[INFO] fetching crate openmm-sys 7.4.1...
[INFO] checking openmm-sys-7.4.1 against nightly-2024-02-05 for check-cfg
[INFO] extracting crate openmm-sys 7.4.1 into /workspace/builds/worker-0-tc1/source
[INFO] validating manifest of crates.io crate openmm-sys 7.4.1 on toolchain nightly-2024-02-05
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+nightly-2024-02-05" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking crates.io crate openmm-sys 7.4.1
[INFO] finished tweaking crates.io crate openmm-sys 7.4.1
[INFO] tweaked toml for crates.io crate openmm-sys 7.4.1 written to /workspace/builds/worker-0-tc1/source/Cargo.toml
[INFO] crate crates.io crate openmm-sys 7.4.1 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+nightly-2024-02-05" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded cc v1.0.59
[INFO] [stderr]   Downloaded cmake v0.1.44
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+nightly-2024-02-05" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 02250efff736571a99a077da63ca3259b933316ee0a592c6697b2d4be6d3f7c0
[INFO] running `Command { std: "docker" "start" "-a" "02250efff736571a99a077da63ca3259b933316ee0a592c6697b2d4be6d3f7c0", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "02250efff736571a99a077da63ca3259b933316ee0a592c6697b2d4be6d3f7c0", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "02250efff736571a99a077da63ca3259b933316ee0a592c6697b2d4be6d3f7c0", kill_on_drop: false }`
[INFO] [stdout] 02250efff736571a99a077da63ca3259b933316ee0a592c6697b2d4be6d3f7c0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+nightly-2024-02-05" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 76c2323fd752601de54d7506baac319bb2b2781735ebb11b32ea5d74c750333c
[INFO] running `Command { std: "docker" "start" "-a" "76c2323fd752601de54d7506baac319bb2b2781735ebb11b32ea5d74c750333c", kill_on_drop: false }`
[INFO] [stderr]    Compiling cc v1.0.59
[INFO] [stderr]    Compiling cmake v0.1.44
[INFO] [stderr]    Compiling openmm-sys v7.4.1 (/opt/rustwide/workdir)
[INFO] [stderr] The following warnings were emitted during compilation:
[INFO] [stderr] 
[INFO] [stderr] warning: openmm-sys@7.4.1: [OpenMM-sys] Dynamically linking against the OpenMM library.
[INFO] [stderr] 
[INFO] [stderr] error: failed to run custom build command for `openmm-sys v7.4.1 (/opt/rustwide/workdir)`
[INFO] [stderr] note: To improve backtraces for build dependencies, set the CARGO_PROFILE_DEV_BUILD_OVERRIDE_DEBUG=true environment variable to enable debug information generation.
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/target/debug/build/openmm-sys-19b915e701087451/build-script-build` (exit status: 101)
[INFO] [stderr]   --- stdout
[INFO] [stderr]   cargo:warning=[OpenMM-sys] Dynamically linking against the OpenMM library.
[INFO] [stderr]   running: cd "/opt/rustwide/target/debug/build/openmm-sys-0fd3f735f525d066/out/build" && CMAKE_PREFIX_PATH="" "cmake" "/opt/rustwide/workdir/openmm" "-DOPENMM_BUILD_PYTHON_WRAPPERS=OFF" "-DCMAKE_INSTALL_PREFIX=/opt/rustwide/target/debug/build/openmm-sys-0fd3f735f525d066/out" "-DCMAKE_C_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_C_COMPILER=/usr/bin/cc" "-DCMAKE_CXX_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_CXX_COMPILER=/usr/bin/c++" "-DCMAKE_ASM_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_ASM_COMPILER=/usr/bin/cc" "-DCMAKE_BUILD_TYPE=Release"
[INFO] [stderr]   -- Found PythonInterp: /usr/bin/python3.10 (found version "3.10.12") 
[INFO] [stderr]   -- The C compiler identification is GNU 11.4.0
[INFO] [stderr]   -- The CXX compiler identification is GNU 11.4.0
[INFO] [stderr]   -- Detecting C compiler ABI info
[INFO] [stderr]   -- Detecting C compiler ABI info - done
[INFO] [stderr]   -- Check for working C compiler: /usr/bin/cc - skipped
[INFO] [stderr]   -- Detecting C compile features
[INFO] [stderr]   -- Detecting C compile features - done
[INFO] [stderr]   -- Detecting CXX compiler ABI info
[INFO] [stderr]   -- Detecting CXX compiler ABI info - done
[INFO] [stderr]   -- Check for working CXX compiler: /usr/bin/c++ - skipped
[INFO] [stderr]   -- Detecting CXX compile features
[INFO] [stderr]   -- Detecting CXX compile features - done
[INFO] [stderr]   -- Configuring incomplete, errors occurred!
[INFO] [stderr]   See also "/opt/rustwide/target/debug/build/openmm-sys-0fd3f735f525d066/out/build/CMakeFiles/CMakeOutput.log".
[INFO] [stderr] 
[INFO] [stderr]   --- stderr
[INFO] [stderr]   fatal: not a git repository (or any parent up to mount point /opt/rustwide)
[INFO] [stderr]   Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set).
[INFO] [stderr]   CMake Deprecation Warning at CMakeLists.txt:25 (CMAKE_POLICY):
[INFO] [stderr]     The OLD behavior for policy CMP0042 will be removed from a future version
[INFO] [stderr]     of CMake.
[INFO] [stderr] 
[INFO] [stderr]     The cmake-policies(7) manual explains that the OLD behaviors of all
[INFO] [stderr]     policies are deprecated and that a policy should be set to OLD only under
[INFO] [stderr]     specific short-term circumstances.  Projects should be ported to the NEW
[INFO] [stderr]     behavior and not rely on setting a policy to OLD.
[INFO] [stderr] 
[INFO] [stderr] 
[INFO] [stderr]   CMake Error at /usr/share/cmake-3.22/Modules/FindPackageHandleStandardArgs.cmake:230 (message):
[INFO] [stderr]     Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE)
[INFO] [stderr]   Call Stack (most recent call first):
[INFO] [stderr]     /usr/share/cmake-3.22/Modules/FindPackageHandleStandardArgs.cmake:594 (_FPHSA_FAILURE_MESSAGE)
[INFO] [stderr]     /usr/share/cmake-3.22/Modules/FindDoxygen.cmake:646 (find_package_handle_standard_args)
[INFO] [stderr]     wrappers/CMakeLists.txt:1 (find_package)
[INFO] [stderr] 
[INFO] [stderr] 
[INFO] [stderr]   thread 'main' panicked at /opt/rustwide/cargo-home/registry/src/index.crates.io-6f17d22bba15001f/cmake-0.1.44/src/lib.rs:885:5:
[INFO] [stderr] 
[INFO] [stderr]   command did not execute successfully, got: exit status: 1
[INFO] [stderr] 
[INFO] [stderr]   build script failed, must exit now
[INFO] [stderr]   stack backtrace:
[INFO] [stderr]      0:     0x55f8e3d1af46 - <std::sys_common::backtrace::_print::DisplayBacktrace as core::fmt::Display>::fmt::hc2446d8aa0059188
[INFO] [stderr]      1:     0x55f8e3d40810 - core::fmt::write::had96bdeda7d49d3a
[INFO] [stderr]      2:     0x55f8e3d184ef - std::io::Write::write_fmt::h30b1f36eea05b391
[INFO] [stderr]      3:     0x55f8e3d1ad24 - std::sys_common::backtrace::print::h18fd3c71a95a3169
[INFO] [stderr]      4:     0x55f8e3d1c497 - std::panicking::default_hook::{{closure}}::ha3473f9bcb4e9a37
[INFO] [stderr]      5:     0x55f8e3d1c1f9 - std::panicking::default_hook::h23d9d43185db6584
[INFO] [stderr]      6:     0x55f8e3d1c928 - std::panicking::rust_panic_with_hook::h94aceaa7df3a6edd
[INFO] [stderr]      7:     0x55f8e3d1c802 - std::panicking::begin_panic_handler::{{closure}}::h9905d45d1d82fc42
[INFO] [stderr]      8:     0x55f8e3d1b446 - std::sys_common::backtrace::__rust_end_short_backtrace::hb02085545dc143b9
[INFO] [stderr]      9:     0x55f8e3d1c554 - rust_begin_unwind
[INFO] [stderr]     10:     0x55f8e3cad685 - core::panicking::panic_fmt::h6dca3983f8a9f4d0
[INFO] [stderr]     11:     0x55f8e3cbc911 - cmake::fail::h7812f12cb5f410ff
[INFO] [stderr]     12:     0x55f8e3cbc017 - cmake::run::he00996001488af48
[INFO] [stderr]     13:     0x55f8e3cb847c - cmake::Config::build::h40e64d2021aa9be3
[INFO] [stderr]     14:     0x55f8e3cb3abf - build_script_build::main::h8025ad3c0beb0ac8
[INFO] [stderr]     15:     0x55f8e3cae863 - core::ops::function::FnOnce::call_once::hfdba74ce8166f101
[INFO] [stderr]     16:     0x55f8e3cadea6 - std::sys_common::backtrace::__rust_begin_short_backtrace::hc03be9529ba19b65
[INFO] [stderr]     17:     0x55f8e3cae129 - std::rt::lang_start::{{closure}}::h4ca0f73826d688df
[INFO] [stderr]     18:     0x55f8e3d14171 - std::rt::lang_start_internal::h9989e088c48b7903
[INFO] [stderr]     19:     0x55f8e3cae107 - std::rt::lang_start::he0e97a635525500f
[INFO] [stderr]     20:     0x55f8e3cb3ff5 - main
[INFO] [stderr]     21:     0x7fe0a92e8d90 - <unknown>
[INFO] [stderr]     22:     0x7fe0a92e8e40 - __libc_start_main
[INFO] [stderr]     23:     0x55f8e3caddb5 - _start
[INFO] [stderr]     24:                0x0 - <unknown>
[INFO] running `Command { std: "docker" "inspect" "76c2323fd752601de54d7506baac319bb2b2781735ebb11b32ea5d74c750333c", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "76c2323fd752601de54d7506baac319bb2b2781735ebb11b32ea5d74c750333c", kill_on_drop: false }`
[INFO] [stdout] 76c2323fd752601de54d7506baac319bb2b2781735ebb11b32ea5d74c750333c
