intensity: 0.0, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^ help: consider: `274.490_484` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:51:24 [INFO] [stderr] | [INFO] [stderr] 51 | Peak { mz: 274.4929259, intensity: 0.0, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `274.492_925_9` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:52:24 [INFO] [stderr] | [INFO] [stderr] 52 | Peak { mz: 274.4953677, intensity: 0.0, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `274.495_367_7` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:53:24 [INFO] [stderr] | [INFO] [stderr] 53 | Peak { mz: 274.4978097, intensity: 0.0, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `274.497_809_7` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:54:24 [INFO] [stderr] | [INFO] [stderr] 54 | Peak { mz: 274.5002516, intensity: 359.3305664063, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `274.500_251_6` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:54:48 [INFO] [stderr] | [INFO] [stderr] 54 | Peak { mz: 274.5002516, intensity: 359.3305664063, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `359.330_566_406_3` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:55:24 [INFO] [stderr] | [INFO] [stderr] 55 | Peak { mz: 274.5026936, intensity: 691.2191162109, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `274.502_693_6` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:55:48 [INFO] [stderr] | [INFO] [stderr] 55 | Peak { mz: 274.5026936, intensity: 691.2191162109, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `691.219_116_210_9` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:56:24 [INFO] [stderr] | [INFO] [stderr] 56 | Peak { mz: 274.5051356, intensity: 1342.998046875, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `274.505_135_6` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:56:48 [INFO] [stderr] | [INFO] [stderr] 56 | Peak { mz: 274.5051356, intensity: 1342.998046875, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `1_342.998_046_875` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:57:24 [INFO] [stderr] | [INFO] [stderr] 57 | Peak { mz: 274.5075776, intensity: 1104.1827392578, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `274.507_577_6` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:57:48 [INFO] [stderr] | [INFO] [stderr] 57 | Peak { mz: 274.5075776, intensity: 1104.1827392578, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^^^^^ help: consider: `1_104.182_739_257_8` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:58:24 [INFO] [stderr] | [INFO] [stderr] 58 | Peak { mz: 274.5100197, intensity: 459.472442627, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `274.510_019_7` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:58:48 [INFO] [stderr] | [INFO] [stderr] 58 | Peak { mz: 274.5100197, intensity: 459.472442627, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^^^ help: consider: `459.472_442_627` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:59:24 [INFO] [stderr] | [INFO] [stderr] 59 | Peak { mz: 274.5124333, intensity: 0.0, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `274.512_433_3` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:60:24 [INFO] [stderr] | [INFO] [stderr] 60 | Peak { mz: 274.5148754, intensity: 0.0, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `274.514_875_4` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:61:24 [INFO] [stderr] | [INFO] [stderr] 61 | Peak { mz: 274.5173176, intensity: 0.0, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `274.517_317_6` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:62:24 [INFO] [stderr] | [INFO] [stderr] 62 | Peak { mz: 274.5197598, intensity: 0.0, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `274.519_759_8` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:63:24 [INFO] [stderr] | [INFO] [stderr] 63 | Peak { mz: 288.185445, intensity: 0.0, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^ help: consider: `288.185_445` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:64:24 [INFO] [stderr] | [INFO] [stderr] 64 | Peak { mz: 288.1880718, intensity: 0.0, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `288.188_071_8` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:65:24 [INFO] [stderr] | [INFO] [stderr] 65 | Peak { mz: 288.1906987, intensity: 0.0, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `288.190_698_7` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:66:24 [INFO] [stderr] | [INFO] [stderr] 66 | Peak { mz: 288.1933256, intensity: 0.0, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `288.193_325_6` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:67:24 [INFO] [stderr] | [INFO] [stderr] 67 | Peak { mz: 288.1959526, intensity: 513.036315918, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `288.195_952_6` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:67:48 [INFO] [stderr] | [INFO] [stderr] 67 | Peak { mz: 288.1959526, intensity: 513.036315918, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^^^ help: consider: `513.036_315_918` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:68:24 [INFO] [stderr] | [INFO] [stderr] 68 | Peak { mz: 288.1985796, intensity: 1173.0286865234, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `288.198_579_6` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:68:48 [INFO] [stderr] | [INFO] [stderr] 68 | Peak { mz: 288.1985796, intensity: 1173.0286865234, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^^^^^ help: consider: `1_173.028_686_523_4` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:69:24 [INFO] [stderr] | [INFO] [stderr] 69 | Peak { mz: 288.2012066, intensity: 1705.58203125, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `288.201_206_6` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:69:48 [INFO] [stderr] | [INFO] [stderr] 69 | Peak { mz: 288.2012066, intensity: 1705.58203125, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^^^ help: consider: `1_705.582_031_25` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:70:24 [INFO] [stderr] | [INFO] [stderr] 70 | Peak { mz: 288.2038337, intensity: 1740.2529296875, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `288.203_833_7` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:70:48 [INFO] [stderr] | [INFO] [stderr] 70 | Peak { mz: 288.2038337, intensity: 1740.2529296875, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^^^^^ help: consider: `1_740.252_929_687_5` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:71:24 [INFO] [stderr] | [INFO] [stderr] 71 | Peak { mz: 288.2064608, intensity: 1205.7132568359, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `288.206_460_8` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:71:48 [INFO] [stderr] | [INFO] [stderr] 71 | Peak { mz: 288.2064608, intensity: 1205.7132568359, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^^^^^ help: consider: `1_205.713_256_835_9` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:72:24 [INFO] [stderr] | [INFO] [stderr] 72 | Peak { mz: 288.2090879, intensity: 441.4267272949, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `288.209_087_9` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:72:48 [INFO] [stderr] | [INFO] [stderr] 72 | Peak { mz: 288.2090879, intensity: 441.4267272949, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `441.426_727_294_9` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:73:24 [INFO] [stderr] | [INFO] [stderr] 73 | Peak { mz: 288.2116643, intensity: 0.0, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `288.211_664_3` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:74:24 [INFO] [stderr] | [INFO] [stderr] 74 | Peak { mz: 288.2142915, intensity: 0.0, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `288.214_291_5` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:75:24 [INFO] [stderr] | [INFO] [stderr] 75 | Peak { mz: 288.2169188, intensity: 0.0, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `288.216_918_8` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:76:24 [INFO] [stderr] | [INFO] [stderr] 76 | Peak { mz: 288.219546, intensity: 0.0, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^ help: consider: `288.219_546` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:77:24 [INFO] [stderr] | [INFO] [stderr] 77 | Peak { mz: 296.4551094, intensity: 0.0, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `296.455_109_4` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:78:24 [INFO] [stderr] | [INFO] [stderr] 78 | Peak { mz: 296.4578501, intensity: 0.0, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `296.457_850_1` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:79:24 [INFO] [stderr] | [INFO] [stderr] 79 | Peak { mz: 296.4605908, intensity: 0.0, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `296.460_590_8` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:80:24 [INFO] [stderr] | [INFO] [stderr] 80 | Peak { mz: 296.4633316, intensity: 0.0, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `296.463_331_6` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:81:24 [INFO] [stderr] | [INFO] [stderr] 81 | Peak { mz: 296.4660725, intensity: 195.8185119629, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `296.466_072_5` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:81:48 [INFO] [stderr] | [INFO] [stderr] 81 | Peak { mz: 296.4660725, intensity: 195.8185119629, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `195.818_511_962_9` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:82:24 [INFO] [stderr] | [INFO] [stderr] 82 | Peak { mz: 296.4688134, intensity: 706.2313232422, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `296.468_813_4` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:82:48 [INFO] [stderr] | [INFO] [stderr] 82 | Peak { mz: 296.4688134, intensity: 706.2313232422, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `706.231_323_242_2` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:83:24 [INFO] [stderr] | [INFO] [stderr] 83 | Peak { mz: 296.4715543, intensity: 1314.5838623047, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `296.471_554_3` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:83:48 [INFO] [stderr] | [INFO] [stderr] 83 | Peak { mz: 296.4715543, intensity: 1314.5838623047, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^^^^^ help: consider: `1_314.583_862_304_7` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:84:24 [INFO] [stderr] | [INFO] [stderr] 84 | Peak { mz: 296.4742952, intensity: 1367.2843017578, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `296.474_295_2` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:84:48 [INFO] [stderr] | [INFO] [stderr] 84 | Peak { mz: 296.4742952, intensity: 1367.2843017578, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^^^^^ help: consider: `1_367.284_301_757_8` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:85:24 [INFO] [stderr] | [INFO] [stderr] 85 | Peak { mz: 296.4770362, intensity: 595.6688842773, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `296.477_036_2` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:85:48 [INFO] [stderr] | [INFO] [stderr] 85 | Peak { mz: 296.4770362, intensity: 595.6688842773, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^^^^ help: consider: `595.668_884_277_3` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:86:24 [INFO] [stderr] | [INFO] [stderr] 86 | Peak { mz: 296.4797232, intensity: 0.0, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `296.479_723_2` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:87:24 [INFO] [stderr] | [INFO] [stderr] 87 | Peak { mz: 296.4824643, intensity: 0.0, z: 0 }, [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `296.482_464_3` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:88:24 [INFO] [stderr] | [INFO] [stderr] 88 | Peak { mz: 296.4852054, intensity: 0.0, z: 0 }], [INFO] [stderr] | ^^^^^^^^^^^ help: consider: `296.485_205_4` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: long literal lacking separators [INFO] [stderr] --> src/db/mass_spectra/test.rs:101:27 [INFO] [stderr] | [INFO] [stderr] 101 | parent_intensity: 170643.953125, [INFO] [stderr] | ^^^^^^^^^^^^^ help: consider: `170_643.953_125` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unreadable_literal [INFO] [stderr] [INFO] [stderr] warning: Constants have by default a `'static` lifetime [INFO] [stderr] --> src/db/mass_spectra/test.rs:118:33 [INFO] [stderr] | [INFO] [stderr] 118 | pub const MSCONVERT_33450_MGF: &'static str = "BEGIN IONS\nTITLE=QPvivo_2015_11_10_1targetmethod.33450.33450.0 File:\"QPvivo_2015_11_10_1targetmethod\", NativeID:\"controllerType=0 controllerNumber=1 scan=33450\"\nRTINSECONDS=8692.0\nPEPMASS=775.15625 170643.953125\nCHARGE=4+\n205.9304178 0.0\n205.9320046 0.0\n205.9335913 0.0\n205.9351781 0.0\n257.514984 0.0\n257.5172029 0.0\n257.5194218 0.0\n257.5216407 0.0\n257.5238596 457.499206543\n257.5260786 742.1607666016\n257.5282976 832.3284301758\n257.5305166 666.099609375\n257.5327357 353.6197509766\n257.5349181 0.0\n257.5371372 0.0\n257.5393564 0.0\n257.5415756 0.0\n266.3775252 0.0\n266.3798596 0.0\n266.382194 0.0\n266.3845284 0.0\n266.3868629 395.335723877\n266.3891974 687.4059448242\n266.3915319 839.1334228516\n266.3938665 753.7129516602\n266.3962011 483.698425293\n266.3985627 0.0\n266.4008973 0.0\n266.403232 0.0\n266.4055668 0.0\n274.490484 0.0\n274.4929259 0.0\n274.4953677 0.0\n274.4978097 0.0\n274.5002516 359.3305664063\n274.5026936 691.2191162109\n274.5051356 1342.998046875\n274.5075776 1104.1827392578\n274.5100197 459.472442627\n274.5124333 0.0\n274.5148754 0.0\n274.5173176 0.0\n274.5197598 0.0\n288.185445 0.0\n288.1880718 0.0\n288.1906987 0.0\n288.1933256 0.0\n288.1959526 513.036315918\n288.1985796 1173.0286865234\n288.2012066 1705.58203125\n288.2038337 1740.2529296875\n288.2064608 1205.7132568359\n288.2090879 441.4267272949\n288.2116643 0.0\n288.2142915 0.0\n288.2169188 0.0\n288.219546 0.0\n296.4551094 0.0\n296.4578501 0.0\n296.4605908 0.0\n296.4633316 0.0\n296.4660725 195.8185119629\n296.4688134 706.2313232422\n296.4715543 1314.5838623047\n296.4742952 1367.2843017578\n296.4770362 595.6688842773\n296.4797232 0.0\n296.4824643 0.0\n296.4852054 0.0\nEND IONS\n"; [INFO] [stderr] | -^^^^^^^---- help: consider removing `'static`: `&str` [INFO] [stderr] | [INFO] [stderr] = note: #[warn(clippy::const_static_lifetime)] on by default [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#const_static_lifetime [INFO] [stderr] [INFO] [stderr] warning: Constants have by default a `'static` lifetime [INFO] [stderr] --> src/db/mass_spectra/test.rs:122:33 [INFO] [stderr] | [INFO] [stderr] 122 | pub const MSCONVERT_EMPTY_MGF: &'static str = "BEGIN IONS\nTITLE=QPvivo_2015_11_10_1targetmethod.33450.33450.0 File:\"QPvivo_2015_11_10_1targetmethod\", NativeID:\"controllerType=0 controllerNumber=1 scan=33450\"\nRTINSECONDS=8692.0\nPEPMASS=775.15625 170643.953125\nCHARGE=4+\nEND IONS\n"; [INFO] [stderr] | -^^^^^^^---- help: consider removing `'static`: `&str` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#const_static_lifetime [INFO] [stderr] [INFO] [stderr] warning: Constants have by default a `'static` lifetime [INFO] [stderr] --> src/db/mass_spectra/test.rs:128:28 [INFO] [stderr] | [INFO] [stderr] 128 | pub const PAVA_33450_MGF: &'static str = "BEGIN IONS\nTITLE=Scan 33450 (rt=8692.0) [QPvivo_2015_11_10_1targetmethod]\nPEPMASS=775.15625\t170643.953125\nCHARGE=4+\n205.9304178\t0.0\n205.9320046\t0.0\n205.9335913\t0.0\n205.9351781\t0.0\n257.514984\t0.0\n257.5172029\t0.0\n257.5194218\t0.0\n257.5216407\t0.0\n257.5238596\t457.499206543\n257.5260786\t742.1607666016\n257.5282976\t832.3284301758\n257.5305166\t666.099609375\n257.5327357\t353.6197509766\n257.5349181\t0.0\n257.5371372\t0.0\n257.5393564\t0.0\n257.5415756\t0.0\n266.3775252\t0.0\n266.3798596\t0.0\n266.382194\t0.0\n266.3845284\t0.0\n266.3868629\t395.335723877\n266.3891974\t687.4059448242\n266.3915319\t839.1334228516\n266.3938665\t753.7129516602\n266.3962011\t483.698425293\n266.3985627\t0.0\n266.4008973\t0.0\n266.403232\t0.0\n266.4055668\t0.0\n274.490484\t0.0\n274.4929259\t0.0\n274.4953677\t0.0\n274.4978097\t0.0\n274.5002516\t359.3305664063\n274.5026936\t691.2191162109\n274.5051356\t1342.998046875\n274.5075776\t1104.1827392578\n274.5100197\t459.472442627\n274.5124333\t0.0\n274.5148754\t0.0\n274.5173176\t0.0\n274.5197598\t0.0\n288.185445\t0.0\n288.1880718\t0.0\n288.1906987\t0.0\n288.1933256\t0.0\n288.1959526\t513.036315918\n288.1985796\t1173.0286865234\n288.2012066\t1705.58203125\n288.2038337\t1740.2529296875\n288.2064608\t1205.7132568359\n288.2090879\t441.4267272949\n288.2116643\t0.0\n288.2142915\t0.0\n288.2169188\t0.0\n288.219546\t0.0\n296.4551094\t0.0\n296.4578501\t0.0\n296.4605908\t0.0\n296.4633316\t0.0\n296.4660725\t195.8185119629\n296.4688134\t706.2313232422\n296.4715543\t1314.5838623047\n296.4742952\t1367.2843017578\n296.4770362\t595.6688842773\n296.4797232\t0.0\n296.4824643\t0.0\n296.4852054\t0.0\nEND IONS\n\n"; [INFO] [stderr] | -^^^^^^^---- help: consider removing `'static`: `&str` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#const_static_lifetime [INFO] [stderr] [INFO] [stderr] warning: Constants have by default a `'static` lifetime [INFO] [stderr] --> src/db/mass_spectra/test.rs:132:28 [INFO] [stderr] | [INFO] [stderr] 132 | pub const PAVA_EMPTY_MGF: &'static str = "BEGIN IONS\nTITLE=Scan 33450 (rt=8692.0) [QPvivo_2015_11_10_1targetmethod]\nPEPMASS=775.15625\t170643.953125\nCHARGE=4+\nEND IONS\n\n"; [INFO] [stderr] | -^^^^^^^---- help: consider removing `'static`: `&str` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#const_static_lifetime [INFO] [stderr] [INFO] [stderr] warning: Constants have by default a `'static` lifetime [INFO] [stderr] --> src/db/mass_spectra/test.rs:138:28 [INFO] [stderr] | [INFO] [stderr] 138 | pub const PWIZ_33450_MGF: &'static str = "BEGIN IONS\nTITLE=QPvivo_2015_11_10_1targetmethod Spectrum0 scans: 33450\nPEPMASS=775.15625 170643.953125\nCHARGE=4+\nRTINSECONDS=8692\nSCANS=33450\n205.9304178 0.0\n205.9320046 0.0\n205.9335913 0.0\n205.9351781 0.0\n257.514984 0.0\n257.5172029 0.0\n257.5194218 0.0\n257.5216407 0.0\n257.5238596 457.499206543\n257.5260786 742.1607666016\n257.5282976 832.3284301758\n257.5305166 666.099609375\n257.5327357 353.6197509766\n257.5349181 0.0\n257.5371372 0.0\n257.5393564 0.0\n257.5415756 0.0\n266.3775252 0.0\n266.3798596 0.0\n266.382194 0.0\n266.3845284 0.0\n266.3868629 395.335723877\n266.3891974 687.4059448242\n266.3915319 839.1334228516\n266.3938665 753.7129516602\n266.3962011 483.698425293\n266.3985627 0.0\n266.4008973 0.0\n266.403232 0.0\n266.4055668 0.0\n274.490484 0.0\n274.4929259 0.0\n274.4953677 0.0\n274.4978097 0.0\n274.5002516 359.3305664063\n274.5026936 691.2191162109\n274.5051356 1342.998046875\n274.5075776 1104.1827392578\n274.5100197 459.472442627\n274.5124333 0.0\n274.5148754 0.0\n274.5173176 0.0\n274.5197598 0.0\n288.185445 0.0\n288.1880718 0.0\n288.1906987 0.0\n288.1933256 0.0\n288.1959526 513.036315918\n288.1985796 1173.0286865234\n288.2012066 1705.58203125\n288.2038337 1740.2529296875\n288.2064608 1205.7132568359\n288.2090879 441.4267272949\n288.2116643 0.0\n288.2142915 0.0\n288.2169188 0.0\n288.219546 0.0\n296.4551094 0.0\n296.4578501 0.0\n296.4605908 0.0\n296.4633316 0.0\n296.4660725 195.8185119629\n296.4688134 706.2313232422\n296.4715543 1314.5838623047\n296.4742952 1367.2843017578\n296.4770362 595.6688842773\n296.4797232 0.0\n296.4824643 0.0\n296.4852054 0.0\nEND IONS\n\n"; [INFO] [stderr] | -^^^^^^^---- help: consider removing `'static`: `&str` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#const_static_lifetime [INFO] [stderr] [INFO] [stderr] warning: Constants have by default a `'static` lifetime [INFO] [stderr] --> src/db/mass_spectra/test.rs:142:28 [INFO] [stderr] | [INFO] [stderr] 142 | pub const PWIZ_EMPTY_MGF: &'static str = "BEGIN IONS\nTITLE=QPvivo_2015_11_10_1targetmethod Spectrum0 scans: 33450\nPEPMASS=775.15625 170643.953125\nCHARGE=4+\nRTINSECONDS=8692\nSCANS=33450\nEND IONS\n\n"; [INFO] [stderr] | -^^^^^^^---- help: consider removing `'static`: `&str` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#const_static_lifetime [INFO] [stderr] [INFO] [stderr] warning: Constants have by default a `'static` lifetime [INFO] [stderr] --> src/db/uniprot/csv.rs:18:26 [INFO] [stderr] | [INFO] [stderr] 18 | const SEQUENCE_VERSION: &'static str = "Version (sequence)"; [INFO] [stderr] | -^^^^^^^---- help: consider removing `'static`: `&str` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#const_static_lifetime [INFO] [stderr] [INFO] [stderr] warning: Constants have by default a `'static` lifetime [INFO] [stderr] --> src/db/uniprot/csv.rs:21:26 [INFO] [stderr] | [INFO] [stderr] 21 | const PROTEIN_EVIDENCE: &'static str = "Protein existence"; [INFO] [stderr] | -^^^^^^^---- help: consider removing `'static`: `&str` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#const_static_lifetime [INFO] [stderr] [INFO] [stderr] warning: Constants have by default a `'static` lifetime [INFO] [stderr] --> src/db/uniprot/csv.rs:24:14 [INFO] [stderr] | [INFO] [stderr] 24 | const MASS: &'static str = "Mass"; [INFO] [stderr] | -^^^^^^^---- help: consider removing `'static`: `&str` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#const_static_lifetime [INFO] [stderr] [INFO] [stderr] warning: Constants have by default a `'static` lifetime [INFO] [stderr] --> src/db/uniprot/csv.rs:27:16 [INFO] [stderr] | [INFO] [stderr] 27 | const LENGTH: &'static str = "Length"; [INFO] [stderr] | -^^^^^^^---- help: consider removing `'static`: `&str` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#const_static_lifetime [INFO] [stderr] [INFO] [stderr] warning: Constants have by default a `'static` lifetime [INFO] [stderr] --> src/db/uniprot/csv.rs:30:14 [INFO] [stderr] | [INFO] [stderr] 30 | const GENE: &'static str = "Gene names (primary )"; [INFO] [stderr] | -^^^^^^^---- help: consider removing `'static`: `&str` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#const_static_lifetime [INFO] [stderr] [INFO] [stderr] warning: Constants have by default a `'static` lifetime [INFO] [stderr] --> src/db/uniprot/csv.rs:33:12 [INFO] [stderr] | [INFO] [stderr] 33 | const ID: &'static str = "Entry"; [INFO] [stderr] | -^^^^^^^---- help: consider removing `'static`: `&str` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#const_static_lifetime [INFO] [stderr] [INFO] [stderr] warning: Constants have by default a `'static` lifetime [INFO] [stderr] --> src/db/uniprot/csv.rs:36:18 [INFO] [stderr] | [INFO] [stderr] 36 | const MNEMONIC: &'static str = "Entry name"; [INFO] [stderr] | -^^^^^^^---- help: consider removing `'static`: `&str` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#const_static_lifetime [INFO] [stderr] [INFO] [stderr] warning: Constants have by default a `'static` lifetime [INFO] [stderr] --> src/db/uniprot/csv.rs:39:14 [INFO] [stderr] | [INFO] [stderr] 39 | const NAME: &'static str = "Protein names"; [INFO] [stderr] | -^^^^^^^---- help: consider removing `'static`: `&str` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#const_static_lifetime [INFO] [stderr] [INFO] [stderr] warning: Constants have by default a `'static` lifetime [INFO] [stderr] --> src/db/uniprot/csv.rs:42:18 [INFO] [stderr] | [INFO] [stderr] 42 | const ORGANISM: &'static str = "Organism"; [INFO] [stderr] | -^^^^^^^---- help: consider removing `'static`: `&str` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#const_static_lifetime [INFO] [stderr] [INFO] [stderr] warning: Constants have by default a `'static` lifetime [INFO] [stderr] --> src/db/uniprot/csv.rs:45:18 [INFO] [stderr] | [INFO] [stderr] 45 | const PROTEOME: &'static str = "Proteomes"; [INFO] [stderr] | -^^^^^^^---- help: consider removing `'static`: `&str` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#const_static_lifetime [INFO] [stderr] [INFO] [stderr] warning: Constants have by default a `'static` lifetime [INFO] [stderr] --> src/db/uniprot/csv.rs:48:18 [INFO] [stderr] | [INFO] [stderr] 48 | const SEQUENCE: &'static str = "Sequence"; [INFO] [stderr] | -^^^^^^^---- help: consider removing `'static`: `&str` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#const_static_lifetime [INFO] [stderr] [INFO] [stderr] warning: Constants have by default a `'static` lifetime [INFO] [stderr] --> src/db/uniprot/csv.rs:51:18 [INFO] [stderr] | [INFO] [stderr] 51 | const TAXONOMY: &'static str = "Organism ID"; [INFO] [stderr] | -^^^^^^^---- help: consider removing `'static`: `&str` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#const_static_lifetime [INFO] [stderr] [INFO] [stderr] warning: Constants have by default a `'static` lifetime [INFO] [stderr] --> src/db/uniprot/csv.rs:54:18 [INFO] [stderr] | [INFO] [stderr] 54 | const REVIEWED: &'static str = "Status"; [INFO] [stderr] | -^^^^^^^---- help: consider removing `'static`: `&str` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#const_static_lifetime [INFO] [stderr] [INFO] [stderr] warning: Constants have by default a `'static` lifetime [INFO] [stderr] --> src/db/uniprot/csv.rs:59:21 [INFO] [stderr] | [INFO] [stderr] 59 | const CSV_HEADER: [&'static str; 13] = [ [INFO] [stderr] | -^^^^^^^---- help: consider removing `'static`: `&str` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#const_static_lifetime [INFO] [stderr] [INFO] [stderr] warning: Constants have by default a `'static` lifetime [INFO] [stderr] --> src/db/uniprot/test.rs:83:25 [INFO] [stderr] | [INFO] [stderr] 83 | pub const GAPDH_FASTA: &'static str = ">sp|P46406|G3P_RABIT Glyceraldehyde-3-phosphate dehydrogenase OS=Oryctolagus cuniculus OX=9986 GN=GAPDH PE=1 SV=3\nMVKVGVNGFGRIGRLVTRAAFNSGKVDVVAINDPFIDLHYMVYMFQYDSTHGKFHGTVKA\nENGKLVINGKAITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIIS\nAPSADAPMFVMGVNHEKYDNSLKIVSNASCTTNCLAPLAKVIHDHFGIVEGLMTTVHAIT\nATQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSV\nVDLTCRLEKAAKYDDIKKVVKQASEGPLKGILGYTEDQVVSCDFNSATHSSTFDAGAGIA\nLNDHFVKLISWYDNEFGYSNRVVDLMVHMASKE"; [INFO] [stderr] | -^^^^^^^---- help: consider removing `'static`: `&str` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#const_static_lifetime [INFO] [stderr] [INFO] [stderr] warning: Constants have by default a `'static` lifetime [INFO] [stderr] --> src/db/uniprot/test.rs:87:23 [INFO] [stderr] | [INFO] [stderr] 87 | pub const BSA_FASTA: &'static str = ">sp|P02769|ALBU_BOVIN Serum albumin OS=Bos taurus OX=9913 GN=ALB PE=1 SV=4\nMKWVTFISLLLLFSSAYSRGVFRRDTHKSEIAHRFKDLGEEHFKGLVLIAFSQYLQQCPF\nDEHVKLVNELTEFAKTCVADESHAGCEKSLHTLFGDELCKVASLRETYGDMADCCEKQEP\nERNECFLSHKDDSPDLPKLKPDPNTLCDEFKADEKKFWGKYLYEIARRHPYFYAPELLYY\nANKYNGVFQECCQAEDKGACLLPKIETMREKVLASSARQRLRCASIQKFGERALKAWSVA\nRLSQKFPKAEFVEVTKLVTDLTKVHKECCHGDLLECADDRADLAKYICDNQDTISSKLKE\nCCDKPLLEKSHCIAEVEKDAIPENLPPLTADFAEDKDVCKNYQEAKDAFLGSFLYEYSRR\nHPEYAVSVLLRLAKEYEATLEECCAKDDPHACYSTVFDKLKHLVDEPQNLIKQNCDQFEK\nLGEYGFQNALIVRYTRKVPQVSTPTLVEVSRSLGKVGTRCCTKPESERMPCTEDYLSLIL\nNRLCVLHEKTPVSEKVTKCCTESLVNRRPCFSALTPDETYVPKAFDEKLFTFHADICTLP\nDTEKQIKKQTALVELLKHKPKATEEQLKTVMENFVAFVDKCCAADDKEACFAVEGPKLVV\nSTQTALA"; [INFO] [stderr] | -^^^^^^^---- help: consider removing `'static`: `&str` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#const_static_lifetime [INFO] [stderr] [INFO] [stderr] warning: Constants have by default a `'static` lifetime [INFO] [stderr] --> src/db/uniprot/test.rs:91:25 [INFO] [stderr] | [INFO] [stderr] 91 | pub const EMPTY_FASTA: &'static str = ">tr|| OS= PE=5 SV=0"; [INFO] [stderr] | -^^^^^^^---- help: consider removing `'static`: `&str` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#const_static_lifetime [INFO] [stderr] [INFO] [stderr] warning: Constants have by default a `'static` lifetime [INFO] [stderr] --> src/db/uniprot/test.rs:95:29 [INFO] [stderr] | [INFO] [stderr] 95 | pub const GAPDH_BSA_FASTA: &'static str = ">sp|P46406|G3P_RABIT Glyceraldehyde-3-phosphate dehydrogenase OS=Oryctolagus cuniculus OX=9986 GN=GAPDH PE=1 SV=3\nMVKVGVNGFGRIGRLVTRAAFNSGKVDVVAINDPFIDLHYMVYMFQYDSTHGKFHGTVKA\nENGKLVINGKAITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIIS\nAPSADAPMFVMGVNHEKYDNSLKIVSNASCTTNCLAPLAKVIHDHFGIVEGLMTTVHAIT\nATQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSV\nVDLTCRLEKAAKYDDIKKVVKQASEGPLKGILGYTEDQVVSCDFNSATHSSTFDAGAGIA\nLNDHFVKLISWYDNEFGYSNRVVDLMVHMASKE\n>sp|P02769|ALBU_BOVIN Serum albumin OS=Bos taurus OX=9913 GN=ALB PE=1 SV=4\nMKWVTFISLLLLFSSAYSRGVFRRDTHKSEIAHRFKDLGEEHFKGLVLIAFSQYLQQCPF\nDEHVKLVNELTEFAKTCVADESHAGCEKSLHTLFGDELCKVASLRETYGDMADCCEKQEP\nERNECFLSHKDDSPDLPKLKPDPNTLCDEFKADEKKFWGKYLYEIARRHPYFYAPELLYY\nANKYNGVFQECCQAEDKGACLLPKIETMREKVLASSARQRLRCASIQKFGERALKAWSVA\nRLSQKFPKAEFVEVTKLVTDLTKVHKECCHGDLLECADDRADLAKYICDNQDTISSKLKE\nCCDKPLLEKSHCIAEVEKDAIPENLPPLTADFAEDKDVCKNYQEAKDAFLGSFLYEYSRR\nHPEYAVSVLLRLAKEYEATLEECCAKDDPHACYSTVFDKLKHLVDEPQNLIKQNCDQFEK\nLGEYGFQNALIVRYTRKVPQVSTPTLVEVSRSLGKVGTRCCTKPESERMPCTEDYLSLIL\nNRLCVLHEKTPVSEKVTKCCTESLVNRRPCFSALTPDETYVPKAFDEKLFTFHADICTLP\nDTEKQIKKQTALVELLKHKPKATEEQLKTVMENFVAFVDKCCAADDKEACFAVEGPKLVV\nSTQTALA"; [INFO] [stderr] | -^^^^^^^---- help: consider removing `'static`: `&str` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#const_static_lifetime [INFO] [stderr] [INFO] [stderr] warning: Constants have by default a `'static` lifetime [INFO] [stderr] --> src/db/uniprot/test.rs:99:31 [INFO] [stderr] | [INFO] [stderr] 99 | pub const GAPDH_EMPTY_FASTA: &'static str = ">sp|P46406|G3P_RABIT Glyceraldehyde-3-phosphate dehydrogenase OS=Oryctolagus cuniculus OX=9986 GN=GAPDH PE=1 SV=3\nMVKVGVNGFGRIGRLVTRAAFNSGKVDVVAINDPFIDLHYMVYMFQYDSTHGKFHGTVKA\nENGKLVINGKAITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIIS\nAPSADAPMFVMGVNHEKYDNSLKIVSNASCTTNCLAPLAKVIHDHFGIVEGLMTTVHAIT\nATQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSV\nVDLTCRLEKAAKYDDIKKVVKQASEGPLKGILGYTEDQVVSCDFNSATHSSTFDAGAGIA\nLNDHFVKLISWYDNEFGYSNRVVDLMVHMASKE\n>tr|| OS= PE=5 SV=0"; [INFO] [stderr] | -^^^^^^^---- help: consider removing `'static`: `&str` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#const_static_lifetime [INFO] [stderr] [INFO] [stderr] warning: Constants have by default a `'static` lifetime [INFO] [stderr] --> src/db/uniprot/test.rs:105:28 [INFO] [stderr] | [INFO] [stderr] 105 | pub const HEADER_CSV_TAB: &'static str = "Version (sequence)\tProtein existence\tMass\tLength\tGene names (primary )\tEntry\tEntry name\tProtein names\tOrganism\tProteomes\tSequence\tOrganism ID\tStatus\n"; [INFO] [stderr] | -^^^^^^^---- help: consider removing `'static`: `&str` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#const_static_lifetime [INFO] [stderr] [INFO] [stderr] warning: Constants have by default a `'static` lifetime [INFO] [stderr] --> src/db/uniprot/test.rs:109:27 [INFO] [stderr] | [INFO] [stderr] 109 | pub const GAPDH_CSV_TAB: &'static str = "Version (sequence)\tProtein existence\tMass\tLength\tGene names (primary )\tEntry\tEntry name\tProtein names\tOrganism\tProteomes\tSequence\tOrganism ID\tStatus\n3\tEvidence at protein level\t35,780\t333\tGAPDH\tP46406\tG3P_RABIT\tGlyceraldehyde-3-phosphate dehydrogenase\tOryctolagus cuniculus\tUP000001811\tMVKVGVNGFGRIGRLVTRAAFNSGKVDVVAINDPFIDLHYMVYMFQYDSTHGKFHGTVKAENGKLVINGKAITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKYDNSLKIVSNASCTTNCLAPLAKVIHDHFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKAAKYDDIKKVVKQASEGPLKGILGYTEDQVVSCDFNSATHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDLMVHMASKE\t9986\treviewed\n"; [INFO] [stderr] | -^^^^^^^---- help: consider removing `'static`: `&str` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#const_static_lifetime [INFO] [stderr] [INFO] [stderr] warning: Constants have by default a `'static` lifetime [INFO] [stderr] --> src/db/uniprot/test.rs:113:29 [INFO] [stderr] | [INFO] [stderr] 113 | pub const GAPDH_CSV_COMMA: &'static str = "Version (sequence),Protein existence,Mass,Length,Gene names (primary ),Entry,Entry name,Protein names,Organism,Proteomes,Sequence,Organism ID,Status\n3,Evidence at protein level,\"35,780\",333,GAPDH,P46406,G3P_RABIT,Glyceraldehyde-3-phosphate dehydrogenase,Oryctolagus cuniculus,UP000001811,MVKVGVNGFGRIGRLVTRAAFNSGKVDVVAINDPFIDLHYMVYMFQYDSTHGKFHGTVKAENGKLVINGKAITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKYDNSLKIVSNASCTTNCLAPLAKVIHDHFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKAAKYDDIKKVVKQASEGPLKGILGYTEDQVVSCDFNSATHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDLMVHMASKE,9986,reviewed\n"; [INFO] [stderr] | -^^^^^^^---- help: consider removing `'static`: `&str` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#const_static_lifetime [INFO] [stderr] [INFO] [stderr] warning: Constants have by default a `'static` lifetime [INFO] [stderr] --> src/db/uniprot/test.rs:117:25 [INFO] [stderr] | [INFO] [stderr] 117 | pub const BSA_CSV_TAB: &'static str = "Version (sequence)\tProtein existence\tMass\tLength\tGene names (primary )\tEntry\tEntry name\tProtein names\tOrganism\tProteomes\tSequence\tOrganism ID\tStatus\n4\tEvidence at protein level\t69,293\t607\tALB\tP02769\tALBU_BOVIN\tSerum albumin\tBos taurus\tUP000009136\tMKWVTFISLLLLFSSAYSRGVFRRDTHKSEIAHRFKDLGEEHFKGLVLIAFSQYLQQCPFDEHVKLVNELTEFAKTCVADESHAGCEKSLHTLFGDELCKVASLRETYGDMADCCEKQEPERNECFLSHKDDSPDLPKLKPDPNTLCDEFKADEKKFWGKYLYEIARRHPYFYAPELLYYANKYNGVFQECCQAEDKGACLLPKIETMREKVLASSARQRLRCASIQKFGERALKAWSVARLSQKFPKAEFVEVTKLVTDLTKVHKECCHGDLLECADDRADLAKYICDNQDTISSKLKECCDKPLLEKSHCIAEVEKDAIPENLPPLTADFAEDKDVCKNYQEAKDAFLGSFLYEYSRRHPEYAVSVLLRLAKEYEATLEECCAKDDPHACYSTVFDKLKHLVDEPQNLIKQNCDQFEKLGEYGFQNALIVRYTRKVPQVSTPTLVEVSRSLGKVGTRCCTKPESERMPCTEDYLSLILNRLCVLHEKTPVSEKVTKCCTESLVNRRPCFSALTPDETYVPKAFDEKLFTFHADICTLPDTEKQIKKQTALVELLKHKPKATEEQLKTVMENFVAFVDKCCAADDKEACFAVEGPKLVVSTQTALA\t9913\treviewed\n"; [INFO] [stderr] | -^^^^^^^---- help: consider removing `'static`: `&str` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#const_static_lifetime [INFO] [stderr] [INFO] [stderr] warning: Constants have by default a `'static` lifetime [INFO] [stderr] --> src/db/uniprot/test.rs:121:27 [INFO] [stderr] | [INFO] [stderr] 121 | pub const BSA_CSV_COMMA: &'static str = "Version (sequence),Protein existence,Mass,Length,Gene names (primary ),Entry,Entry name,Protein names,Organism,Proteomes,Sequence,Organism ID,Status\n4,Evidence at protein level,\"69,293\",607,ALB,P02769,ALBU_BOVIN,Serum albumin,Bos taurus,UP000009136,MKWVTFISLLLLFSSAYSRGVFRRDTHKSEIAHRFKDLGEEHFKGLVLIAFSQYLQQCPFDEHVKLVNELTEFAKTCVADESHAGCEKSLHTLFGDELCKVASLRETYGDMADCCEKQEPERNECFLSHKDDSPDLPKLKPDPNTLCDEFKADEKKFWGKYLYEIARRHPYFYAPELLYYANKYNGVFQECCQAEDKGACLLPKIETMREKVLASSARQRLRCASIQKFGERALKAWSVARLSQKFPKAEFVEVTKLVTDLTKVHKECCHGDLLECADDRADLAKYICDNQDTISSKLKECCDKPLLEKSHCIAEVEKDAIPENLPPLTADFAEDKDVCKNYQEAKDAFLGSFLYEYSRRHPEYAVSVLLRLAKEYEATLEECCAKDDPHACYSTVFDKLKHLVDEPQNLIKQNCDQFEKLGEYGFQNALIVRYTRKVPQVSTPTLVEVSRSLGKVGTRCCTKPESERMPCTEDYLSLILNRLCVLHEKTPVSEKVTKCCTESLVNRRPCFSALTPDETYVPKAFDEKLFTFHADICTLPDTEKQIKKQTALVELLKHKPKATEEQLKTVMENFVAFVDKCCAADDKEACFAVEGPKLVVSTQTALA,9913,reviewed\n"; [INFO] [stderr] | -^^^^^^^---- help: consider removing `'static`: `&str` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#const_static_lifetime [INFO] [stderr] [INFO] [stderr] warning: Constants have by default a `'static` lifetime [INFO] [stderr] --> src/db/uniprot/test.rs:125:27 [INFO] [stderr] | [INFO] [stderr] 125 | pub const EMPTY_CSV_TAB: &'static str = "Version (sequence)\tProtein existence\tMass\tLength\tGene names (primary )\tEntry\tEntry name\tProtein names\tOrganism\tProteomes\tSequence\tOrganism ID\tStatus\n\t\t\t\t\t\t\t\t\t\t\t\tunreviewed\n"; [INFO] [stderr] | -^^^^^^^---- help: consider removing `'static`: `&str` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#const_static_lifetime [INFO] [stderr] [INFO] [stderr] warning: Constants have by default a `'static` lifetime [INFO] [stderr] --> src/db/uniprot/test.rs:129:29 [INFO] [stderr] | [INFO] [stderr] 129 | pub const EMPTY_CSV_COMMA: &'static str = "Version (sequence),Protein existence,Mass,Length,Gene names (primary ),Entry,Entry name,Protein names,Organism,Proteomes,Sequence,Organism ID,Status\n,,,,,,,,,,,,unreviewed\n"; [INFO] [stderr] | -^^^^^^^---- help: consider removing `'static`: `&str` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#const_static_lifetime [INFO] [stderr] [INFO] [stderr] warning: Constants have by default a `'static` lifetime [INFO] [stderr] --> src/db/uniprot/test.rs:133:31 [INFO] [stderr] | [INFO] [stderr] 133 | pub const GAPDH_BSA_CSV_TAB: &'static str = "Version (sequence)\tProtein existence\tMass\tLength\tGene names (primary )\tEntry\tEntry name\tProtein names\tOrganism\tProteomes\tSequence\tOrganism ID\tStatus\n3\tEvidence at protein level\t35,780\t333\tGAPDH\tP46406\tG3P_RABIT\tGlyceraldehyde-3-phosphate dehydrogenase\tOryctolagus cuniculus\tUP000001811\tMVKVGVNGFGRIGRLVTRAAFNSGKVDVVAINDPFIDLHYMVYMFQYDSTHGKFHGTVKAENGKLVINGKAITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKYDNSLKIVSNASCTTNCLAPLAKVIHDHFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKAAKYDDIKKVVKQASEGPLKGILGYTEDQVVSCDFNSATHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDLMVHMASKE\t9986\treviewed\n4\tEvidence at protein level\t69,293\t607\tALB\tP02769\tALBU_BOVIN\tSerum albumin\tBos taurus\tUP000009136\tMKWVTFISLLLLFSSAYSRGVFRRDTHKSEIAHRFKDLGEEHFKGLVLIAFSQYLQQCPFDEHVKLVNELTEFAKTCVADESHAGCEKSLHTLFGDELCKVASLRETYGDMADCCEKQEPERNECFLSHKDDSPDLPKLKPDPNTLCDEFKADEKKFWGKYLYEIARRHPYFYAPELLYYANKYNGVFQECCQAEDKGACLLPKIETMREKVLASSARQRLRCASIQKFGERALKAWSVARLSQKFPKAEFVEVTKLVTDLTKVHKECCHGDLLECADDRADLAKYICDNQDTISSKLKECCDKPLLEKSHCIAEVEKDAIPENLPPLTADFAEDKDVCKNYQEAKDAFLGSFLYEYSRRHPEYAVSVLLRLAKEYEATLEECCAKDDPHACYSTVFDKLKHLVDEPQNLIKQNCDQFEKLGEYGFQNALIVRYTRKVPQVSTPTLVEVSRSLGKVGTRCCTKPESERMPCTEDYLSLILNRLCVLHEKTPVSEKVTKCCTESLVNRRPCFSALTPDETYVPKAFDEKLFTFHADICTLPDTEKQIKKQTALVELLKHKPKATEEQLKTVMENFVAFVDKCCAADDKEACFAVEGPKLVVSTQTALA\t9913\treviewed\n"; [INFO] [stderr] | -^^^^^^^---- help: consider removing `'static`: `&str` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#const_static_lifetime [INFO] [stderr] [INFO] [stderr] warning: Constants have by default a `'static` lifetime [INFO] [stderr] --> src/db/uniprot/test.rs:137:33 [INFO] [stderr] | [INFO] [stderr] 137 | pub const GAPDH_EMPTY_CSV_TAB: &'static str = "Version (sequence)\tProtein existence\tMass\tLength\tGene names (primary )\tEntry\tEntry name\tProtein names\tOrganism\tProteomes\tSequence\tOrganism ID\tStatus\n3\tEvidence at protein level\t35,780\t333\tGAPDH\tP46406\tG3P_RABIT\tGlyceraldehyde-3-phosphate dehydrogenase\tOryctolagus cuniculus\tUP000001811\tMVKVGVNGFGRIGRLVTRAAFNSGKVDVVAINDPFIDLHYMVYMFQYDSTHGKFHGTVKAENGKLVINGKAITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKYDNSLKIVSNASCTTNCLAPLAKVIHDHFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKAAKYDDIKKVVKQASEGPLKGILGYTEDQVVSCDFNSATHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDLMVHMASKE\t9986\treviewed\n\t\t\t\t\t\t\t\t\t\t\t\tunreviewed\n"; [INFO] [stderr] | -^^^^^^^---- help: consider removing `'static`: `&str` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#const_static_lifetime [INFO] [stderr] [INFO] [stderr] warning: Constants have by default a `'static` lifetime [INFO] [stderr] --> src/db/uniprot/test.rs:142:29 [INFO] [stderr] | [INFO] [stderr] 142 | pub const GAPDH_EMPTY_XML: &'static str = "P46406G3P_RABITGlyceraldehyde-3-phosphate dehydrogenaseGAPDHGAPDHOryctolagus cuniculusMVKVGVNGFGRIGRLVTRAAFNSGKVDVVAINDPFIDLHYMVYMFQYDSTHGKFHGTVKAENGKLVINGKAITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKYDNSLKIVSNASCTTNCLAPLAKVIHDHFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKAAKYDDIKKVVKQASEGPLKGILGYTEDQVVSCDFNSATHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDLMVHMASKE"; [INFO] [stderr] | -^^^^^^^---- help: consider removing `'static`: `&str` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#const_static_lifetime [INFO] [stderr] [INFO] [stderr] warning: Constants have by default a `'static` lifetime [INFO] [stderr] --> src/db/uniprot/test.rs:145:27 [INFO] [stderr] | [INFO] [stderr] 145 | pub const GAPDH_BSA_XML: &'static str = "P46406G3P_RABITGlyceraldehyde-3-phosphate dehydrogenaseGAPDHGAPDHOryctolagus cuniculusMVKVGVNGFGRIGRLVTRAAFNSGKVDVVAINDPFIDLHYMVYMFQYDSTHGKFHGTVKAENGKLVINGKAITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKYDNSLKIVSNASCTTNCLAPLAKVIHDHFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKAAKYDDIKKVVKQASEGPLKGILGYTEDQVVSCDFNSATHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDLMVHMASKEP02769ALBU_BOVINSerum albuminALBALBBos taurusMKWVTFISLLLLFSSAYSRGVFRRDTHKSEIAHRFKDLGEEHFKGLVLIAFSQYLQQCPFDEHVKLVNELTEFAKTCVADESHAGCEKSLHTLFGDELCKVASLRETYGDMADCCEKQEPERNECFLSHKDDSPDLPKLKPDPNTLCDEFKADEKKFWGKYLYEIARRHPYFYAPELLYYANKYNGVFQECCQAEDKGACLLPKIETMREKVLASSARQRLRCASIQKFGERALKAWSVARLSQKFPKAEFVEVTKLVTDLTKVHKECCHGDLLECADDRADLAKYICDNQDTISSKLKECCDKPLLEKSHCIAEVEKDAIPENLPPLTADFAEDKDVCKNYQEAKDAFLGSFLYEYSRRHPEYAVSVLLRLAKEYEATLEECCAKDDPHACYSTVFDKLKHLVDEPQNLIKQNCDQFEKLGEYGFQNALIVRYTRKVPQVSTPTLVEVSRSLGKVGTRCCTKPESERMPCTEDYLSLILNRLCVLHEKTPVSEKVTKCCTESLVNRRPCFSALTPDETYVPKAFDEKLFTFHADICTLPDTEKQIKKQTALVELLKHKPKATEEQLKTVMENFVAFVDKCCAADDKEACFAVEGPKLVVSTQTALA"; [INFO] [stderr] | -^^^^^^^---- help: consider removing `'static`: `&str` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#const_static_lifetime [INFO] [stderr] [INFO] [stderr] warning: you seem to be trying to match on a boolean expression [INFO] [stderr] --> src/util/iterator.rs:33:13 [INFO] [stderr] | [INFO] [stderr] 33 | / match r.is_valid() { [INFO] [stderr] 34 | | true => Ok(r), [INFO] [stderr] 35 | | false => Err(From::from(ErrorKind::InvalidRecord)), [INFO] [stderr] 36 | | } [INFO] [stderr] | |_____________^ help: consider using an if/else expression: `if r.is_valid() { Ok(r) } else { Err(From::from(ErrorKind::InvalidRecord)) }` [INFO] [stderr] | [INFO] [stderr] = note: #[warn(clippy::match_bool)] on by default [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#match_bool [INFO] [stderr] [INFO] [stderr] warning: length comparison to zero [INFO] [stderr] --> src/util/iterator.rs:372:19 [INFO] [stderr] | [INFO] [stderr] 372 | } else if buf.len() > 0 && line.starts_with(start) { [INFO] [stderr] | ^^^^^^^^^^^^^ help: using `is_empty` is clearer and more explicit: `!buf.is_empty()` [INFO] [stderr] | [INFO] [stderr] = note: #[warn(clippy::len_zero)] on by default [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#len_zero [INFO] [stderr] [INFO] [stderr] warning: this lifetime isn't used in the function definition [INFO] [stderr] --> src/util/xml.rs:499:25 [INFO] [stderr] | [INFO] [stderr] 499 | fn new_text_element<'a>(text: &[u8]) -> BytesText { [INFO] [stderr] | ^^ [INFO] [stderr] | [INFO] [stderr] = note: #[warn(clippy::extra_unused_lifetimes)] on by default [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#extra_unused_lifetimes [INFO] [stderr] [INFO] [stderr] warning: you should consider deriving a `Default` implementation for `db::mass_spectra::peak::Peak` [INFO] [stderr] --> src/db/mass_spectra/peak.rs:17:5 [INFO] [stderr] | [INFO] [stderr] 17 | / pub fn new() -> Self { [INFO] [stderr] 18 | | Peak { [INFO] [stderr] 19 | | mz: 0.0, [INFO] [stderr] 20 | | intensity: 0.0, [INFO] [stderr] 21 | | z: 0, [INFO] [stderr] 22 | | } [INFO] [stderr] 23 | | } [INFO] [stderr] | |_____^ [INFO] [stderr] | [INFO] [stderr] = note: #[warn(clippy::new_without_default_derive)] on by default [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#new_without_default_derive [INFO] [stderr] help: try this [INFO] [stderr] | [INFO] [stderr] 5 | #[derive(Default)] [INFO] [stderr] | [INFO] [stderr] [INFO] [stderr] warning: you should consider deriving a `Default` implementation for `db::mass_spectra::record::Record` [INFO] [stderr] --> src/db/mass_spectra/record.rs:35:5 [INFO] [stderr] | [INFO] [stderr] 35 | / pub fn new() -> Self { [INFO] [stderr] 36 | | Record { [INFO] [stderr] 37 | | num: 0, [INFO] [stderr] 38 | | ms_level: 0, [INFO] [stderr] ... | [INFO] [stderr] 48 | | } [INFO] [stderr] 49 | | } [INFO] [stderr] | |_____^ [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#new_without_default_derive [INFO] [stderr] help: try this [INFO] [stderr] | [INFO] [stderr] 7 | #[derive(Default)] [INFO] [stderr] | [INFO] [stderr] [INFO] [stderr] warning: The function/method `len` doesn't need a mutable reference [INFO] [stderr] --> src/db/mass_spectra/mgf.rs:45:38 [INFO] [stderr] | [INFO] [stderr] 45 | text_next!(&mut self.reader, &mut self.buf, &mut self.line, unsafe { [INFO] [stderr] | ^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: #[warn(clippy::unnecessary_mut_passed)] on by default [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unnecessary_mut_passed [INFO] [stderr] [INFO] [stderr] warning: length comparison to zero [INFO] [stderr] --> src/db/mass_spectra/mgf.rs:50:23 [INFO] [stderr] | [INFO] [stderr] 50 | } else if self.buf.len() > 0 && self.line.starts_with(self.start) { [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^ help: using `is_empty` is clearer and more explicit: `!self.buf.is_empty()` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#len_zero [INFO] [stderr] [INFO] [stderr] warning: writing `&Vec<_>` instead of `&[_]` involves one more reference and cannot be used with non-Vec-based slices. [INFO] [stderr] --> src/db/mass_spectra/mgf.rs:80:29 [INFO] [stderr] | [INFO] [stderr] 80 | fn estimate_list_size(list: &RecordList, kind: MgfKind) -> usize { [INFO] [stderr] | ^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: #[warn(clippy::ptr_arg)] on by default [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#ptr_arg [INFO] [stderr] [INFO] [stderr] warning: you should consider deriving a `Default` implementation for `db::sra::record::Record` [INFO] [stderr] --> src/db/sra/record.rs:21:5 [INFO] [stderr] | [INFO] [stderr] 21 | / pub fn new() -> Self { [INFO] [stderr] 22 | | Record { [INFO] [stderr] 23 | | seq_id: String::new(), [INFO] [stderr] 24 | | description: String::new(), [INFO] [stderr] ... | [INFO] [stderr] 28 | | } [INFO] [stderr] 29 | | } [INFO] [stderr] | |_____^ [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#new_without_default_derive [INFO] [stderr] help: try this [INFO] [stderr] | [INFO] [stderr] 5 | #[derive(Default)] [INFO] [stderr] | [INFO] [stderr] [INFO] [stderr] warning: writing `&Vec<_>` instead of `&[_]` involves one more reference and cannot be used with non-Vec-based slices. [INFO] [stderr] --> src/db/sra/fastq.rs:61:29 [INFO] [stderr] | [INFO] [stderr] 61 | fn estimate_list_size(list: &RecordList) -> usize { [INFO] [stderr] | ^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#ptr_arg [INFO] [stderr] [INFO] [stderr] warning: this argument is passed by reference, but would be more efficient if passed by value [INFO] [stderr] --> src/db/uniprot/evidence.rs:52:20 [INFO] [stderr] | [INFO] [stderr] 52 | pub fn verbose(&self) -> &'static str { [INFO] [stderr] | ^^^^^ help: consider passing by value instead: `self` [INFO] [stderr] | [INFO] [stderr] = note: #[warn(clippy::trivially_copy_pass_by_ref)] on by default [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#trivially_copy_pass_by_ref [INFO] [stderr] [INFO] [stderr] warning: this argument is passed by reference, but would be more efficient if passed by value [INFO] [stderr] --> src/db/uniprot/evidence.rs:77:19 [INFO] [stderr] | [INFO] [stderr] 77 | pub fn to_int(&self) -> u8 { [INFO] [stderr] | ^^^^^ help: consider passing by value instead: `self` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#trivially_copy_pass_by_ref [INFO] [stderr] [INFO] [stderr] warning: this argument is passed by reference, but would be more efficient if passed by value [INFO] [stderr] --> src/db/uniprot/evidence.rs:93:22 [INFO] [stderr] | [INFO] [stderr] 93 | pub fn to_string(&self) -> String { [INFO] [stderr] | ^^^^^ help: consider passing by value instead: `self` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#trivially_copy_pass_by_ref [INFO] [stderr] [INFO] [stderr] warning: defining a method called `from_str` on this type; consider implementing the `std::str::FromStr` trait or choosing a less ambiguous name [INFO] [stderr] --> src/db/uniprot/evidence.rs:99:5 [INFO] [stderr] | [INFO] [stderr] 99 | / pub fn from_str(s: &str) -> ResultType { [INFO] [stderr] 100 | | ProteinEvidence::from_int(s.parse::()?) [INFO] [stderr] 101 | | } [INFO] [stderr] | |_____^ [INFO] [stderr] | [INFO] [stderr] = note: #[warn(clippy::should_implement_trait)] on by default [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#should_implement_trait [INFO] [stderr] [INFO] [stderr] warning: this argument is passed by reference, but would be more efficient if passed by value [INFO] [stderr] --> src/db/uniprot/evidence.rs:115:24 [INFO] [stderr] | [INFO] [stderr] 115 | pub fn xml_verbose(&self) -> &'static str { [INFO] [stderr] | ^^^^^ help: consider passing by value instead: `self` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#trivially_copy_pass_by_ref [INFO] [stderr] [INFO] [stderr] warning: you should consider adding a `Default` implementation for `db::uniprot::record::Record` [INFO] [stderr] --> src/db/uniprot/record.rs:162:5 [INFO] [stderr] | [INFO] [stderr] 162 | / pub fn new() -> Self { [INFO] [stderr] 163 | | Record { [INFO] [stderr] 164 | | sequence_version: 0, [INFO] [stderr] 165 | | protein_evidence: ProteinEvidence::Unknown, [INFO] [stderr] ... | [INFO] [stderr] 177 | | } [INFO] [stderr] 178 | | } [INFO] [stderr] | |_____^ [INFO] [stderr] | [INFO] [stderr] = note: #[warn(clippy::new_without_default)] on by default [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#new_without_default [INFO] [stderr] help: try this [INFO] [stderr] | [INFO] [stderr] 159 | impl Default for db::uniprot::record::Record { [INFO] [stderr] 160 | fn default() -> Self { [INFO] [stderr] 161 | Self::new() [INFO] [stderr] 162 | } [INFO] [stderr] 163 | } [INFO] [stderr] | [INFO] [stderr] [INFO] [stderr] warning: this argument is passed by reference, but would be more efficient if passed by value [INFO] [stderr] --> src/db/uniprot/section.rs:36:19 [INFO] [stderr] | [INFO] [stderr] 36 | pub fn to_int(&self) -> u8 { [INFO] [stderr] | ^^^^^ help: consider passing by value instead: `self` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#trivially_copy_pass_by_ref [INFO] [stderr] [INFO] [stderr] error: this comparison involving the minimum or maximum element for this type contains a case that is always true or always false [INFO] [stderr] --> src/db/uniprot/section.rs:43:12 [INFO] [stderr] | [INFO] [stderr] 43 | if int >= Self::MIN && int <= Self::MAX { [INFO] [stderr] | ^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: #[deny(clippy::absurd_extreme_comparisons)] on by default [INFO] [stderr] = help: because Self::MIN is the minimum value for this type, this comparison is always true [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#absurd_extreme_comparisons [INFO] [stderr] [INFO] [stderr] warning: this argument is passed by reference, but would be more efficient if passed by value [INFO] [stderr] --> src/db/uniprot/section.rs:52:22 [INFO] [stderr] | [INFO] [stderr] 52 | pub fn to_string(&self) -> String { [INFO] [stderr] | ^^^^^ help: consider passing by value instead: `self` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#trivially_copy_pass_by_ref [INFO] [stderr] [INFO] [stderr] warning: defining a method called `from_str` on this type; consider implementing the `std::str::FromStr` trait or choosing a less ambiguous name [INFO] [stderr] --> src/db/uniprot/section.rs:58:5 [INFO] [stderr] | [INFO] [stderr] 58 | / pub fn from_str(s: &str) -> ResultType { [INFO] [stderr] 59 | | Section::from_int(s.parse::()?) [INFO] [stderr] 60 | | } [INFO] [stderr] | |_____^ [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#should_implement_trait [INFO] [stderr] [INFO] [stderr] warning: you seem to be trying to match on a boolean expression [INFO] [stderr] --> src/db/uniprot/csv.rs:83:20 [INFO] [stderr] | [INFO] [stderr] 83 | let reviewed = match record.reviewed { [INFO] [stderr] | ____________________^ [INFO] [stderr] 84 | | true => "reviewed", [INFO] [stderr] 85 | | false => "unreviewed", [INFO] [stderr] 86 | | }; [INFO] [stderr] | |_____^ help: consider using an if/else expression: `if record.reviewed { "reviewed" } else { "unreviewed" }` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#match_bool [INFO] [stderr] [INFO] [stderr] warning: writing `&Vec<_>` instead of `&[_]` involves one more reference and cannot be used with non-Vec-based slices. [INFO] [stderr] --> src/db/uniprot/csv.rs:272:29 [INFO] [stderr] | [INFO] [stderr] 272 | fn estimate_list_size(list: &RecordList) -> usize { [INFO] [stderr] | ^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#ptr_arg [INFO] [stderr] [INFO] [stderr] warning: you seem to be trying to use match for destructuring a single pattern. Consider using `if let` [INFO] [stderr] --> src/db/uniprot/csv.rs:423:13 [INFO] [stderr] | [INFO] [stderr] 423 | / match self.parse_header() { [INFO] [stderr] 424 | | Err(e) => return Some(Err(e)), [INFO] [stderr] 425 | | _ => (), [INFO] [stderr] 426 | | } [INFO] [stderr] | |_____________^ help: try this: `if let Err(e) = self.parse_header() { return Some(Err(e)) }` [INFO] [stderr] | [INFO] [stderr] = note: #[warn(clippy::single_match)] on by default [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#single_match [INFO] [stderr] [INFO] [stderr] warning: writing `&Vec<_>` instead of `&[_]` involves one more reference and cannot be used with non-Vec-based slices. [INFO] [stderr] --> src/db/uniprot/fasta.rs:67:29 [INFO] [stderr] | [INFO] [stderr] 67 | fn estimate_list_size(list: &RecordList) -> usize { [INFO] [stderr] | ^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#ptr_arg [INFO] [stderr] [INFO] [stderr] warning: length comparison to zero [INFO] [stderr] --> src/db/uniprot/fasta.rs:349:8 [INFO] [stderr] | [INFO] [stderr] 349 | if record.sequence.len() > 0 { [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^ help: using `is_empty` is clearer and more explicit: `!record.sequence.is_empty()` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#len_zero [INFO] [stderr] [INFO] [stderr] warning: writing `&Vec<_>` instead of `&[_]` involves one more reference and cannot be used with non-Vec-based slices. [INFO] [stderr] --> src/db/uniprot/xml.rs:40:29 [INFO] [stderr] | [INFO] [stderr] 40 | fn estimate_list_size(list: &RecordList) -> usize { [INFO] [stderr] | ^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#ptr_arg [INFO] [stderr] [INFO] [stderr] warning: you seem to be trying to use match for destructuring a single pattern. Consider using `if let` [INFO] [stderr] --> src/db/uniprot/xml.rs:59:10 [INFO] [stderr] | [INFO] [stderr] 59 | / match $e? { [INFO] [stderr] 60 | | Err(e) => return Some(Err(e)), [INFO] [stderr] 61 | | _ => (), [INFO] [stderr] 62 | | } [INFO] [stderr] | |_________^ help: try this: `if let Err(e) = $e? { try_opterr!(self.reader.seek_start(b"accession", 2)); }` [INFO] [stderr] ... [INFO] [stderr] 155 | try_opterr!(self.reader.seek_start(b"accession", 2)); [INFO] [stderr] | ----------------------------------------------------- in this macro invocation [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#single_match [INFO] [stderr] [INFO] [stderr] warning: you seem to be trying to use match for destructuring a single pattern. Consider using `if let` [INFO] [stderr] --> src/db/uniprot/xml.rs:59:10 [INFO] [stderr] | [INFO] [stderr] 59 | / match $e? { [INFO] [stderr] 60 | | Err(e) => return Some(Err(e)), [INFO] [stderr] 61 | | _ => (), [INFO] [stderr] 62 | | } [INFO] [stderr] | |_________^ help: try this: `if let Err(e) = $e? { try_opterr!(self.reader.seek_start(b"name", 2)); }` [INFO] [stderr] ... [INFO] [stderr] 168 | try_opterr!(self.reader.seek_start(b"name", 2)); [INFO] [stderr] | ------------------------------------------------ in this macro invocation [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#single_match [INFO] [stderr] [INFO] [stderr] warning: you seem to be trying to use match for destructuring a single pattern. Consider using `if let` [INFO] [stderr] --> src/db/uniprot/xml.rs:59:10 [INFO] [stderr] | [INFO] [stderr] 59 | / match $e? { [INFO] [stderr] 60 | | Err(e) => return Some(Err(e)), [INFO] [stderr] 61 | | _ => (), [INFO] [stderr] 62 | | } [INFO] [stderr] | |_________^ help: try this: `if let Err(e) = $e? { try_opterr!(self.reader.seek_start(b"recommendedName", 3)); }` [INFO] [stderr] ... [INFO] [stderr] 183 | try_opterr!(self.reader.seek_start(b"recommendedName", 3)); [INFO] [stderr] | ----------------------------------------------------------- in this macro invocation [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#single_match [INFO] [stderr] [INFO] [stderr] warning: you seem to be trying to use match for destructuring a single pattern. Consider using `if let` [INFO] [stderr] --> src/db/uniprot/xml.rs:59:10 [INFO] [stderr] | [INFO] [stderr] 59 | / match $e? { [INFO] [stderr] 60 | | Err(e) => return Some(Err(e)), [INFO] [stderr] 61 | | _ => (), [INFO] [stderr] 62 | | } [INFO] [stderr] | |_________^ help: try this: `if let Err(e) = $e? { try_opterr!(self.reader.seek_start(b"fullName", 4)); }` [INFO] [stderr] ... [INFO] [stderr] 186 | try_opterr!(self.reader.seek_start(b"fullName", 4)); [INFO] [stderr] | ---------------------------------------------------- in this macro invocation [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#single_match [INFO] [stderr] [INFO] [stderr] warning: you seem to be trying to use match for destructuring a single pattern. Consider using `if let` [INFO] [stderr] --> src/db/uniprot/xml.rs:59:10 [INFO] [stderr] | [INFO] [stderr] 59 | / match $e? { [INFO] [stderr] 60 | | Err(e) => return Some(Err(e)), [INFO] [stderr] 61 | | _ => (), [INFO] [stderr] 62 | | } [INFO] [stderr] | |_________^ help: try this: `if let Err(e) = $e? { try_opterr!(self.reader.seek_start(b"submittedName", 3)); }` [INFO] [stderr] ... [INFO] [stderr] 198 | try_opterr!(self.reader.seek_start(b"submittedName", 3)); [INFO] [stderr] | --------------------------------------------------------- in this macro invocation [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#single_match [INFO] [stderr] [INFO] [stderr] warning: you seem to be trying to use match for destructuring a single pattern. Consider using `if let` [INFO] [stderr] --> src/db/uniprot/xml.rs:59:10 [INFO] [stderr] | [INFO] [stderr] 59 | / match $e? { [INFO] [stderr] 60 | | Err(e) => return Some(Err(e)), [INFO] [stderr] 61 | | _ => (), [INFO] [stderr] 62 | | } [INFO] [stderr] | |_________^ help: try this: `if let Err(e) = $e? { try_opterr!(self.reader.seek_start(b"fullName", 4)); }` [INFO] [stderr] ... [INFO] [stderr] 201 | try_opterr!(self.reader.seek_start(b"fullName", 4)); [INFO] [stderr] | ---------------------------------------------------- in this macro invocation [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#single_match [INFO] [stderr] [INFO] [stderr] warning: you seem to be trying to match on a boolean expression [INFO] [stderr] --> src/db/uniprot/xml.rs:213:9 [INFO] [stderr] | [INFO] [stderr] 213 | / match record.reviewed { [INFO] [stderr] 214 | | true => self.read_swissport_protein(record), [INFO] [stderr] 215 | | false => self.read_trembl_protein(record), [INFO] [stderr] 216 | | } [INFO] [stderr] | |_________^ help: consider using an if/else expression: `if record.reviewed { self.read_swissport_protein(record) } else { self.read_trembl_protein(record) }` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#match_bool [INFO] [stderr] [INFO] [stderr] warning: you seem to be trying to use match for destructuring a single pattern. Consider using `if let` [INFO] [stderr] --> src/db/uniprot/xml.rs:59:10 [INFO] [stderr] | [INFO] [stderr] 59 | / match $e? { [INFO] [stderr] 60 | | Err(e) => return Some(Err(e)), [INFO] [stderr] 61 | | _ => (), [INFO] [stderr] 62 | | } [INFO] [stderr] | |_________^ help: try this: `if let Err(e) = $e? { try_opterr!(self.read_gene_name(record)); }` [INFO] [stderr] ... [INFO] [stderr] 259 | try_opterr!(self.read_gene_name(record)); [INFO] [stderr] | ----------------------------------------- in this macro invocation [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#single_match [INFO] [stderr] [INFO] [stderr] warning: you seem to be trying to use match for destructuring a single pattern. Consider using `if let` [INFO] [stderr] --> src/db/uniprot/xml.rs:59:10 [INFO] [stderr] | [INFO] [stderr] 59 | / match $e? { [INFO] [stderr] 60 | | Err(e) => return Some(Err(e)), [INFO] [stderr] 61 | | _ => (), [INFO] [stderr] 62 | | } [INFO] [stderr] | |_________^ help: try this: `if let Err(e) = $e? { try_opterr!(self.read_organism_value(record)); }` [INFO] [stderr] ... [INFO] [stderr] 340 | try_opterr!(self.read_organism_value(record)); [INFO] [stderr] | ---------------------------------------------- in this macro invocation [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#single_match [INFO] [stderr] [INFO] [stderr] warning: you seem to be trying to use match for destructuring a single pattern. Consider using `if let` [INFO] [stderr] --> src/db/uniprot/xml.rs:59:10 [INFO] [stderr] | [INFO] [stderr] 59 | / match $e? { [INFO] [stderr] 60 | | Err(e) => return Some(Err(e)), [INFO] [stderr] 61 | | _ => (), [INFO] [stderr] 62 | | } [INFO] [stderr] | |_________^ help: try this: `if let Err(e) = $e? { try_opterr!(self.read_taxonomy(record)); }` [INFO] [stderr] ... [INFO] [stderr] 341 | try_opterr!(self.read_taxonomy(record)); [INFO] [stderr] | ---------------------------------------- in this macro invocation [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#single_match [INFO] [stderr] [INFO] [stderr] warning: you seem to be trying to use match for destructuring a single pattern. Consider using `if let` [INFO] [stderr] --> src/db/uniprot/xml.rs:59:10 [INFO] [stderr] | [INFO] [stderr] 59 | / match $e? { [INFO] [stderr] 60 | | Err(e) => return Some(Err(e)), [INFO] [stderr] 61 | | _ => (), [INFO] [stderr] 62 | | } [INFO] [stderr] | |_________^ help: try this: `if let Err(e) = $e? { try_opterr!(self.read_gene_inside(record)); }` [INFO] [stderr] ... [INFO] [stderr] 361 | try_opterr!(self.read_gene_inside(record)); [INFO] [stderr] | ------------------------------------------- in this macro invocation [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#single_match [INFO] [stderr] [INFO] [stderr] warning: you seem to be trying to use match for destructuring a single pattern. Consider using `if let` [INFO] [stderr] --> src/db/uniprot/xml.rs:59:10 [INFO] [stderr] | [INFO] [stderr] 59 | / match $e? { [INFO] [stderr] 60 | | Err(e) => return Some(Err(e)), [INFO] [stderr] 61 | | _ => (), [INFO] [stderr] 62 | | } [INFO] [stderr] | |_________^ help: try this: `if let Err(e) = $e? { try_opterr!(self.reader.seek_start(b"organism", 2)); }` [INFO] [stderr] ... [INFO] [stderr] 362 | try_opterr!(self.reader.seek_start(b"organism", 2)); [INFO] [stderr] | ---------------------------------------------------- in this macro invocation [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#single_match [INFO] [stderr] [INFO] [stderr] warning: single-character string constant used as pattern [INFO] [stderr] --> src/db/uniprot/xml.rs:469:33 [INFO] [stderr] | [INFO] [stderr] 469 | v.split("\n").for_each(|s| sequence.append(&mut s.as_bytes().to_vec())); [INFO] [stderr] | ^^^^ help: try using a char instead: `'\n'` [INFO] [stderr] | [INFO] [stderr] = note: #[warn(clippy::single_char_pattern)] on by default [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#single_char_pattern [INFO] [stderr] [INFO] [stderr] warning: you seem to be trying to use match for destructuring a single pattern. Consider using `if let` [INFO] [stderr] --> src/db/uniprot/xml.rs:59:10 [INFO] [stderr] | [INFO] [stderr] 59 | / match $e? { [INFO] [stderr] 60 | | Err(e) => return Some(Err(e)), [INFO] [stderr] 61 | | _ => (), [INFO] [stderr] 62 | | } [INFO] [stderr] | |_________^ help: try this: `if let Err(e) = $e? { try_opterr!(self.read_accession(record)); }` [INFO] [stderr] ... [INFO] [stderr] 480 | try_opterr!(self.read_accession(record)); [INFO] [stderr] | ----------------------------------------- in this macro invocation [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#single_match [INFO] [stderr] [INFO] [stderr] warning: you seem to be trying to use match for destructuring a single pattern. Consider using `if let` [INFO] [stderr] --> src/db/uniprot/xml.rs:59:10 [INFO] [stderr] | [INFO] [stderr] 59 | / match $e? { [INFO] [stderr] 60 | | Err(e) => return Some(Err(e)), [INFO] [stderr] 61 | | _ => (), [INFO] [stderr] 62 | | } [INFO] [stderr] | |_________^ help: try this: `if let Err(e) = $e? { try_opterr!(self.read_mnemonic(record)); }` [INFO] [stderr] ... [INFO] [stderr] 481 | try_opterr!(self.read_mnemonic(record)); [INFO] [stderr] | ---------------------------------------- in this macro invocation [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#single_match [INFO] [stderr] [INFO] [stderr] warning: you seem to be trying to use match for destructuring a single pattern. Consider using `if let` [INFO] [stderr] --> src/db/uniprot/xml.rs:59:10 [INFO] [stderr] | [INFO] [stderr] 59 | / match $e? { [INFO] [stderr] 60 | | Err(e) => return Some(Err(e)), [INFO] [stderr] 61 | | _ => (), [INFO] [stderr] 62 | | } [INFO] [stderr] | |_________^ help: try this: `if let Err(e) = $e? { try_opterr!(self.read_protein(record)); }` [INFO] [stderr] ... [INFO] [stderr] 482 | try_opterr!(self.read_protein(record)); [INFO] [stderr] | --------------------------------------- in this macro invocation [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#single_match [INFO] [stderr] [INFO] [stderr] warning: you seem to be trying to use match for destructuring a single pattern. Consider using `if let` [INFO] [stderr] --> src/db/uniprot/xml.rs:59:10 [INFO] [stderr] | [INFO] [stderr] 59 | / match $e? { [INFO] [stderr] 60 | | Err(e) => return Some(Err(e)), [INFO] [stderr] 61 | | _ => (), [INFO] [stderr] 62 | | } [INFO] [stderr] | |_________^ help: try this: `if let Err(e) = $e? { try_opterr!(self.read_gene_or_organism(record)); }` [INFO] [stderr] ... [INFO] [stderr] 483 | try_opterr!(self.read_gene_or_organism(record)); [INFO] [stderr] | ------------------------------------------------ in this macro invocation [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#single_match [INFO] [stderr] [INFO] [stderr] warning: you seem to be trying to use match for destructuring a single pattern. Consider using `if let` [INFO] [stderr] --> src/db/uniprot/xml.rs:59:10 [INFO] [stderr] | [INFO] [stderr] 59 | / match $e? { [INFO] [stderr] 60 | | Err(e) => return Some(Err(e)), [INFO] [stderr] 61 | | _ => (), [INFO] [stderr] 62 | | } [INFO] [stderr] | |_________^ help: try this: `if let Err(e) = $e? { try_opterr!(self.read_proteome(record)); }` [INFO] [stderr] ... [INFO] [stderr] 485 | try_opterr!(self.read_proteome(record)); [INFO] [stderr] | ---------------------------------------- in this macro invocation [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#single_match [INFO] [stderr] [INFO] [stderr] warning: you seem to be trying to use match for destructuring a single pattern. Consider using `if let` [INFO] [stderr] --> src/db/uniprot/xml.rs:59:10 [INFO] [stderr] | [INFO] [stderr] 59 | / match $e? { [INFO] [stderr] 60 | | Err(e) => return Some(Err(e)), [INFO] [stderr] 61 | | _ => (), [INFO] [stderr] 62 | | } [INFO] [stderr] | |_________^ help: try this: `if let Err(e) = $e? { try_opterr!(self.read_evidence(record)); }` [INFO] [stderr] ... [INFO] [stderr] 487 | try_opterr!(self.read_evidence(record)); [INFO] [stderr] | ---------------------------------------- in this macro invocation [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#single_match [INFO] [stderr] [INFO] [stderr] warning: you seem to be trying to use match for destructuring a single pattern. Consider using `if let` [INFO] [stderr] --> src/db/uniprot/xml.rs:59:10 [INFO] [stderr] | [INFO] [stderr] 59 | / match $e? { [INFO] [stderr] 60 | | Err(e) => return Some(Err(e)), [INFO] [stderr] 61 | | _ => (), [INFO] [stderr] 62 | | } [INFO] [stderr] | |_________^ help: try this: `if let Err(e) = $e? { try_opterr!(self.read_sequence(record)); }` [INFO] [stderr] ... [INFO] [stderr] 488 | try_opterr!(self.read_sequence(record)); [INFO] [stderr] | ---------------------------------------- in this macro invocation [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#single_match [INFO] [stderr] [INFO] [stderr] warning: you seem to be trying to use match for destructuring a single pattern. Consider using `if let` [INFO] [stderr] --> src/db/uniprot/xml.rs:59:10 [INFO] [stderr] | [INFO] [stderr] 59 | / match $e? { [INFO] [stderr] 60 | | Err(e) => return Some(Err(e)), [INFO] [stderr] 61 | | _ => (), [INFO] [stderr] 62 | | } [INFO] [stderr] | |_________^ help: try this: `if let Err(e) = $e? { try_opterr!(self.parse_record(&mut record)); }` [INFO] [stderr] ... [INFO] [stderr] 505 | try_opterr!(self.parse_record(&mut record)); [INFO] [stderr] | -------------------------------------------- in this macro invocation [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#single_match [INFO] [stderr] [INFO] [stderr] warning: you seem to be trying to use match for destructuring a single pattern. Consider using `if let` [INFO] [stderr] --> src/db/uniprot/xml.rs:510:24 [INFO] [stderr] | [INFO] [stderr] 510 | Some(v) => match v { [INFO] [stderr] | ________________________^ [INFO] [stderr] 511 | | Err(e) => return Some(Err(e)), [INFO] [stderr] 512 | | _ => (), [INFO] [stderr] 513 | | }, [INFO] [stderr] | |_____________^ help: try this: `if let Err(e) = v { return Some(Err(e)) }` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#single_match [INFO] [stderr] [INFO] [stderr] warning: you seem to be trying to match on a boolean expression [INFO] [stderr] --> src/db/uniprot/xml.rs:593:9 [INFO] [stderr] | [INFO] [stderr] 593 | / match record.reviewed { [INFO] [stderr] 594 | | true => self.writer.write_start_element(b"entry", &[ [INFO] [stderr] 595 | | (b"dataset", b"Swiss-Prot"), [INFO] [stderr] 596 | | ]), [INFO] [stderr] ... | [INFO] [stderr] 599 | | ]), [INFO] [stderr] 600 | | } [INFO] [stderr] | |_________^ [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#match_bool [INFO] [stderr] help: consider using an if/else expression [INFO] [stderr] | [INFO] [stderr] 593 | if record.reviewed { self.writer.write_start_element(b"entry", &[ [INFO] [stderr] 594 | (b"dataset", b"Swiss-Prot"), [INFO] [stderr] 595 | ]) } else { self.writer.write_start_element(b"entry", &[ [INFO] [stderr] 596 | (b"dataset", b"TrEMBL"), [INFO] [stderr] 597 | ]) } [INFO] [stderr] | [INFO] [stderr] [INFO] [stderr] warning: you seem to be trying to match on a boolean expression [INFO] [stderr] --> src/db/uniprot/xml.rs:625:9 [INFO] [stderr] | [INFO] [stderr] 625 | / match record.reviewed { [INFO] [stderr] 626 | | true => self.write_recommended_name(record)?, [INFO] [stderr] 627 | | false => self.write_submitted_name(record)?, [INFO] [stderr] 628 | | }; [INFO] [stderr] | |_________^ help: consider using an if/else expression: `if record.reviewed { self.write_recommended_name(record)? } else { self.write_submitted_name(record)? }` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#match_bool [INFO] [stderr] [INFO] [stderr] warning: writing `&Vec<_>` instead of `&[_]` involves one more reference and cannot be used with non-Vec-based slices. [INFO] [stderr] --> src/io/uniprot.rs:35:28 [INFO] [stderr] | [INFO] [stderr] 35 | pub fn to_string(list: &RecordList) -> ResultType { [INFO] [stderr] | ^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#ptr_arg [INFO] [stderr] [INFO] [stderr] warning: methods called `to_*` usually take self by reference; consider choosing a less ambiguous name [INFO] [stderr] --> src/io/uniprot.rs:35:22 [INFO] [stderr] | [INFO] [stderr] 35 | pub fn to_string(list: &RecordList) -> ResultType { [INFO] [stderr] | ^^^^ [INFO] [stderr] | [INFO] [stderr] = note: #[warn(clippy::wrong_self_convention)] on by default [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#wrong_self_convention [INFO] [stderr] [INFO] [stderr] warning: writing `&Vec<_>` instead of `&[_]` involves one more reference and cannot be used with non-Vec-based slices. [INFO] [stderr] --> src/io/uniprot.rs:41:42 [INFO] [stderr] | [INFO] [stderr] 41 | pub fn to_file>(list: &RecordList, path: P) -> ResultType<()> { [INFO] [stderr] | ^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#ptr_arg [INFO] [stderr] [INFO] [stderr] warning: methods called `to_*` usually take self by reference; consider choosing a less ambiguous name [INFO] [stderr] --> src/io/uniprot.rs:41:36 [INFO] [stderr] | [INFO] [stderr] 41 | pub fn to_file>(list: &RecordList, path: P) -> ResultType<()> { [INFO] [stderr] | ^^^^ [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#wrong_self_convention [INFO] [stderr] [INFO] [stderr] warning: writing `&Vec<_>` instead of `&[_]` involves one more reference and cannot be used with non-Vec-based slices. [INFO] [stderr] --> src/io/uniprot.rs:66:28 [INFO] [stderr] | [INFO] [stderr] 66 | pub fn to_string(list: &RecordList) -> ResultType { [INFO] [stderr] | ^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#ptr_arg [INFO] [stderr] [INFO] [stderr] warning: methods called `to_*` usually take self by reference; consider choosing a less ambiguous name [INFO] [stderr] --> src/io/uniprot.rs:66:22 [INFO] [stderr] | [INFO] [stderr] 66 | pub fn to_string(list: &RecordList) -> ResultType { [INFO] [stderr] | ^^^^ [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#wrong_self_convention [INFO] [stderr] [INFO] [stderr] warning: writing `&Vec<_>` instead of `&[_]` involves one more reference and cannot be used with non-Vec-based slices. [INFO] [stderr] --> src/io/uniprot.rs:72:42 [INFO] [stderr] | [INFO] [stderr] 72 | pub fn to_file>(list: &RecordList, path: P) -> ResultType<()> { [INFO] [stderr] | ^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#ptr_arg [INFO] [stderr] [INFO] [stderr] warning: methods called `to_*` usually take self by reference; consider choosing a less ambiguous name [INFO] [stderr] --> src/io/uniprot.rs:72:36 [INFO] [stderr] | [INFO] [stderr] 72 | pub fn to_file>(list: &RecordList, path: P) -> ResultType<()> { [INFO] [stderr] | ^^^^ [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#wrong_self_convention [INFO] [stderr] [INFO] [stderr] warning: writing `&Vec<_>` instead of `&[_]` involves one more reference and cannot be used with non-Vec-based slices. [INFO] [stderr] --> src/io/uniprot.rs:97:28 [INFO] [stderr] | [INFO] [stderr] 97 | pub fn to_string(list: &RecordList) -> ResultType { [INFO] [stderr] | ^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#ptr_arg [INFO] [stderr] [INFO] [stderr] warning: methods called `to_*` usually take self by reference; consider choosing a less ambiguous name [INFO] [stderr] --> src/io/uniprot.rs:97:22 [INFO] [stderr] | [INFO] [stderr] 97 | pub fn to_string(list: &RecordList) -> ResultType { [INFO] [stderr] | ^^^^ [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#wrong_self_convention [INFO] [stderr] [INFO] [stderr] warning: writing `&Vec<_>` instead of `&[_]` involves one more reference and cannot be used with non-Vec-based slices. [INFO] [stderr] --> src/io/uniprot.rs:103:42 [INFO] [stderr] | [INFO] [stderr] 103 | pub fn to_file>(list: &RecordList, path: P) -> ResultType<()> { [INFO] [stderr] | ^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#ptr_arg [INFO] [stderr] [INFO] [stderr] warning: methods called `to_*` usually take self by reference; consider choosing a less ambiguous name [INFO] [stderr] --> src/io/uniprot.rs:103:36 [INFO] [stderr] | [INFO] [stderr] 103 | pub fn to_file>(list: &RecordList, path: P) -> ResultType<()> { [INFO] [stderr] | ^^^^ [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#wrong_self_convention [INFO] [stderr] [INFO] [stderr] error: aborting due to previous error [INFO] [stderr] [INFO] [stderr] error: Could not compile `bdb`. [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] warning: you seem to be trying to match on a boolean expression [INFO] [stderr] --> src/util/iterator.rs:33:13 [INFO] [stderr] | [INFO] [stderr] 33 | / match r.is_valid() { [INFO] [stderr] 34 | | true => Ok(r), [INFO] [stderr] 35 | | false => Err(From::from(ErrorKind::InvalidRecord)), [INFO] [stderr] 36 | | } [INFO] [stderr] | |_____________^ help: consider using an if/else expression: `if r.is_valid() { Ok(r) } else { Err(From::from(ErrorKind::InvalidRecord)) }` [INFO] [stderr] | [INFO] [stderr] = note: #[warn(clippy::match_bool)] on by default [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#match_bool [INFO] [stderr] [INFO] [stderr] warning: length comparison to zero [INFO] [stderr] --> src/util/iterator.rs:372:19 [INFO] [stderr] | [INFO] [stderr] 372 | } else if buf.len() > 0 && line.starts_with(start) { [INFO] [stderr] | ^^^^^^^^^^^^^ help: using `is_empty` is clearer and more explicit: `!buf.is_empty()` [INFO] [stderr] | [INFO] [stderr] = note: #[warn(clippy::len_zero)] on by default [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#len_zero [INFO] [stderr] [INFO] [stderr] warning: this lifetime isn't used in the function definition [INFO] [stderr] --> src/util/xml.rs:499:25 [INFO] [stderr] | [INFO] [stderr] 499 | fn new_text_element<'a>(text: &[u8]) -> BytesText { [INFO] [stderr] | ^^ [INFO] [stderr] | [INFO] [stderr] = note: #[warn(clippy::extra_unused_lifetimes)] on by default [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#extra_unused_lifetimes [INFO] [stderr] [INFO] [stderr] error: strict comparison of f32 or f64 [INFO] [stderr] --> src/bio/proteins.rs:185:13 [INFO] [stderr] | [INFO] [stderr] 185 | assert_eq!(T::residue_mass(a), T::residue_mass(lower(a))); [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: #[deny(clippy::float_cmp)] on by default [INFO] [stderr] note: std::f32::EPSILON and std::f64::EPSILON are available. [INFO] [stderr] --> src/bio/proteins.rs:185:13 [INFO] [stderr] | [INFO] [stderr] 185 | assert_eq!(T::residue_mass(a), T::residue_mass(lower(a))); [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#float_cmp [INFO] [stderr] = note: this error originates in a macro outside of the current crate (in Nightly builds, run with -Z external-macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] error: strict comparison of f32 or f64 [INFO] [stderr] --> src/bio/proteins.rs:186:13 [INFO] [stderr] | [INFO] [stderr] 186 | assert_eq!(T::aminoacid_mass(a), T::aminoacid_mass(lower(a))); [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] note: std::f32::EPSILON and std::f64::EPSILON are available. [INFO] [stderr] --> src/bio/proteins.rs:186:13 [INFO] [stderr] | [INFO] [stderr] 186 | assert_eq!(T::aminoacid_mass(a), T::aminoacid_mass(lower(a))); [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#float_cmp [INFO] [stderr] = note: this error originates in a macro outside of the current crate (in Nightly builds, run with -Z external-macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: you should consider deriving a `Default` implementation for `db::mass_spectra::peak::Peak` [INFO] [stderr] --> src/db/mass_spectra/peak.rs:17:5 [INFO] [stderr] | [INFO] [stderr] 17 | / pub fn new() -> Self { [INFO] [stderr] 18 | | Peak { [INFO] [stderr] 19 | | mz: 0.0, [INFO] [stderr] 20 | | intensity: 0.0, [INFO] [stderr] 21 | | z: 0, [INFO] [stderr] 22 | | } [INFO] [stderr] 23 | | } [INFO] [stderr] | |_____^ [INFO] [stderr] | [INFO] [stderr] = note: #[warn(clippy::new_without_default_derive)] on by default [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#new_without_default_derive [INFO] [stderr] help: try this [INFO] [stderr] | [INFO] [stderr] 5 | #[derive(Default)] [INFO] [stderr] | [INFO] [stderr] [INFO] [stderr] warning: the function has a cyclomatic complexity of 29 [INFO] [stderr] --> src/db/mass_spectra/re.rs:724:5 [INFO] [stderr] | [INFO] [stderr] 724 | / fn msconvert_mgf_pepmass_regex_test() { [INFO] [stderr] 725 | | type T = MsConvertMgfPepMassRegex; [INFO] [stderr] 726 | | [INFO] [stderr] 727 | | // empty [INFO] [stderr] ... | [INFO] [stderr] 749 | | extract_regex!(T, "PEPMASS=775 170643.953125", 2, "170643.953125", as_str); [INFO] [stderr] 750 | | } [INFO] [stderr] | |_____^ [INFO] [stderr] | [INFO] [stderr] = note: #[warn(clippy::cyclomatic_complexity)] on by default [INFO] [stderr] = help: you could split it up into multiple smaller functions [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#cyclomatic_complexity [INFO] [stderr] [INFO] [stderr] warning: the function has a cyclomatic complexity of 29 [INFO] [stderr] --> src/db/mass_spectra/re.rs:797:5 [INFO] [stderr] | [INFO] [stderr] 797 | / fn pava_mgf_pepmass_regex_test() { [INFO] [stderr] 798 | | type T = PavaMgfPepMassRegex; [INFO] [stderr] 799 | | [INFO] [stderr] 800 | | // empty [INFO] [stderr] ... | [INFO] [stderr] 822 | | extract_regex!(T, "PEPMASS=775\t170643.953125", 2, "170643.953125", as_str); [INFO] [stderr] 823 | | } [INFO] [stderr] | |_____^ [INFO] [stderr] | [INFO] [stderr] = help: you could split it up into multiple smaller functions [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#cyclomatic_complexity [INFO] [stderr] [INFO] [stderr] warning: the function has a cyclomatic complexity of 29 [INFO] [stderr] --> src/db/mass_spectra/re.rs:868:5 [INFO] [stderr] | [INFO] [stderr] 868 | / fn pwiz_mgf_pepmass_regex_test() { [INFO] [stderr] 869 | | type T = PwizMgfPepMassRegex; [INFO] [stderr] 870 | | [INFO] [stderr] 871 | | // empty [INFO] [stderr] ... | [INFO] [stderr] 893 | | extract_regex!(T, "PEPMASS=775 170643.953125", 2, "170643.953125", as_str); [INFO] [stderr] 894 | | } [INFO] [stderr] | |_____^ [INFO] [stderr] | [INFO] [stderr] = help: you could split it up into multiple smaller functions [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#cyclomatic_complexity [INFO] [stderr] [INFO] [stderr] warning: you should consider deriving a `Default` implementation for `db::mass_spectra::record::Record` [INFO] [stderr] --> src/db/mass_spectra/record.rs:35:5 [INFO] [stderr] | [INFO] [stderr] 35 | / pub fn new() -> Self { [INFO] [stderr] 36 | | Record { [INFO] [stderr] 37 | | num: 0, [INFO] [stderr] 38 | | ms_level: 0, [INFO] [stderr] ... | [INFO] [stderr] 48 | | } [INFO] [stderr] 49 | | } [INFO] [stderr] | |_____^ [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#new_without_default_derive [INFO] [stderr] help: try this [INFO] [stderr] | [INFO] [stderr] 7 | #[derive(Default)] [INFO] [stderr] | [INFO] [stderr] [INFO] [stderr] warning: The function/method `len` doesn't need a mutable reference [INFO] [stderr] --> src/db/mass_spectra/mgf.rs:45:38 [INFO] [stderr] | [INFO] [stderr] 45 | text_next!(&mut self.reader, &mut self.buf, &mut self.line, unsafe { [INFO] [stderr] | ^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: #[warn(clippy::unnecessary_mut_passed)] on by default [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unnecessary_mut_passed [INFO] [stderr] [INFO] [stderr] warning: length comparison to zero [INFO] [stderr] --> src/db/mass_spectra/mgf.rs:50:23 [INFO] [stderr] | [INFO] [stderr] 50 | } else if self.buf.len() > 0 && self.line.starts_with(self.start) { [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^ help: using `is_empty` is clearer and more explicit: `!self.buf.is_empty()` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#len_zero [INFO] [stderr] [INFO] [stderr] warning: writing `&Vec<_>` instead of `&[_]` involves one more reference and cannot be used with non-Vec-based slices. [INFO] [stderr] --> src/db/mass_spectra/mgf.rs:80:29 [INFO] [stderr] | [INFO] [stderr] 80 | fn estimate_list_size(list: &RecordList, kind: MgfKind) -> usize { [INFO] [stderr] | ^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: #[warn(clippy::ptr_arg)] on by default [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#ptr_arg [INFO] [stderr] [INFO] [stderr] warning: you should consider deriving a `Default` implementation for `db::sra::record::Record` [INFO] [stderr] --> src/db/sra/record.rs:21:5 [INFO] [stderr] | [INFO] [stderr] 21 | / pub fn new() -> Self { [INFO] [stderr] 22 | | Record { [INFO] [stderr] 23 | | seq_id: String::new(), [INFO] [stderr] 24 | | description: String::new(), [INFO] [stderr] ... | [INFO] [stderr] 28 | | } [INFO] [stderr] 29 | | } [INFO] [stderr] | |_____^ [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#new_without_default_derive [INFO] [stderr] help: try this [INFO] [stderr] | [INFO] [stderr] 5 | #[derive(Default)] [INFO] [stderr] | [INFO] [stderr] [INFO] [stderr] warning: writing `&Vec<_>` instead of `&[_]` involves one more reference and cannot be used with non-Vec-based slices. [INFO] [stderr] --> src/db/sra/fastq.rs:61:29 [INFO] [stderr] | [INFO] [stderr] 61 | fn estimate_list_size(list: &RecordList) -> usize { [INFO] [stderr] | ^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#ptr_arg [INFO] [stderr] [INFO] [stderr] warning: this argument is passed by reference, but would be more efficient if passed by value [INFO] [stderr] --> src/db/uniprot/evidence.rs:52:20 [INFO] [stderr] | [INFO] [stderr] 52 | pub fn verbose(&self) -> &'static str { [INFO] [stderr] | ^^^^^ help: consider passing by value instead: `self` [INFO] [stderr] | [INFO] [stderr] = note: #[warn(clippy::trivially_copy_pass_by_ref)] on by default [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#trivially_copy_pass_by_ref [INFO] [stderr] [INFO] [stderr] warning: this argument is passed by reference, but would be more efficient if passed by value [INFO] [stderr] --> src/db/uniprot/evidence.rs:77:19 [INFO] [stderr] | [INFO] [stderr] 77 | pub fn to_int(&self) -> u8 { [INFO] [stderr] | ^^^^^ help: consider passing by value instead: `self` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#trivially_copy_pass_by_ref [INFO] [stderr] [INFO] [stderr] warning: this argument is passed by reference, but would be more efficient if passed by value [INFO] [stderr] --> src/db/uniprot/evidence.rs:93:22 [INFO] [stderr] | [INFO] [stderr] 93 | pub fn to_string(&self) -> String { [INFO] [stderr] | ^^^^^ help: consider passing by value instead: `self` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#trivially_copy_pass_by_ref [INFO] [stderr] [INFO] [stderr] warning: defining a method called `from_str` on this type; consider implementing the `std::str::FromStr` trait or choosing a less ambiguous name [INFO] [stderr] --> src/db/uniprot/evidence.rs:99:5 [INFO] [stderr] | [INFO] [stderr] 99 | / pub fn from_str(s: &str) -> ResultType { [INFO] [stderr] 100 | | ProteinEvidence::from_int(s.parse::()?) [INFO] [stderr] 101 | | } [INFO] [stderr] | |_____^ [INFO] [stderr] | [INFO] [stderr] = note: #[warn(clippy::should_implement_trait)] on by default [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#should_implement_trait [INFO] [stderr] [INFO] [stderr] warning: this argument is passed by reference, but would be more efficient if passed by value [INFO] [stderr] --> src/db/uniprot/evidence.rs:115:24 [INFO] [stderr] | [INFO] [stderr] 115 | pub fn xml_verbose(&self) -> &'static str { [INFO] [stderr] | ^^^^^ help: consider passing by value instead: `self` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#trivially_copy_pass_by_ref [INFO] [stderr] [INFO] [stderr] warning: the function has a cyclomatic complexity of 36 [INFO] [stderr] --> src/db/uniprot/re.rs:521:5 [INFO] [stderr] | [INFO] [stderr] 521 | / fn accession_regex() { [INFO] [stderr] 522 | | type T = AccessionRegex; [INFO] [stderr] 523 | | [INFO] [stderr] 524 | | // empty [INFO] [stderr] ... | [INFO] [stderr] 553 | | extract_regex!(T, "A0A022YWF9", 1, "A0A022YWF9", as_str); [INFO] [stderr] 554 | | } [INFO] [stderr] | |_____^ [INFO] [stderr] | [INFO] [stderr] = help: you could split it up into multiple smaller functions [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#cyclomatic_complexity [INFO] [stderr] [INFO] [stderr] warning: the function has a cyclomatic complexity of 38 [INFO] [stderr] --> src/db/uniprot/re.rs:557:5 [INFO] [stderr] | [INFO] [stderr] 557 | / fn mnemonic_regex() { [INFO] [stderr] 558 | | type T = MnemonicRegex; [INFO] [stderr] 559 | | [INFO] [stderr] 560 | | // empty [INFO] [stderr] ... | [INFO] [stderr] 589 | | extract_regex!(T, "G3P_RABIT", 3, "RABIT", as_str); [INFO] [stderr] 590 | | } [INFO] [stderr] | |_____^ [INFO] [stderr] | [INFO] [stderr] = help: you could split it up into multiple smaller functions [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#cyclomatic_complexity [INFO] [stderr] [INFO] [stderr] warning: the function has a cyclomatic complexity of 28 [INFO] [stderr] --> src/db/uniprot/re.rs:593:5 [INFO] [stderr] | [INFO] [stderr] 593 | / fn gene_regex() { [INFO] [stderr] 594 | | type T = GeneRegex; [INFO] [stderr] 595 | | [INFO] [stderr] 596 | | // empty [INFO] [stderr] ... | [INFO] [stderr] 618 | | extract_regex!(T, "dopamine D4 receptor/ DRD4", 1, "dopamine D4 receptor/ DRD4", as_str); [INFO] [stderr] 619 | | } [INFO] [stderr] | |_____^ [INFO] [stderr] | [INFO] [stderr] = help: you could split it up into multiple smaller functions [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#cyclomatic_complexity [INFO] [stderr] [INFO] [stderr] warning: the function has a cyclomatic complexity of 41 [INFO] [stderr] --> src/db/uniprot/re.rs:694:5 [INFO] [stderr] | [INFO] [stderr] 694 | / fn swissprot_header_regex() { [INFO] [stderr] 695 | | type T = SwissProtHeaderRegex; [INFO] [stderr] 696 | | [INFO] [stderr] 697 | | // empty [INFO] [stderr] ... | [INFO] [stderr] 735 | | extract_regex!(T, ENH1, T::SV_INDEX, "1", as_str); [INFO] [stderr] 736 | | } [INFO] [stderr] | |_____^ [INFO] [stderr] | [INFO] [stderr] = help: you could split it up into multiple smaller functions [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#cyclomatic_complexity [INFO] [stderr] [INFO] [stderr] warning: the function has a cyclomatic complexity of 31 [INFO] [stderr] --> src/db/uniprot/re.rs:739:5 [INFO] [stderr] | [INFO] [stderr] 739 | / fn trembl_header_regex() { [INFO] [stderr] 740 | | type T = TrEMBLHeaderRegex; [INFO] [stderr] 741 | | [INFO] [stderr] 742 | | // empty [INFO] [stderr] ... | [INFO] [stderr] 768 | | extract_regex!(T, O14861, T::SV_INDEX, "1", as_str); [INFO] [stderr] 769 | | } [INFO] [stderr] | |_____^ [INFO] [stderr] | [INFO] [stderr] = help: you could split it up into multiple smaller functions [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#cyclomatic_complexity [INFO] [stderr] [INFO] [stderr] warning: you should consider adding a `Default` implementation for `db::uniprot::record::Record` [INFO] [stderr] --> src/db/uniprot/record.rs:162:5 [INFO] [stderr] | [INFO] [stderr] 162 | / pub fn new() -> Self { [INFO] [stderr] 163 | | Record { [INFO] [stderr] 164 | | sequence_version: 0, [INFO] [stderr] 165 | | protein_evidence: ProteinEvidence::Unknown, [INFO] [stderr] ... | [INFO] [stderr] 177 | | } [INFO] [stderr] 178 | | } [INFO] [stderr] | |_____^ [INFO] [stderr] | [INFO] [stderr] = note: #[warn(clippy::new_without_default)] on by default [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#new_without_default [INFO] [stderr] help: try this [INFO] [stderr] | [INFO] [stderr] 159 | impl Default for db::uniprot::record::Record { [INFO] [stderr] 160 | fn default() -> Self { [INFO] [stderr] 161 | Self::new() [INFO] [stderr] 162 | } [INFO] [stderr] 163 | } [INFO] [stderr] | [INFO] [stderr] [INFO] [stderr] warning: the function has a cyclomatic complexity of 77 [INFO] [stderr] --> src/db/uniprot/record.rs:210:5 [INFO] [stderr] | [INFO] [stderr] 210 | / fn properties_record() { [INFO] [stderr] 211 | | // test various permutations that can lead to [INFO] [stderr] 212 | | // invalid or incomplete identifications [INFO] [stderr] 213 | | let g1 = gapdh(); [INFO] [stderr] ... | [INFO] [stderr] 367 | | g2.sequence = g1.sequence.clone(); [INFO] [stderr] 368 | | } [INFO] [stderr] | |_____^ [INFO] [stderr] | [INFO] [stderr] = help: you could split it up into multiple smaller functions [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#cyclomatic_complexity [INFO] [stderr] [INFO] [stderr] warning: the function has a cyclomatic complexity of 28 [INFO] [stderr] --> src/db/uniprot/record_list.rs:147:5 [INFO] [stderr] | [INFO] [stderr] 147 | / fn csv_list() { [INFO] [stderr] 148 | | let v: RecordList = vec![gapdh(), bsa()]; [INFO] [stderr] 149 | | [INFO] [stderr] 150 | | // to_csv (valid, 2 items) [INFO] [stderr] ... | [INFO] [stderr] 223 | | assert_eq!(z.len(), 1); [INFO] [stderr] 224 | | } [INFO] [stderr] | |_____^ [INFO] [stderr] | [INFO] [stderr] = help: you could split it up into multiple smaller functions [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#cyclomatic_complexity [INFO] [stderr] [INFO] [stderr] warning: this argument is passed by reference, but would be more efficient if passed by value [INFO] [stderr] --> src/db/uniprot/section.rs:36:19 [INFO] [stderr] | [INFO] [stderr] 36 | pub fn to_int(&self) -> u8 { [INFO] [stderr] | ^^^^^ help: consider passing by value instead: `self` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#trivially_copy_pass_by_ref [INFO] [stderr] [INFO] [stderr] error: this comparison involving the minimum or maximum element for this type contains a case that is always true or always false [INFO] [stderr] --> src/db/uniprot/section.rs:43:12 [INFO] [stderr] | [INFO] [stderr] 43 | if int >= Self::MIN && int <= Self::MAX { [INFO] [stderr] | ^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: #[deny(clippy::absurd_extreme_comparisons)] on by default [INFO] [stderr] = help: because Self::MIN is the minimum value for this type, this comparison is always true [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#absurd_extreme_comparisons [INFO] [stderr] [INFO] [stderr] warning: this argument is passed by reference, but would be more efficient if passed by value [INFO] [stderr] --> src/db/uniprot/section.rs:52:22 [INFO] [stderr] | [INFO] [stderr] 52 | pub fn to_string(&self) -> String { [INFO] [stderr] | ^^^^^ help: consider passing by value instead: `self` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#trivially_copy_pass_by_ref [INFO] [stderr] [INFO] [stderr] warning: defining a method called `from_str` on this type; consider implementing the `std::str::FromStr` trait or choosing a less ambiguous name [INFO] [stderr] --> src/db/uniprot/section.rs:58:5 [INFO] [stderr] | [INFO] [stderr] 58 | / pub fn from_str(s: &str) -> ResultType { [INFO] [stderr] 59 | | Section::from_int(s.parse::()?) [INFO] [stderr] 60 | | } [INFO] [stderr] | |_____^ [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#should_implement_trait [INFO] [stderr] [INFO] [stderr] warning: you seem to be trying to match on a boolean expression [INFO] [stderr] --> src/db/uniprot/csv.rs:83:20 [INFO] [stderr] | [INFO] [stderr] 83 | let reviewed = match record.reviewed { [INFO] [stderr] | ____________________^ [INFO] [stderr] 84 | | true => "reviewed", [INFO] [stderr] 85 | | false => "unreviewed", [INFO] [stderr] 86 | | }; [INFO] [stderr] | |_____^ help: consider using an if/else expression: `if record.reviewed { "reviewed" } else { "unreviewed" }` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#match_bool [INFO] [stderr] [INFO] [stderr] warning: writing `&Vec<_>` instead of `&[_]` involves one more reference and cannot be used with non-Vec-based slices. [INFO] [stderr] --> src/db/uniprot/csv.rs:272:29 [INFO] [stderr] | [INFO] [stderr] 272 | fn estimate_list_size(list: &RecordList) -> usize { [INFO] [stderr] | ^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#ptr_arg [INFO] [stderr] [INFO] [stderr] warning: you seem to be trying to use match for destructuring a single pattern. Consider using `if let` [INFO] [stderr] --> src/db/uniprot/csv.rs:423:13 [INFO] [stderr] | [INFO] [stderr] 423 | / match self.parse_header() { [INFO] [stderr] 424 | | Err(e) => return Some(Err(e)), [INFO] [stderr] 425 | | _ => (), [INFO] [stderr] 426 | | } [INFO] [stderr] | |_____________^ help: try this: `if let Err(e) = self.parse_header() { return Some(Err(e)) }` [INFO] [stderr] | [INFO] [stderr] = note: #[warn(clippy::single_match)] on by default [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#single_match [INFO] [stderr] [INFO] [stderr] warning: writing `&Vec<_>` instead of `&[_]` involves one more reference and cannot be used with non-Vec-based slices. [INFO] [stderr] --> src/db/uniprot/fasta.rs:67:29 [INFO] [stderr] | [INFO] [stderr] 67 | fn estimate_list_size(list: &RecordList) -> usize { [INFO] [stderr] | ^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#ptr_arg [INFO] [stderr] [INFO] [stderr] warning: length comparison to zero [INFO] [stderr] --> src/db/uniprot/fasta.rs:349:8 [INFO] [stderr] | [INFO] [stderr] 349 | if record.sequence.len() > 0 { [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^ help: using `is_empty` is clearer and more explicit: `!record.sequence.is_empty()` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#len_zero [INFO] [stderr] [INFO] [stderr] warning: writing `&Vec<_>` instead of `&[_]` involves one more reference and cannot be used with non-Vec-based slices. [INFO] [stderr] --> src/db/uniprot/xml.rs:40:29 [INFO] [stderr] | [INFO] [stderr] 40 | fn estimate_list_size(list: &RecordList) -> usize { [INFO] [stderr] | ^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#ptr_arg [INFO] [stderr] [INFO] [stderr] warning: you seem to be trying to use match for destructuring a single pattern. Consider using `if let` [INFO] [stderr] --> src/db/uniprot/xml.rs:59:10 [INFO] [stderr] | [INFO] [stderr] 59 | / match $e? { [INFO] [stderr] 60 | | Err(e) => return Some(Err(e)), [INFO] [stderr] 61 | | _ => (), [INFO] [stderr] 62 | | } [INFO] [stderr] | |_________^ help: try this: `if let Err(e) = $e? { try_opterr!(self.reader.seek_start(b"accession", 2)); }` [INFO] [stderr] ... [INFO] [stderr] 155 | try_opterr!(self.reader.seek_start(b"accession", 2)); [INFO] [stderr] | ----------------------------------------------------- in this macro invocation [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#single_match [INFO] [stderr] [INFO] [stderr] warning: you seem to be trying to use match for destructuring a single pattern. Consider using `if let` [INFO] [stderr] --> src/db/uniprot/xml.rs:59:10 [INFO] [stderr] | [INFO] [stderr] 59 | / match $e? { [INFO] [stderr] 60 | | Err(e) => return Some(Err(e)), [INFO] [stderr] 61 | | _ => (), [INFO] [stderr] 62 | | } [INFO] [stderr] | |_________^ help: try this: `if let Err(e) = $e? { try_opterr!(self.reader.seek_start(b"name", 2)); }` [INFO] [stderr] ... [INFO] [stderr] 168 | try_opterr!(self.reader.seek_start(b"name", 2)); [INFO] [stderr] | ------------------------------------------------ in this macro invocation [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#single_match [INFO] [stderr] [INFO] [stderr] warning: you seem to be trying to use match for destructuring a single pattern. Consider using `if let` [INFO] [stderr] --> src/db/uniprot/xml.rs:59:10 [INFO] [stderr] | [INFO] [stderr] 59 | / match $e? { [INFO] [stderr] 60 | | Err(e) => return Some(Err(e)), [INFO] [stderr] 61 | | _ => (), [INFO] [stderr] 62 | | } [INFO] [stderr] | |_________^ help: try this: `if let Err(e) = $e? { try_opterr!(self.reader.seek_start(b"recommendedName", 3)); }` [INFO] [stderr] ... [INFO] [stderr] 183 | try_opterr!(self.reader.seek_start(b"recommendedName", 3)); [INFO] [stderr] | ----------------------------------------------------------- in this macro invocation [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#single_match [INFO] [stderr] [INFO] [stderr] warning: you seem to be trying to use match for destructuring a single pattern. Consider using `if let` [INFO] [stderr] --> src/db/uniprot/xml.rs:59:10 [INFO] [stderr] | [INFO] [stderr] 59 | / match $e? { [INFO] [stderr] 60 | | Err(e) => return Some(Err(e)), [INFO] [stderr] 61 | | _ => (), [INFO] [stderr] 62 | | } [INFO] [stderr] | |_________^ help: try this: `if let Err(e) = $e? { try_opterr!(self.reader.seek_start(b"fullName", 4)); }` [INFO] [stderr] ... [INFO] [stderr] 186 | try_opterr!(self.reader.seek_start(b"fullName", 4)); [INFO] [stderr] | ---------------------------------------------------- in this macro invocation [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#single_match [INFO] [stderr] [INFO] [stderr] warning: you seem to be trying to use match for destructuring a single pattern. Consider using `if let` [INFO] [stderr] --> src/db/uniprot/xml.rs:59:10 [INFO] [stderr] | [INFO] [stderr] 59 | / match $e? { [INFO] [stderr] 60 | | Err(e) => return Some(Err(e)), [INFO] [stderr] 61 | | _ => (), [INFO] [stderr] 62 | | } [INFO] [stderr] | |_________^ help: try this: `if let Err(e) = $e? { try_opterr!(self.reader.seek_start(b"submittedName", 3)); }` [INFO] [stderr] ... [INFO] [stderr] 198 | try_opterr!(self.reader.seek_start(b"submittedName", 3)); [INFO] [stderr] | --------------------------------------------------------- in this macro invocation [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#single_match [INFO] [stderr] [INFO] [stderr] warning: you seem to be trying to use match for destructuring a single pattern. Consider using `if let` [INFO] [stderr] --> src/db/uniprot/xml.rs:59:10 [INFO] [stderr] | [INFO] [stderr] 59 | / match $e? { [INFO] [stderr] 60 | | Err(e) => return Some(Err(e)), [INFO] [stderr] 61 | | _ => (), [INFO] [stderr] 62 | | } [INFO] [stderr] | |_________^ help: try this: `if let Err(e) = $e? { try_opterr!(self.reader.seek_start(b"fullName", 4)); }` [INFO] [stderr] ... [INFO] [stderr] 201 | try_opterr!(self.reader.seek_start(b"fullName", 4)); [INFO] [stderr] | ---------------------------------------------------- in this macro invocation [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#single_match [INFO] [stderr] [INFO] [stderr] warning: you seem to be trying to match on a boolean expression [INFO] [stderr] --> src/db/uniprot/xml.rs:213:9 [INFO] [stderr] | [INFO] [stderr] 213 | / match record.reviewed { [INFO] [stderr] 214 | | true => self.read_swissport_protein(record), [INFO] [stderr] 215 | | false => self.read_trembl_protein(record), [INFO] [stderr] 216 | | } [INFO] [stderr] | |_________^ help: consider using an if/else expression: `if record.reviewed { self.read_swissport_protein(record) } else { self.read_trembl_protein(record) }` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#match_bool [INFO] [stderr] [INFO] [stderr] warning: you seem to be trying to use match for destructuring a single pattern. Consider using `if let` [INFO] [stderr] --> src/db/uniprot/xml.rs:59:10 [INFO] [stderr] | [INFO] [stderr] 59 | / match $e? { [INFO] [stderr] 60 | | Err(e) => return Some(Err(e)), [INFO] [stderr] 61 | | _ => (), [INFO] [stderr] 62 | | } [INFO] [stderr] | |_________^ help: try this: `if let Err(e) = $e? { try_opterr!(self.read_gene_name(record)); }` [INFO] [stderr] ... [INFO] [stderr] 259 | try_opterr!(self.read_gene_name(record)); [INFO] [stderr] | ----------------------------------------- in this macro invocation [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#single_match [INFO] [stderr] [INFO] [stderr] warning: you seem to be trying to use match for destructuring a single pattern. Consider using `if let` [INFO] [stderr] --> src/db/uniprot/xml.rs:59:10 [INFO] [stderr] | [INFO] [stderr] 59 | / match $e? { [INFO] [stderr] 60 | | Err(e) => return Some(Err(e)), [INFO] [stderr] 61 | | _ => (), [INFO] [stderr] 62 | | } [INFO] [stderr] | |_________^ help: try this: `if let Err(e) = $e? { try_opterr!(self.read_organism_value(record)); }` [INFO] [stderr] ... [INFO] [stderr] 340 | try_opterr!(self.read_organism_value(record)); [INFO] [stderr] | ---------------------------------------------- in this macro invocation [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#single_match [INFO] [stderr] [INFO] [stderr] warning: you seem to be trying to use match for destructuring a single pattern. Consider using `if let` [INFO] [stderr] --> src/db/uniprot/xml.rs:59:10 [INFO] [stderr] | [INFO] [stderr] 59 | / match $e? { [INFO] [stderr] 60 | | Err(e) => return Some(Err(e)), [INFO] [stderr] 61 | | _ => (), [INFO] [stderr] 62 | | } [INFO] [stderr] | |_________^ help: try this: `if let Err(e) = $e? { try_opterr!(self.read_taxonomy(record)); }` [INFO] [stderr] ... [INFO] [stderr] 341 | try_opterr!(self.read_taxonomy(record)); [INFO] [stderr] | ---------------------------------------- in this macro invocation [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#single_match [INFO] [stderr] [INFO] [stderr] warning: you seem to be trying to use match for destructuring a single pattern. Consider using `if let` [INFO] [stderr] --> src/db/uniprot/xml.rs:59:10 [INFO] [stderr] | [INFO] [stderr] 59 | / match $e? { [INFO] [stderr] 60 | | Err(e) => return Some(Err(e)), [INFO] [stderr] 61 | | _ => (), [INFO] [stderr] 62 | | } [INFO] [stderr] | |_________^ help: try this: `if let Err(e) = $e? { try_opterr!(self.read_gene_inside(record)); }` [INFO] [stderr] ... [INFO] [stderr] 361 | try_opterr!(self.read_gene_inside(record)); [INFO] [stderr] | ------------------------------------------- in this macro invocation [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#single_match [INFO] [stderr] [INFO] [stderr] warning: you seem to be trying to use match for destructuring a single pattern. Consider using `if let` [INFO] [stderr] --> src/db/uniprot/xml.rs:59:10 [INFO] [stderr] | [INFO] [stderr] 59 | / match $e? { [INFO] [stderr] 60 | | Err(e) => return Some(Err(e)), [INFO] [stderr] 61 | | _ => (), [INFO] [stderr] 62 | | } [INFO] [stderr] | |_________^ help: try this: `if let Err(e) = $e? { try_opterr!(self.reader.seek_start(b"organism", 2)); }` [INFO] [stderr] ... [INFO] [stderr] 362 | try_opterr!(self.reader.seek_start(b"organism", 2)); [INFO] [stderr] | ---------------------------------------------------- in this macro invocation [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#single_match [INFO] [stderr] [INFO] [stderr] warning: single-character string constant used as pattern [INFO] [stderr] --> src/db/uniprot/xml.rs:469:33 [INFO] [stderr] | [INFO] [stderr] 469 | v.split("\n").for_each(|s| sequence.append(&mut s.as_bytes().to_vec())); [INFO] [stderr] | ^^^^ help: try using a char instead: `'\n'` [INFO] [stderr] | [INFO] [stderr] = note: #[warn(clippy::single_char_pattern)] on by default [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#single_char_pattern [INFO] [stderr] [INFO] [stderr] warning: you seem to be trying to use match for destructuring a single pattern. Consider using `if let` [INFO] [stderr] --> src/db/uniprot/xml.rs:59:10 [INFO] [stderr] | [INFO] [stderr] 59 | / match $e? { [INFO] [stderr] 60 | | Err(e) => return Some(Err(e)), [INFO] [stderr] 61 | | _ => (), [INFO] [stderr] 62 | | } [INFO] [stderr] | |_________^ help: try this: `if let Err(e) = $e? { try_opterr!(self.read_accession(record)); }` [INFO] [stderr] ... [INFO] [stderr] 480 | try_opterr!(self.read_accession(record)); [INFO] [stderr] | ----------------------------------------- in this macro invocation [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#single_match [INFO] [stderr] [INFO] [stderr] warning: you seem to be trying to use match for destructuring a single pattern. Consider using `if let` [INFO] [stderr] --> src/db/uniprot/xml.rs:59:10 [INFO] [stderr] | [INFO] [stderr] 59 | / match $e? { [INFO] [stderr] 60 | | Err(e) => return Some(Err(e)), [INFO] [stderr] 61 | | _ => (), [INFO] [stderr] 62 | | } [INFO] [stderr] | |_________^ help: try this: `if let Err(e) = $e? { try_opterr!(self.read_mnemonic(record)); }` [INFO] [stderr] ... [INFO] [stderr] 481 | try_opterr!(self.read_mnemonic(record)); [INFO] [stderr] | ---------------------------------------- in this macro invocation [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#single_match [INFO] [stderr] [INFO] [stderr] warning: you seem to be trying to use match for destructuring a single pattern. Consider using `if let` [INFO] [stderr] --> src/db/uniprot/xml.rs:59:10 [INFO] [stderr] | [INFO] [stderr] 59 | / match $e? { [INFO] [stderr] 60 | | Err(e) => return Some(Err(e)), [INFO] [stderr] 61 | | _ => (), [INFO] [stderr] 62 | | } [INFO] [stderr] | |_________^ help: try this: `if let Err(e) = $e? { try_opterr!(self.read_protein(record)); }` [INFO] [stderr] ... [INFO] [stderr] 482 | try_opterr!(self.read_protein(record)); [INFO] [stderr] | --------------------------------------- in this macro invocation [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#single_match [INFO] [stderr] [INFO] [stderr] warning: you seem to be trying to use match for destructuring a single pattern. Consider using `if let` [INFO] [stderr] --> src/db/uniprot/xml.rs:59:10 [INFO] [stderr] | [INFO] [stderr] 59 | / match $e? { [INFO] [stderr] 60 | | Err(e) => return Some(Err(e)), [INFO] [stderr] 61 | | _ => (), [INFO] [stderr] 62 | | } [INFO] [stderr] | |_________^ help: try this: `if let Err(e) = $e? { try_opterr!(self.read_gene_or_organism(record)); }` [INFO] [stderr] ... [INFO] [stderr] 483 | try_opterr!(self.read_gene_or_organism(record)); [INFO] [stderr] | ------------------------------------------------ in this macro invocation [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#single_match [INFO] [stderr] [INFO] [stderr] warning: you seem to be trying to use match for destructuring a single pattern. Consider using `if let` [INFO] [stderr] --> src/db/uniprot/xml.rs:59:10 [INFO] [stderr] | [INFO] [stderr] 59 | / match $e? { [INFO] [stderr] 60 | | Err(e) => return Some(Err(e)), [INFO] [stderr] 61 | | _ => (), [INFO] [stderr] 62 | | } [INFO] [stderr] | |_________^ help: try this: `if let Err(e) = $e? { try_opterr!(self.read_proteome(record)); }` [INFO] [stderr] ... [INFO] [stderr] 485 | try_opterr!(self.read_proteome(record)); [INFO] [stderr] | ---------------------------------------- in this macro invocation [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#single_match [INFO] [stderr] [INFO] [stderr] warning: you seem to be trying to use match for destructuring a single pattern. Consider using `if let` [INFO] [stderr] --> src/db/uniprot/xml.rs:59:10 [INFO] [stderr] | [INFO] [stderr] 59 | / match $e? { [INFO] [stderr] 60 | | Err(e) => return Some(Err(e)), [INFO] [stderr] 61 | | _ => (), [INFO] [stderr] 62 | | } [INFO] [stderr] | |_________^ help: try this: `if let Err(e) = $e? { try_opterr!(self.read_evidence(record)); }` [INFO] [stderr] ... [INFO] [stderr] 487 | try_opterr!(self.read_evidence(record)); [INFO] [stderr] | ---------------------------------------- in this macro invocation [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#single_match [INFO] [stderr] [INFO] [stderr] warning: you seem to be trying to use match for destructuring a single pattern. Consider using `if let` [INFO] [stderr] --> src/db/uniprot/xml.rs:59:10 [INFO] [stderr] | [INFO] [stderr] 59 | / match $e? { [INFO] [stderr] 60 | | Err(e) => return Some(Err(e)), [INFO] [stderr] 61 | | _ => (), [INFO] [stderr] 62 | | } [INFO] [stderr] | |_________^ help: try this: `if let Err(e) = $e? { try_opterr!(self.read_sequence(record)); }` [INFO] [stderr] ... [INFO] [stderr] 488 | try_opterr!(self.read_sequence(record)); [INFO] [stderr] | ---------------------------------------- in this macro invocation [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#single_match [INFO] [stderr] [INFO] [stderr] warning: you seem to be trying to use match for destructuring a single pattern. Consider using `if let` [INFO] [stderr] --> src/db/uniprot/xml.rs:59:10 [INFO] [stderr] | [INFO] [stderr] 59 | / match $e? { [INFO] [stderr] 60 | | Err(e) => return Some(Err(e)), [INFO] [stderr] 61 | | _ => (), [INFO] [stderr] 62 | | } [INFO] [stderr] | |_________^ help: try this: `if let Err(e) = $e? { try_opterr!(self.parse_record(&mut record)); }` [INFO] [stderr] ... [INFO] [stderr] 505 | try_opterr!(self.parse_record(&mut record)); [INFO] [stderr] | -------------------------------------------- in this macro invocation [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#single_match [INFO] [stderr] [INFO] [stderr] warning: you seem to be trying to use match for destructuring a single pattern. Consider using `if let` [INFO] [stderr] --> src/db/uniprot/xml.rs:510:24 [INFO] [stderr] | [INFO] [stderr] 510 | Some(v) => match v { [INFO] [stderr] | ________________________^ [INFO] [stderr] 511 | | Err(e) => return Some(Err(e)), [INFO] [stderr] 512 | | _ => (), [INFO] [stderr] 513 | | }, [INFO] [stderr] | |_____________^ help: try this: `if let Err(e) = v { return Some(Err(e)) }` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#single_match [INFO] [stderr] [INFO] [stderr] warning: you seem to be trying to match on a boolean expression [INFO] [stderr] --> src/db/uniprot/xml.rs:593:9 [INFO] [stderr] | [INFO] [stderr] 593 | / match record.reviewed { [INFO] [stderr] 594 | | true => self.writer.write_start_element(b"entry", &[ [INFO] [stderr] 595 | | (b"dataset", b"Swiss-Prot"), [INFO] [stderr] 596 | | ]), [INFO] [stderr] ... | [INFO] [stderr] 599 | | ]), [INFO] [stderr] 600 | | } [INFO] [stderr] | |_________^ [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#match_bool [INFO] [stderr] help: consider using an if/else expression [INFO] [stderr] | [INFO] [stderr] 593 | if record.reviewed { self.writer.write_start_element(b"entry", &[ [INFO] [stderr] 594 | (b"dataset", b"Swiss-Prot"), [INFO] [stderr] 595 | ]) } else { self.writer.write_start_element(b"entry", &[ [INFO] [stderr] 596 | (b"dataset", b"TrEMBL"), [INFO] [stderr] 597 | ]) } [INFO] [stderr] | [INFO] [stderr] [INFO] [stderr] warning: you seem to be trying to match on a boolean expression [INFO] [stderr] --> src/db/uniprot/xml.rs:625:9 [INFO] [stderr] | [INFO] [stderr] 625 | / match record.reviewed { [INFO] [stderr] 626 | | true => self.write_recommended_name(record)?, [INFO] [stderr] 627 | | false => self.write_submitted_name(record)?, [INFO] [stderr] 628 | | }; [INFO] [stderr] | |_________^ help: consider using an if/else expression: `if record.reviewed { self.write_recommended_name(record)? } else { self.write_submitted_name(record)? }` [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#match_bool [INFO] [stderr] [INFO] [stderr] warning: writing `&Vec<_>` instead of `&[_]` involves one more reference and cannot be used with non-Vec-based slices. [INFO] [stderr] --> src/db/uniprot/test.rs:72:30 [INFO] [stderr] | [INFO] [stderr] 72 | pub fn incomplete_list_eq(x: &RecordList, y: &RecordList) { [INFO] [stderr] | ^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#ptr_arg [INFO] [stderr] [INFO] [stderr] warning: writing `&Vec<_>` instead of `&[_]` involves one more reference and cannot be used with non-Vec-based slices. [INFO] [stderr] --> src/db/uniprot/test.rs:72:46 [INFO] [stderr] | [INFO] [stderr] 72 | pub fn incomplete_list_eq(x: &RecordList, y: &RecordList) { [INFO] [stderr] | ^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#ptr_arg [INFO] [stderr] [INFO] [stderr] warning: writing `&Vec<_>` instead of `&[_]` involves one more reference and cannot be used with non-Vec-based slices. [INFO] [stderr] --> src/io/uniprot.rs:35:28 [INFO] [stderr] | [INFO] [stderr] 35 | pub fn to_string(list: &RecordList) -> ResultType { [INFO] [stderr] | ^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#ptr_arg [INFO] [stderr] [INFO] [stderr] warning: methods called `to_*` usually take self by reference; consider choosing a less ambiguous name [INFO] [stderr] --> src/io/uniprot.rs:35:22 [INFO] [stderr] | [INFO] [stderr] 35 | pub fn to_string(list: &RecordList) -> ResultType { [INFO] [stderr] | ^^^^ [INFO] [stderr] | [INFO] [stderr] = note: #[warn(clippy::wrong_self_convention)] on by default [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#wrong_self_convention [INFO] [stderr] [INFO] [stderr] warning: writing `&Vec<_>` instead of `&[_]` involves one more reference and cannot be used with non-Vec-based slices. [INFO] [stderr] --> src/io/uniprot.rs:41:42 [INFO] [stderr] | [INFO] [stderr] 41 | pub fn to_file>(list: &RecordList, path: P) -> ResultType<()> { [INFO] [stderr] | ^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#ptr_arg [INFO] [stderr] [INFO] [stderr] warning: methods called `to_*` usually take self by reference; consider choosing a less ambiguous name [INFO] [stderr] --> src/io/uniprot.rs:41:36 [INFO] [stderr] | [INFO] [stderr] 41 | pub fn to_file>(list: &RecordList, path: P) -> ResultType<()> { [INFO] [stderr] | ^^^^ [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#wrong_self_convention [INFO] [stderr] [INFO] [stderr] warning: writing `&Vec<_>` instead of `&[_]` involves one more reference and cannot be used with non-Vec-based slices. [INFO] [stderr] --> src/io/uniprot.rs:66:28 [INFO] [stderr] | [INFO] [stderr] 66 | pub fn to_string(list: &RecordList) -> ResultType { [INFO] [stderr] | ^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#ptr_arg [INFO] [stderr] [INFO] [stderr] warning: methods called `to_*` usually take self by reference; consider choosing a less ambiguous name [INFO] [stderr] --> src/io/uniprot.rs:66:22 [INFO] [stderr] | [INFO] [stderr] 66 | pub fn to_string(list: &RecordList) -> ResultType { [INFO] [stderr] | ^^^^ [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#wrong_self_convention [INFO] [stderr] [INFO] [stderr] warning: writing `&Vec<_>` instead of `&[_]` involves one more reference and cannot be used with non-Vec-based slices. [INFO] [stderr] --> src/io/uniprot.rs:72:42 [INFO] [stderr] | [INFO] [stderr] 72 | pub fn to_file>(list: &RecordList, path: P) -> ResultType<()> { [INFO] [stderr] | ^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#ptr_arg [INFO] [stderr] [INFO] [stderr] warning: methods called `to_*` usually take self by reference; consider choosing a less ambiguous name [INFO] [stderr] --> src/io/uniprot.rs:72:36 [INFO] [stderr] | [INFO] [stderr] 72 | pub fn to_file>(list: &RecordList, path: P) -> ResultType<()> { [INFO] [stderr] | ^^^^ [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#wrong_self_convention [INFO] [stderr] [INFO] [stderr] warning: writing `&Vec<_>` instead of `&[_]` involves one more reference and cannot be used with non-Vec-based slices. [INFO] [stderr] --> src/io/uniprot.rs:97:28 [INFO] [stderr] | [INFO] [stderr] 97 | pub fn to_string(list: &RecordList) -> ResultType { [INFO] [stderr] | ^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#ptr_arg [INFO] [stderr] [INFO] [stderr] warning: methods called `to_*` usually take self by reference; consider choosing a less ambiguous name [INFO] [stderr] --> src/io/uniprot.rs:97:22 [INFO] [stderr] | [INFO] [stderr] 97 | pub fn to_string(list: &RecordList) -> ResultType { [INFO] [stderr] | ^^^^ [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#wrong_self_convention [INFO] [stderr] [INFO] [stderr] warning: writing `&Vec<_>` instead of `&[_]` involves one more reference and cannot be used with non-Vec-based slices. [INFO] [stderr] --> src/io/uniprot.rs:103:42 [INFO] [stderr] | [INFO] [stderr] 103 | pub fn to_file>(list: &RecordList, path: P) -> ResultType<()> { [INFO] [stderr] | ^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#ptr_arg [INFO] [stderr] [INFO] [stderr] warning: methods called `to_*` usually take self by reference; consider choosing a less ambiguous name [INFO] [stderr] --> src/io/uniprot.rs:103:36 [INFO] [stderr] | [INFO] [stderr] 103 | pub fn to_file>(list: &RecordList, path: P) -> ResultType<()> { [INFO] [stderr] | ^^^^ [INFO] [stderr] | [INFO] [stderr] = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#wrong_self_convention [INFO] [stderr] [INFO] [stderr] error: aborting due to 3 previous errors [INFO] [stderr] [INFO] [stderr] error: Could not compile `bdb`. [INFO] [stderr] [INFO] [stderr] To learn more, run the command again with --verbose. [INFO] running `"docker" "inspect" "d1162e66e3b2cb2966a80adc69e67ab74526165ec6d9acb278a6f16daba02578"` [INFO] running `"docker" "rm" "-f" "d1162e66e3b2cb2966a80adc69e67ab74526165ec6d9acb278a6f16daba02578"` [INFO] [stdout] d1162e66e3b2cb2966a80adc69e67ab74526165ec6d9acb278a6f16daba02578