[INFO] fetching crate opentools 0.1.2...
[INFO] documenting opentools-0.1.2 against 1.98.0-beta.8 for beta-rustdoc-1.99-1
[INFO] extracting crate opentools 0.1.2 into /workspace/builds/worker-7-tc1/source
[INFO] started tweaking crates.io crate opentools 0.1.2
[INFO] finished tweaking crates.io crate opentools 0.1.2
[INFO] tweaked toml for crates.io crate opentools 0.1.2 written to /workspace/builds/worker-7-tc1/source/Cargo.toml
[INFO] validating manifest of crates.io crate opentools 0.1.2 on toolchain 1.98.0-beta.8
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.98.0-beta.8" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate crates.io crate opentools 0.1.2 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.98.0-beta.8" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded seq_io v0.3.4
[INFO] [stderr]   Downloaded buffer-redux v1.0.2
[INFO] [stderr]   Downloaded scoped_threadpool v0.1.9
[INFO] [stderr]   Downloaded newtype_derive v0.1.6
[INFO] [stderr]   Downloaded rustc_version v0.1.7
[INFO] [stderr]   Downloaded fs-utils v1.1.4
[INFO] [stderr]   Downloaded derive-new v0.7.0
[INFO] [stderr]   Downloaded custom_derive v0.1.7
[INFO] [stderr]   Downloaded derive-new v0.6.0
[INFO] [stderr]   Downloaded linear-map v1.2.0
[INFO] [stderr]   Downloaded bio-types v1.0.4
[INFO] [stderr]   Downloaded ieee754 v0.2.6
[INFO] [stderr]   Downloaded semver v0.1.20
[INFO] [stderr]   Downloaded clap v4.6.4
[INFO] [stderr]   Downloaded rust-htslib v1.0.1
[INFO] [stderr]   Downloaded zlib-rs v0.6.6
[INFO] [stderr]   Downloaded bindgen v0.72.1
[INFO] [stderr]   Downloaded curl-sys v0.4.90+curl-8.21.0
[INFO] [stderr]   Downloaded hts-sys v2.2.1
[INFO] [stderr]   Downloaded openssl-src v300.6.1+3.6.3
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:00c5645b54fe3ce5dae1417175e3c7fb6a6646c021d554ecd63a097b8b9f3602" "sleep" "infinity", kill_on_drop: false }`
[INFO] [stdout] e494c28450657c3c8f0dd0ff0eff4d258db3c09bbe513a96a6aee7f1fd744d48
[INFO] running `Command { std: "docker" "start" "e494c28450657c3c8f0dd0ff0eff4d258db3c09bbe513a96a6aee7f1fd744d48", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "e494c28450657c3c8f0dd0ff0eff4d258db3c09bbe513a96a6aee7f1fd744d48", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "e494c28450657c3c8f0dd0ff0eff4d258db3c09bbe513a96a6aee7f1fd744d48" "/opt/rustwide/cargo-home/bin/cargo" "+1.98.0-beta.8" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "e494c28450657c3c8f0dd0ff0eff4d258db3c09bbe513a96a6aee7f1fd744d48", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-w" "/opt/rustwide/workdir" "--user" "0:0" "e494c28450657c3c8f0dd0ff0eff4d258db3c09bbe513a96a6aee7f1fd744d48" "/opt/rustwide/cargo-home/bin/cargo" "+1.98.0-beta.8" "doc" "--frozen" "--no-deps" "--document-private-items" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.107
[INFO] [stderr]    Compiling crossbeam-utils v0.8.22
[INFO] [stderr]    Compiling glob v0.3.4
[INFO] [stderr]    Compiling libc v0.2.189
[INFO] [stderr]    Compiling memchr v2.8.3
[INFO] [stderr]    Compiling minimal-lexical v0.2.1
[INFO] [stderr]    Compiling regex-syntax v0.8.11
[INFO] [stderr]    Compiling either v1.17.0
[INFO] [stderr]    Compiling bindgen v0.72.1
[INFO] [stderr]    Compiling itertools v0.13.0
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]    Compiling clang-sys v1.8.1
[INFO] [stderr]    Compiling bitflags v2.13.1
[INFO] [stderr]    Compiling quote v1.0.47
[INFO] [stderr]    Compiling quick-error v1.2.3
[INFO] [stderr]    Compiling rustc-hash v2.1.3
[INFO] [stderr]    Compiling crossbeam-deque v0.8.7
[INFO] [stderr]    Compiling rustversion v1.0.23
[INFO] [stderr]    Compiling syn v2.0.119
[INFO] [stderr]    Compiling syn v3.0.3
[INFO] [stderr]    Compiling nom v7.1.3
[INFO] [stderr]    Compiling fs-utils v1.1.4
[INFO] [stderr]     Checking crossbeam-epoch v0.9.20
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]     Checking aho-corasick v1.1.4
[INFO] [stderr]    Compiling thiserror v1.0.69
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling jobserver v0.1.35
[INFO] [stderr]    Compiling cc v1.4.0
[INFO] [stderr]    Compiling regex-automata v0.4.16
[INFO] [stderr]    Compiling cmake v0.1.58
[INFO] [stderr]    Compiling openssl-src v300.6.1+3.6.3
[INFO] [stderr]    Compiling cexpr v0.6.0
[INFO] [stderr]    Compiling portable-atomic v1.14.0
[INFO] [stderr]    Compiling serde v1.0.229
[INFO] [stderr]    Compiling openssl-sys v0.9.117
[INFO] [stderr]    Compiling libz-sys v1.1.29
[INFO] [stderr]    Compiling curl-sys v0.4.90+curl-8.21.0
[INFO] [stderr]    Compiling bzip2-sys v0.1.13+1.0.8
[INFO] [stderr]    Compiling lzma-sys v0.1.20
[INFO] [stderr]    Compiling regex v1.13.1
[INFO] [stderr]    Compiling thiserror v2.0.19
[INFO] [stderr]     Checking unicode-width v0.2.2
[INFO] [stderr]     Checking clap_builder v4.6.2
[INFO] [stderr]     Checking console v0.16.4
[INFO] [stderr]    Compiling synstructure v0.13.2
[INFO] [stderr]    Compiling displaydoc v0.2.7
[INFO] [stderr]    Compiling thiserror-impl v2.0.19
[INFO] [stderr]    Compiling serde_derive v1.0.229
[INFO] [stderr]    Compiling clap_derive v4.6.4
[INFO] [stderr]    Compiling zerofrom-derive v0.1.7
[INFO] [stderr]    Compiling yoke-derive v0.8.2
[INFO] [stderr]    Compiling zerovec-derive v0.11.3
[INFO] [stderr]     Checking zerofrom v0.1.8
[INFO] [stderr]    Compiling thiserror-impl v1.0.69
[INFO] [stderr]     Checking yoke v0.8.3
[INFO] [stderr]    Compiling derive-new v0.6.0
[INFO] [stderr]    Compiling strum_macros v0.26.4
[INFO] [stderr]     Checking zerovec v0.11.6
[INFO] [stderr]     Checking zerotrie v0.2.4
[INFO] [stderr]    Compiling derive-new v0.7.0
[INFO] [stderr]     Checking tinystr v0.8.3
[INFO] [stderr]     Checking icu_locale_core v2.2.0
[INFO] [stderr]     Checking potential_utf v0.1.5
[INFO] [stderr]     Checking icu_collections v2.2.0
[INFO] [stderr]     Checking rayon-core v1.13.0
[INFO] [stderr]     Checking parking_lot_core v0.9.12
[INFO] [stderr]     Checking crossbeam-queue v0.3.13
[INFO] [stderr]     Checking crossbeam-channel v0.5.16
[INFO] [stderr]     Checking buffer-redux v1.0.2
[INFO] [stderr]     Checking custom_derive v0.1.7
[INFO] [stderr]     Checking ieee754 v0.2.6
[INFO] [stderr]     Checking byteorder v1.5.0
[INFO] [stderr]     Checking scoped_threadpool v0.1.9
[INFO] [stderr]     Checking zlib-rs v0.6.6
[INFO] [stderr]     Checking unit-prefix v0.5.2
[INFO] [stderr]     Checking icu_provider v2.2.0
[INFO] [stderr]     Checking linear-map v1.2.0
[INFO] [stderr]     Checking crossbeam v0.8.4
[INFO] [stderr]     Checking indicatif v0.18.6
[INFO] [stderr]     Checking dashmap v6.2.1
[INFO] [stderr]     Checking icu_normalizer v2.2.0
[INFO] [stderr]     Checking icu_properties v2.2.0
[INFO] [stderr]     Checking bio-types v1.0.4
[INFO] [stderr]     Checking seq_io v0.3.4
[INFO] [stderr]     Checking rayon v1.12.0
[INFO] [stderr]     Checking clap v4.6.4
[INFO] [stderr]     Checking itertools v0.14.0
[INFO] [stderr]     Checking sysinfo v0.38.4
[INFO] [stderr]     Checking flate2 v1.1.9
[INFO] [stderr]     Checking idna_adapter v1.2.2
[INFO] [stderr]     Checking idna v1.1.0
[INFO] [stderr]     Checking url v2.5.8
[INFO] [stderr]    Compiling hts-sys v2.2.1
[INFO] [stderr]     Checking rust-htslib v1.0.1
[INFO] [stderr]  Documenting opentools v0.1.2 (/opt/rustwide/workdir)
[INFO] [stdout] warning: unresolved link to `ATGCNRYMKSWHBVD`
[INFO] [stdout]   --> src/argparse/touchbarcode.rs:68:18
[INFO] [stdout]    |
[INFO] [stdout] 68 |     /// Regex: ^[ATGCNRYMKSWHBVD]+$
[INFO] [stdout]    |                  ^^^^^^^^^^^^^^^ no item named `ATGCNRYMKSWHBVD` in scope
[INFO] [stdout]    |
[INFO] [stdout]    = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout]    = note: `#[warn(rustdoc::broken_intra_doc_links)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `ATGCNRYMKSWHBVD`
[INFO] [stdout]   --> src/argparse/tilesmatch.rs:82:18
[INFO] [stdout]    |
[INFO] [stdout] 82 |     /// Regex: ^[ATGCNRYMKSWHBVD]+$
[INFO] [stdout]    |                  ^^^^^^^^^^^^^^^ no item named `ATGCNRYMKSWHBVD` in scope
[INFO] [stdout]    |
[INFO] [stdout]    = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `ATGCNRYMKSWHBVD`
[INFO] [stdout]   --> src/argparse/add_bc.rs:53:18
[INFO] [stdout]    |
[INFO] [stdout] 53 |     /// Regex: ^[ATGCNRYMKSWHBVD]+$
[INFO] [stdout]    |                  ^^^^^^^^^^^^^^^ no item named `ATGCNRYMKSWHBVD` in scope
[INFO] [stdout]    |
[INFO] [stdout]    = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `ATGCNRYMKSWHBVD`
[INFO] [stdout]   --> src/argparse/stats_bc.rs:55:18
[INFO] [stdout]    |
[INFO] [stdout] 55 |     /// Regex: ^[ATGCNRYMKSWHBVD]+$
[INFO] [stdout]    |                  ^^^^^^^^^^^^^^^ no item named `ATGCNRYMKSWHBVD` in scope
[INFO] [stdout]    |
[INFO] [stdout]    = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 7m 08s
[INFO] [stderr]    Generated /opt/rustwide/target/doc/opentools/index.html
[INFO] running `Command { std: "docker" "inspect" "e494c28450657c3c8f0dd0ff0eff4d258db3c09bbe513a96a6aee7f1fd744d48", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "DOCS_RS=1" "-e" "RUSTC_BOOTSTRAP=1" "-w" "/opt/rustwide/workdir" "--user" "0:0" "e494c28450657c3c8f0dd0ff0eff4d258db3c09bbe513a96a6aee7f1fd744d48" "/opt/rustwide/cargo-home/bin/cargo" "+1.98.0-beta.8" "rustdoc" "--lib" "-Zrustdoc-map" "--config" "build.rustdocflags=[\"--cfg\", \"docsrs\", \"-Z\", \"unstable-options\", \"--document-private-items\"]" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.107
[INFO] [stderr]    Compiling thiserror v1.0.69
[INFO] [stderr]    Compiling thiserror v2.0.19
[INFO] [stderr]    Compiling quote v1.0.47
[INFO] [stderr]    Compiling syn v2.0.119
[INFO] [stderr]    Compiling syn v3.0.3
[INFO] [stderr]    Compiling displaydoc v0.2.7
[INFO] [stderr]    Compiling thiserror-impl v2.0.19
[INFO] [stderr]    Compiling serde_derive v1.0.229
[INFO] [stderr]    Compiling clap_derive v4.6.4
[INFO] [stderr]    Compiling synstructure v0.13.2
[INFO] [stderr]    Compiling bindgen v0.72.1
[INFO] [stderr]     Checking clap v4.6.4
[INFO] [stderr]    Compiling zerofrom-derive v0.1.7
[INFO] [stderr]    Compiling yoke-derive v0.8.2
[INFO] [stderr]    Compiling zerovec-derive v0.11.3
[INFO] [stderr]    Compiling thiserror-impl v1.0.69
[INFO] [stderr]    Compiling strum_macros v0.26.4
[INFO] [stderr]    Compiling derive-new v0.6.0
[INFO] [stderr]    Compiling derive-new v0.7.0
[INFO] [stderr]     Checking zerofrom v0.1.8
[INFO] [stderr]     Checking yoke v0.8.3
[INFO] [stderr]     Checking seq_io v0.3.4
[INFO] [stderr]     Checking bio-types v1.0.4
[INFO] [stderr]     Checking zerovec v0.11.6
[INFO] [stderr]     Checking zerotrie v0.2.4
[INFO] [stderr]     Checking tinystr v0.8.3
[INFO] [stderr]     Checking potential_utf v0.1.5
[INFO] [stderr]     Checking icu_collections v2.2.0
[INFO] [stderr]     Checking icu_locale_core v2.2.0
[INFO] [stderr]     Checking icu_provider v2.2.0
[INFO] [stderr]     Checking icu_properties v2.2.0
[INFO] [stderr]     Checking icu_normalizer v2.2.0
[INFO] [stderr]    Compiling hts-sys v2.2.1
[INFO] [stderr]     Checking idna_adapter v1.2.2
[INFO] [stderr]     Checking idna v1.1.0
[INFO] [stderr]     Checking url v2.5.8
[INFO] [stderr]     Checking rust-htslib v1.0.1
[INFO] [stderr]  Documenting opentools v0.1.2 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 54.51s
[INFO] [stderr]    Generated /opt/rustwide/target/doc/opentools/index.html
[INFO] running `Command { std: "docker" "inspect" "e494c28450657c3c8f0dd0ff0eff4d258db3c09bbe513a96a6aee7f1fd744d48", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "e494c28450657c3c8f0dd0ff0eff4d258db3c09bbe513a96a6aee7f1fd744d48", kill_on_drop: false }`
[INFO] [stdout] e494c28450657c3c8f0dd0ff0eff4d258db3c09bbe513a96a6aee7f1fd744d48
