[INFO] cloning repository https://github.com/zhilizheng/hdf5Convert
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/zhilizheng/hdf5Convert" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fzhilizheng%2Fhdf5Convert", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fzhilizheng%2Fhdf5Convert'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 5306b777b3bafadaa94bf74418f78d166a275485
[INFO] checking zhilizheng/hdf5Convert against nightly-2024-02-05 for check-cfg
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fzhilizheng%2Fhdf5Convert" "/workspace/builds/worker-0-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-0-tc1/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/zhilizheng/hdf5Convert on toolchain nightly-2024-02-05
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+nightly-2024-02-05" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/zhilizheng/hdf5Convert
[INFO] finished tweaking git repo https://github.com/zhilizheng/hdf5Convert
[INFO] tweaked toml for git repo https://github.com/zhilizheng/hdf5Convert written to /workspace/builds/worker-0-tc1/source/Cargo.toml
[INFO] crate git repo https://github.com/zhilizheng/hdf5Convert already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+nightly-2024-02-05" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded hdf5-types v0.8.1
[INFO] [stderr]   Downloaded proc-macro2 v1.0.39
[INFO] [stderr]   Downloaded hdf5-derive v0.8.1
[INFO] [stderr]   Downloaded num-complex v0.4.1
[INFO] [stderr]   Downloaded hdf5-sys v0.8.1
[INFO] [stderr]   Downloaded unicode-ident v1.0.0
[INFO] [stderr]   Downloaded matrixmultiply v0.3.2
[INFO] [stderr]   Downloaded regex v1.5.6
[INFO] [stderr]   Downloaded hdf5 v0.8.1
[INFO] [stderr]   Downloaded syn v1.0.96
[INFO] [stderr]   Downloaded regex-syntax v0.6.26
[INFO] [stderr]   Downloaded ndarray v0.15.4
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+nightly-2024-02-05" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 3d89082bc6c1ecfecc2783d04f64687b017f5f67ce6886659a3dc4436f3be5c5
[INFO] running `Command { std: "docker" "start" "-a" "3d89082bc6c1ecfecc2783d04f64687b017f5f67ce6886659a3dc4436f3be5c5", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "3d89082bc6c1ecfecc2783d04f64687b017f5f67ce6886659a3dc4436f3be5c5", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "3d89082bc6c1ecfecc2783d04f64687b017f5f67ce6886659a3dc4436f3be5c5", kill_on_drop: false }`
[INFO] [stdout] 3d89082bc6c1ecfecc2783d04f64687b017f5f67ce6886659a3dc4436f3be5c5
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+nightly-2024-02-05" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] c9eb02b0f062fc2c9e5850f39a99b1d0f2c59c77228341fd79cea04fa80b463c
[INFO] running `Command { std: "docker" "start" "-a" "c9eb02b0f062fc2c9e5850f39a99b1d0f2c59c77228341fd79cea04fa80b463c", kill_on_drop: false }`
[INFO] [stderr]    Compiling memchr v2.5.0
[INFO] [stderr]    Compiling regex-syntax v0.6.26
[INFO] [stderr]    Compiling libloading v0.7.3
[INFO] [stderr]    Compiling libc v0.2.126
[INFO] [stderr]    Compiling pkg-config v0.3.25
[INFO] [stderr]    Compiling num-traits v0.2.15
[INFO] [stderr]    Compiling proc-macro2 v1.0.39
[INFO] [stderr]    Compiling unicode-ident v1.0.0
[INFO] [stderr]    Compiling num-integer v0.1.45
[INFO] [stderr]    Compiling lock_api v0.4.7
[INFO] [stderr]    Compiling parking_lot_core v0.8.5
[INFO] [stderr]    Compiling syn v1.0.96
[INFO] [stderr]     Checking rawpointer v0.2.1
[INFO] [stderr]     Checking smallvec v1.8.0
[INFO] [stderr]     Checking instant v0.1.12
[INFO] [stderr]    Compiling hdf5-types v0.8.1
[INFO] [stderr]     Checking matrixmultiply v0.3.2
[INFO] [stderr]     Checking ascii v1.0.0
[INFO] [stderr]    Compiling hdf5 v0.8.1
[INFO] [stderr]     Checking miniz_oxide v0.5.3
[INFO] [stderr]    Compiling paste v1.0.7
[INFO] [stderr]    Compiling aho-corasick v0.7.18
[INFO] [stderr]     Checking flate2 v1.0.24
[INFO] [stderr]    Compiling quote v1.0.18
[INFO] [stderr]     Checking parking_lot v0.11.2
[INFO] [stderr]     Checking num-complex v0.4.1
[INFO] [stderr]     Checking ndarray v0.15.4
[INFO] [stderr]    Compiling regex v1.5.6
[INFO] [stderr]    Compiling hdf5-sys v0.8.1
[INFO] [stderr]    Compiling hdf5-derive v0.8.1
[INFO] [stderr]     Checking hdf5Convert v0.1.1 (/opt/rustwide/workdir)
[INFO] [stdout] warning: unused import: `H5Type`
[INFO] [stdout]  --> src/main.rs:9:18
[INFO] [stdout]   |
[INFO] [stdout] 9 | use hdf5::{File, H5Type, Result};
[INFO] [stdout]   |                  ^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused imports: `Array2`, `arr2`
[INFO] [stdout]   --> src/main.rs:10:15
[INFO] [stdout]    |
[INFO] [stdout] 10 | use ndarray::{arr2, Array2, Array1, s};
[INFO] [stdout]    |               ^^^^  ^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `flate2::read`
[INFO] [stdout]   --> src/main.rs:16:5
[INFO] [stdout]    |
[INFO] [stdout] 16 | use flate2::read;
[INFO] [stdout]    |     ^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `H5Type`
[INFO] [stdout]  --> src/main.rs:9:18
[INFO] [stdout]   |
[INFO] [stdout] 9 | use hdf5::{File, H5Type, Result};
[INFO] [stdout]   |                  ^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused imports: `BufRead`, `BufReader`, `self`
[INFO] [stdout]   --> src/main.rs:21:15
[INFO] [stdout]    |
[INFO] [stdout] 21 | use std::io::{self, BufRead, BufReader, BufWriter, Write};
[INFO] [stdout]    |               ^^^^  ^^^^^^^  ^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused imports: `Array2`, `arr2`
[INFO] [stdout]   --> src/main.rs:10:15
[INFO] [stdout]    |
[INFO] [stdout] 10 | use ndarray::{arr2, Array2, Array1, s};
[INFO] [stdout]    |               ^^^^  ^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `flate2::read`
[INFO] [stdout]   --> src/main.rs:16:5
[INFO] [stdout]    |
[INFO] [stdout] 16 | use flate2::read;
[INFO] [stdout]    |     ^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused imports: `BufRead`, `BufReader`, `self`
[INFO] [stdout]   --> src/main.rs:21:15
[INFO] [stdout]    |
[INFO] [stdout] 21 | use std::io::{self, BufRead, BufReader, BufWriter, Write};
[INFO] [stdout]    |               ^^^^  ^^^^^^^  ^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated method `std::error::Error::description`: use the Display impl or to_string()
[INFO] [stdout]   --> src/main.rs:30:72
[INFO] [stdout]    |
[INFO] [stdout] 30 |         Err(why) => panic!("couldn't open {}: {}", path.display(), why.description().to_string()),
[INFO] [stdout]    |                                                                        ^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(deprecated)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated method `std::error::Error::description`: use the Display impl or to_string()
[INFO] [stdout]   --> src/main.rs:30:72
[INFO] [stdout]    |
[INFO] [stdout] 30 |         Err(why) => panic!("couldn't open {}: {}", path.display(), why.description().to_string()),
[INFO] [stdout]    |                                                                        ^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(deprecated)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: crate `h5ToVCF` should have a snake case name
[INFO] [stdout]   |
[INFO] [stdout]   = help: convert the identifier to snake case: `h5_to_vcf`
[INFO] [stdout]   = note: `#[warn(non_snake_case)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: crate `h5ToVCF` should have a snake case name
[INFO] [stdout]   |
[INFO] [stdout]   = help: convert the identifier to snake case: `h5_to_vcf`
[INFO] [stdout]   = note: `#[warn(non_snake_case)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 6 warnings emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 6 warnings emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 4.45s
[INFO] running `Command { std: "docker" "inspect" "c9eb02b0f062fc2c9e5850f39a99b1d0f2c59c77228341fd79cea04fa80b463c", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "c9eb02b0f062fc2c9e5850f39a99b1d0f2c59c77228341fd79cea04fa80b463c", kill_on_drop: false }`
[INFO] [stdout] c9eb02b0f062fc2c9e5850f39a99b1d0f2c59c77228341fd79cea04fa80b463c
