[INFO] fetching crate rust-bio-tools 0.42.0...
[INFO] checking rust-bio-tools-0.42.0 against nightly-2024-02-05 for check-cfg
[INFO] extracting crate rust-bio-tools 0.42.0 into /workspace/builds/worker-1-tc1/source
[INFO] validating manifest of crates.io crate rust-bio-tools 0.42.0 on toolchain nightly-2024-02-05
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+nightly-2024-02-05" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] removed /workspace/builds/worker-1-tc1/source/.cargo/config
[INFO] started tweaking crates.io crate rust-bio-tools 0.42.0
[INFO] finished tweaking crates.io crate rust-bio-tools 0.42.0
[INFO] tweaked toml for crates.io crate rust-bio-tools 0.42.0 written to /workspace/builds/worker-1-tc1/source/Cargo.toml
[INFO] crate crates.io crate rust-bio-tools 0.42.0 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+nightly-2024-02-05" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded tera v1.17.1
[INFO] [stderr]   Downloaded chrono-tz-build v0.0.3
[INFO] [stderr]   Downloaded indicatif v0.11.0
[INFO] [stderr]   Downloaded xlsxwriter v0.3.5
[INFO] [stderr]   Downloaded cxxbridge-flags v1.0.86
[INFO] [stderr]   Downloaded c_vec v1.0.12
[INFO] [stderr]   Downloaded number_prefix v0.2.8
[INFO] [stderr]   Downloaded pest_derive v2.5.3
[INFO] [stderr]   Downloaded pest_generator v2.5.3
[INFO] [stderr]   Downloaded bio-types v0.13.0
[INFO] [stderr]   Downloaded cxxbridge-macro v1.0.86
[INFO] [stderr]   Downloaded cxx-build v1.0.86
[INFO] [stderr]   Downloaded pest v2.5.3
[INFO] [stderr]   Downloaded rust-htslib v0.38.2
[INFO] [stderr]   Downloaded bio v0.39.2
[INFO] [stderr]   Downloaded chrono-tz v0.6.3
[INFO] [stderr]   Downloaded libxlsxwriter-sys v1.1.4
[INFO] [stderr]   Downloaded cxx v1.0.86
[INFO] [stderr]   Downloaded hts-sys v2.0.3
[INFO] [stderr]   Downloaded jsonm v0.1.4
[INFO] [stderr]   Downloaded lz-str v0.1.0
[INFO] [stderr]   Downloaded bstr v1.1.0
[INFO] [stderr]   Downloaded GSL v1.1.0
[INFO] [stderr]   Downloaded net2 v0.2.38
[INFO] [stderr]   Downloaded pest_meta v2.5.3
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+nightly-2024-02-05" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 29b8082362feccad615745967640e8d4c15f0b084e987f54f3c6e40a1078a9b1
[INFO] running `Command { std: "docker" "start" "-a" "29b8082362feccad615745967640e8d4c15f0b084e987f54f3c6e40a1078a9b1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "29b8082362feccad615745967640e8d4c15f0b084e987f54f3c6e40a1078a9b1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "29b8082362feccad615745967640e8d4c15f0b084e987f54f3c6e40a1078a9b1", kill_on_drop: false }`
[INFO] [stdout] 29b8082362feccad615745967640e8d4c15f0b084e987f54f3c6e40a1078a9b1
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+nightly-2024-02-05" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 49fa4fbff4d2f55eca49dca4cb785d9f12177d3efcf7c26ab124126e941d3340
[INFO] running `Command { std: "docker" "start" "-a" "49fa4fbff4d2f55eca49dca4cb785d9f12177d3efcf7c26ab124126e941d3340", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.50
[INFO] [stderr]    Compiling syn v1.0.107
[INFO] [stderr]    Compiling jobserver v0.1.25
[INFO] [stderr]    Compiling libm v0.2.6
[INFO] [stderr]    Compiling num-traits v0.2.15
[INFO] [stderr]    Compiling memchr v2.5.0
[INFO] [stderr]    Compiling glob v0.3.1
[INFO] [stderr]     Checking log v0.4.17
[INFO] [stderr]    Compiling regex-syntax v0.6.28
[INFO] [stderr]    Compiling cc v1.0.78
[INFO] [stderr]     Checking either v1.8.0
[INFO] [stderr]     Checking futures v0.1.31
[INFO] [stdout] error[E0422]: cannot find struct, variant or union type `LineColumn` in crate `proc_macro`
[INFO] [stdout]    --> /opt/rustwide/cargo-home/registry/src/index.crates.io-6f17d22bba15001f/proc-macro2-1.0.50/src/wrapper.rs:475:33
[INFO] [stdout]     |
[INFO] [stdout] 475 |                 let proc_macro::LineColumn { line, column } = s.start();
[INFO] [stdout]     |                                 ^^^^^^^^^^ not found in `proc_macro`
[INFO] [stdout]     |
[INFO] [stdout] help: consider importing this struct through its public re-export
[INFO] [stdout]     |
[INFO] [stdout] 1   + use crate::LineColumn;
[INFO] [stdout]     |
[INFO] [stdout] help: if you import `LineColumn`, refer to it directly
[INFO] [stdout]     |
[INFO] [stdout] 475 -                 let proc_macro::LineColumn { line, column } = s.start();
[INFO] [stdout] 475 +                 let LineColumn { line, column } = s.start();
[INFO] [stdout]     |
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error[E0422]: cannot find struct, variant or union type `LineColumn` in crate `proc_macro`
[INFO] [stdout]    --> /opt/rustwide/cargo-home/registry/src/index.crates.io-6f17d22bba15001f/proc-macro2-1.0.50/src/wrapper.rs:489:33
[INFO] [stdout]     |
[INFO] [stdout] 489 |                 let proc_macro::LineColumn { line, column } = s.end();
[INFO] [stdout]     |                                 ^^^^^^^^^^ not found in `proc_macro`
[INFO] [stdout]     |
[INFO] [stdout] help: consider importing this struct through its public re-export
[INFO] [stdout]     |
[INFO] [stdout] 1   + use crate::LineColumn;
[INFO] [stdout]     |
[INFO] [stdout] help: if you import `LineColumn`, refer to it directly
[INFO] [stdout]     |
[INFO] [stdout] 489 -                 let proc_macro::LineColumn { line, column } = s.end();
[INFO] [stdout] 489 +                 let LineColumn { line, column } = s.end();
[INFO] [stdout]     |
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]    Compiling aho-corasick v0.7.20
[INFO] [stdout] error[E0635]: unknown feature `proc_macro_span_shrink`
[INFO] [stdout]   --> /opt/rustwide/cargo-home/registry/src/index.crates.io-6f17d22bba15001f/proc-macro2-1.0.50/src/lib.rs:92:30
[INFO] [stdout]    |
[INFO] [stdout] 92 |     feature(proc_macro_span, proc_macro_span_shrink)
[INFO] [stdout]    |                              ^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: aborting due to 3 previous errors
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] Some errors have detailed explanations: E0422, E0635.
[INFO] [stdout] 
[INFO] [stdout] For more information about an error, try `rustc --explain E0422`.
[INFO] [stdout] 
[INFO] [stderr] error: could not compile `proc-macro2` (lib) due to 4 previous errors
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] running `Command { std: "docker" "inspect" "49fa4fbff4d2f55eca49dca4cb785d9f12177d3efcf7c26ab124126e941d3340", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "49fa4fbff4d2f55eca49dca4cb785d9f12177d3efcf7c26ab124126e941d3340", kill_on_drop: false }`
[INFO] [stdout] 49fa4fbff4d2f55eca49dca4cb785d9f12177d3efcf7c26ab124126e941d3340
[INFO] checking rust-bio-tools-0.42.0 against nightly-2024-02-05+rustflags=-Dunexpected_cfgs+cargoflags=-Zcheck-cfg for check-cfg
[INFO] extracting crate rust-bio-tools 0.42.0 into /workspace/builds/worker-1-tc2/source
[INFO] validating manifest of crates.io crate rust-bio-tools 0.42.0 on toolchain nightly-2024-02-05
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+nightly-2024-02-05" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] removed /workspace/builds/worker-1-tc2/source/.cargo/config
[INFO] started tweaking crates.io crate rust-bio-tools 0.42.0
[INFO] finished tweaking crates.io crate rust-bio-tools 0.42.0
[INFO] tweaked toml for crates.io crate rust-bio-tools 0.42.0 written to /workspace/builds/worker-1-tc2/source/Cargo.toml
[INFO] crate crates.io crate rust-bio-tools 0.42.0 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+nightly-2024-02-05" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+nightly-2024-02-05" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] f3b0072b372572e1a40ad895aff063011fd94fe33540b36c900f97075aba7ef5
[INFO] running `Command { std: "docker" "start" "-a" "f3b0072b372572e1a40ad895aff063011fd94fe33540b36c900f97075aba7ef5", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "f3b0072b372572e1a40ad895aff063011fd94fe33540b36c900f97075aba7ef5", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "f3b0072b372572e1a40ad895aff063011fd94fe33540b36c900f97075aba7ef5", kill_on_drop: false }`
[INFO] [stdout] f3b0072b372572e1a40ad895aff063011fd94fe33540b36c900f97075aba7ef5
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid -Dunexpected_cfgs" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+nightly-2024-02-05" "check" "--frozen" "--all" "--all-targets" "--message-format=json" "-Zcheck-cfg", kill_on_drop: false }`
[INFO] [stdout] 58ffd7f68b24cf37e6869bb0b145a4af0c5f64229f4460dd40ae07d3cb82f957
[INFO] running `Command { std: "docker" "start" "-a" "58ffd7f68b24cf37e6869bb0b145a4af0c5f64229f4460dd40ae07d3cb82f957", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.50
[INFO] [stderr]    Compiling syn v1.0.107
[INFO] [stderr]    Compiling jobserver v0.1.25
[INFO] [stderr]    Compiling libm v0.2.6
[INFO] [stderr]    Compiling log v0.4.17
[INFO] [stderr]    Compiling num-traits v0.2.15
[INFO] [stderr]    Compiling memchr v2.5.0
[INFO] [stderr]    Compiling glob v0.3.1
[INFO] [stderr]    Compiling regex-syntax v0.6.28
[INFO] [stderr]    Compiling cc v1.0.78
[INFO] [stderr]     Checking either v1.8.0
[INFO] [stderr]     Checking futures v0.1.31
[INFO] [stdout] error[E0422]: cannot find struct, variant or union type `LineColumn` in crate `proc_macro`
[INFO] [stdout]    --> /opt/rustwide/cargo-home/registry/src/index.crates.io-6f17d22bba15001f/proc-macro2-1.0.50/src/wrapper.rs:475:33
[INFO] [stdout]     |
[INFO] [stdout] 475 |                 let proc_macro::LineColumn { line, column } = s.start();
[INFO] [stdout]     |                                 ^^^^^^^^^^ not found in `proc_macro`
[INFO] [stdout]     |
[INFO] [stdout] help: consider importing this struct through its public re-export
[INFO] [stdout]     |
[INFO] [stdout] 1   + use crate::LineColumn;
[INFO] [stdout]     |
[INFO] [stdout] help: if you import `LineColumn`, refer to it directly
[INFO] [stdout]     |
[INFO] [stdout] 475 -                 let proc_macro::LineColumn { line, column } = s.start();
[INFO] [stdout] 475 +                 let LineColumn { line, column } = s.start();
[INFO] [stdout]     |
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error[E0422]: cannot find struct, variant or union type `LineColumn` in crate `proc_macro`
[INFO] [stdout]    --> /opt/rustwide/cargo-home/registry/src/index.crates.io-6f17d22bba15001f/proc-macro2-1.0.50/src/wrapper.rs:489:33
[INFO] [stdout]     |
[INFO] [stdout] 489 |                 let proc_macro::LineColumn { line, column } = s.end();
[INFO] [stdout]     |                                 ^^^^^^^^^^ not found in `proc_macro`
[INFO] [stdout]     |
[INFO] [stdout] help: consider importing this struct through its public re-export
[INFO] [stdout]     |
[INFO] [stdout] 1   + use crate::LineColumn;
[INFO] [stdout]     |
[INFO] [stdout] help: if you import `LineColumn`, refer to it directly
[INFO] [stdout]     |
[INFO] [stdout] 489 -                 let proc_macro::LineColumn { line, column } = s.end();
[INFO] [stdout] 489 +                 let LineColumn { line, column } = s.end();
[INFO] [stdout]     |
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]    Compiling aho-corasick v0.7.20
[INFO] [stdout] error[E0635]: unknown feature `proc_macro_span_shrink`
[INFO] [stdout]   --> /opt/rustwide/cargo-home/registry/src/index.crates.io-6f17d22bba15001f/proc-macro2-1.0.50/src/lib.rs:92:30
[INFO] [stdout]    |
[INFO] [stdout] 92 |     feature(proc_macro_span, proc_macro_span_shrink)
[INFO] [stdout]    |                              ^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]    Compiling crossbeam-utils v0.7.2
[INFO] [stdout] error: aborting due to 3 previous errors
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] Some errors have detailed explanations: E0422, E0635.
[INFO] [stdout] 
[INFO] [stdout] For more information about an error, try `rustc --explain E0422`.
[INFO] [stdout] 
[INFO] [stderr] error: could not compile `proc-macro2` (lib) due to 4 previous errors
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] running `Command { std: "docker" "inspect" "58ffd7f68b24cf37e6869bb0b145a4af0c5f64229f4460dd40ae07d3cb82f957", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "58ffd7f68b24cf37e6869bb0b145a4af0c5f64229f4460dd40ae07d3cb82f957", kill_on_drop: false }`
[INFO] [stdout] 58ffd7f68b24cf37e6869bb0b145a4af0c5f64229f4460dd40ae07d3cb82f957
