[INFO] cloning repository https://github.com/MrObadiahEJ/NeuroKmer [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/MrObadiahEJ/NeuroKmer" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FMrObadiahEJ%2FNeuroKmer", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FMrObadiahEJ%2FNeuroKmer'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] b9a9ec248f411710f52bc2370358b9f556bfb9a3 [INFO] documenting MrObadiahEJ/NeuroKmer against 1.98.0-beta.8 for beta-rustdoc-1.99-1 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FMrObadiahEJ%2FNeuroKmer" "/workspace/builds/worker-7-tc1/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-7-tc1/source'... [INFO] [stderr] done. [INFO] started tweaking git repo https://github.com/MrObadiahEJ/NeuroKmer [INFO] finished tweaking git repo https://github.com/MrObadiahEJ/NeuroKmer [INFO] tweaked toml for git repo https://github.com/MrObadiahEJ/NeuroKmer written to /workspace/builds/worker-7-tc1/source/Cargo.toml [INFO] validating manifest of git repo https://github.com/MrObadiahEJ/NeuroKmer on toolchain 1.98.0-beta.8 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.98.0-beta.8" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate git repo https://github.com/MrObadiahEJ/NeuroKmer already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.98.0-beta.8" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded unicode-ident v1.0.23 [INFO] [stderr] Downloaded rand_core v0.10.0 [INFO] [stderr] Downloaded getrandom v0.4.1 [INFO] [stderr] Downloaded page_size v0.6.0 [INFO] [stderr] Downloaded plotters-svg v0.3.7 [INFO] [stderr] Downloaded cast v0.3.0 [INFO] [stderr] Downloaded alloca v0.4.0 [INFO] [stderr] Downloaded derefable v0.1.0 [INFO] [stderr] Downloaded env_filter v1.0.0 [INFO] [stderr] Downloaded semver v0.1.20 [INFO] [stderr] Downloaded enum-map-derive v0.17.0 [INFO] [stderr] Downloaded custom_derive v0.1.7 [INFO] [stderr] Downloaded newtype_derive v0.1.6 [INFO] [stderr] Downloaded rustc_version v0.1.7 [INFO] [stderr] Downloaded anes v0.1.6 [INFO] [stderr] Downloaded itertools-num v0.1.3 [INFO] [stderr] Downloaded criterion-plot v0.8.2 [INFO] [stderr] Downloaded env_logger v0.11.9 [INFO] [stderr] Downloaded rand v0.10.0 [INFO] [stderr] Downloaded clap_lex v1.0.0 [INFO] [stderr] Downloaded editdistancek v1.0.2 [INFO] [stderr] Downloaded getset v0.1.6 [INFO] [stderr] Downloaded multimap v0.10.1 [INFO] [stderr] Downloaded derive-new v0.6.0 [INFO] [stderr] Downloaded plotters-backend v0.3.7 [INFO] [stderr] Downloaded oorandom v11.1.5 [INFO] [stderr] Downloaded enum-map v2.7.3 [INFO] [stderr] Downloaded clap_derive v4.5.55 [INFO] [stderr] Downloaded strum_macros v0.26.4 [INFO] [stderr] Downloaded buffer-redux v1.1.0 [INFO] [stderr] Downloaded ordered-float v5.1.0 [INFO] [stderr] Downloaded csv-core v0.1.13 [INFO] [stderr] Downloaded triple_accel v0.4.0 [INFO] [stderr] Downloaded chacha20 v0.10.0 [INFO] [stderr] Downloaded matrixmultiply v0.3.10 [INFO] [stderr] Downloaded liblzma v0.3.6 [INFO] [stderr] Downloaded tinytemplate v1.2.1 [INFO] [stderr] Downloaded portable-atomic-util v0.2.5 [INFO] [stderr] Downloaded bio-types v1.0.4 [INFO] [stderr] Downloaded anyhow v1.0.101 [INFO] [stderr] Downloaded clap v4.5.58 [INFO] [stderr] Downloaded simba v0.9.1 [INFO] [stderr] Downloaded safe_arch v0.7.4 [INFO] [stderr] Downloaded jiff-static v0.2.20 [INFO] [stderr] Downloaded cc v1.2.56 [INFO] [stderr] Downloaded wide v0.7.33 [INFO] [stderr] Downloaded zerocopy-derive v0.8.39 [INFO] [stderr] Downloaded criterion v0.8.2 [INFO] [stderr] Downloaded plotters v0.3.7 [INFO] [stderr] Downloaded statrs v0.18.0 [INFO] [stderr] Downloaded clap_builder v4.5.58 [INFO] [stderr] Downloaded syn v2.0.115 [INFO] [stderr] Downloaded blake3 v1.8.3 [INFO] [stderr] Downloaded bio v3.0.0 [INFO] [stderr] Downloaded ndarray v0.17.2 [INFO] [stderr] Downloaded zerocopy v0.8.39 [INFO] [stderr] Downloaded ndarray v0.16.1 [INFO] [stderr] Downloaded regex-syntax v0.8.9 [INFO] [stderr] Downloaded nalgebra v0.33.2 [INFO] [stderr] Downloaded needletail v0.6.3 [INFO] [stderr] Downloaded jiff v0.2.20 [INFO] [stderr] Downloaded libc v0.2.182 [INFO] [stderr] Downloaded petgraph v0.8.3 [INFO] [stderr] Downloaded csv v1.4.0 [INFO] [stderr] Downloaded liblzma-sys v0.3.13 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:00c5645b54fe3ce5dae1417175e3c7fb6a6646c021d554ecd63a097b8b9f3602" "sleep" "infinity", kill_on_drop: false }` [INFO] [stdout] 15d073d4429d0a0661783288a46ddacb68cb157283d82fa2fb3896dfa021e9d3 [INFO] running `Command { std: "docker" "start" "15d073d4429d0a0661783288a46ddacb68cb157283d82fa2fb3896dfa021e9d3", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "15d073d4429d0a0661783288a46ddacb68cb157283d82fa2fb3896dfa021e9d3", kill_on_drop: false }` [INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "15d073d4429d0a0661783288a46ddacb68cb157283d82fa2fb3896dfa021e9d3" "/opt/rustwide/cargo-home/bin/cargo" "+1.98.0-beta.8" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "15d073d4429d0a0661783288a46ddacb68cb157283d82fa2fb3896dfa021e9d3", kill_on_drop: false }` [INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-w" "/opt/rustwide/workdir" "--user" "0:0" "15d073d4429d0a0661783288a46ddacb68cb157283d82fa2fb3896dfa021e9d3" "/opt/rustwide/cargo-home/bin/cargo" "+1.98.0-beta.8" "doc" "--frozen" "--no-deps" "--document-private-items" "--message-format=json", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.182 [INFO] [stderr] Compiling proc-macro2 v1.0.106 [INFO] [stderr] Compiling quote v1.0.44 [INFO] [stderr] Compiling unicode-ident v1.0.23 [INFO] [stderr] Compiling find-msvc-tools v0.1.9 [INFO] [stderr] Compiling autocfg v1.5.0 [INFO] [stderr] Compiling shlex v1.3.0 [INFO] [stderr] Checking cfg-if v1.0.4 [INFO] [stderr] Compiling libm v0.2.16 [INFO] [stderr] Compiling pkg-config v0.3.32 [INFO] [stderr] Checking memchr v2.8.0 [INFO] [stderr] Compiling zerocopy v0.8.39 [INFO] [stderr] Compiling serde_core v1.0.228 [INFO] [stderr] Compiling crossbeam-utils v0.8.21 [INFO] [stderr] Compiling serde v1.0.228 [INFO] [stderr] Compiling paste v1.0.15 [INFO] [stderr] Checking bytemuck v1.25.0 [INFO] [stderr] Compiling proc-macro2 v0.4.30 [INFO] [stderr] Checking regex-syntax v0.8.9 [INFO] [stderr] Compiling heck v0.5.0 [INFO] [stderr] Checking utf8parse v0.2.2 [INFO] [stderr] Compiling typenum v1.19.0 [INFO] [stderr] Compiling rustversion v1.0.22 [INFO] [stderr] Checking safe_arch v0.7.4 [INFO] [stderr] Compiling num-traits v0.2.19 [INFO] [stderr] Compiling matrixmultiply v0.3.10 [INFO] [stderr] Checking aho-corasick v1.1.4 [INFO] [stderr] Compiling unicode-xid v0.1.0 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Checking anstyle-parse v0.2.7 [INFO] [stderr] Checking wide v0.7.33 [INFO] [stderr] Checking anstyle-query v1.1.5 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Checking anstyle v1.0.13 [INFO] [stderr] Compiling syn v0.15.44 [INFO] [stderr] Compiling crc32fast v1.5.0 [INFO] [stderr] Compiling zstd-safe v7.2.4 [INFO] [stderr] Checking is_terminal_polyfill v1.70.2 [INFO] [stderr] Checking colorchoice v1.0.4 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling bv v0.11.1 [INFO] [stderr] Compiling quote v0.6.13 [INFO] [stderr] Checking anstream v0.6.21 [INFO] [stderr] Checking crossbeam-epoch v0.9.18 [INFO] [stderr] Checking hashbrown v0.16.1 [INFO] [stderr] Compiling anyhow v1.0.101 [INFO] [stderr] Compiling getrandom v0.4.1 [INFO] [stderr] Checking foldhash v0.1.5 [INFO] [stderr] Checking adler2 v2.0.1 [INFO] [stderr] Compiling thiserror v2.0.18 [INFO] [stderr] Checking either v1.15.0 [INFO] [stderr] Compiling syn v2.0.115 [INFO] [stderr] Compiling parking_lot_core v0.9.12 [INFO] [stderr] Checking getrandom v0.2.17 [INFO] [stderr] Compiling jobserver v0.1.34 [INFO] [stderr] Compiling proc-macro-error-attr2 v2.0.0 [INFO] [stderr] Compiling rayon-core v1.13.0 [INFO] [stderr] Checking rand_core v0.6.4 [INFO] [stderr] Checking simd-adler32 v0.3.8 [INFO] [stderr] Checking rand_core v0.10.0 [INFO] [stderr] Checking hashbrown v0.15.5 [INFO] [stderr] Checking num-integer v0.1.46 [INFO] [stderr] Checking num-complex v0.4.6 [INFO] [stderr] Checking approx v0.5.1 [INFO] [stderr] Checking miniz_oxide v0.8.9 [INFO] [stderr] Checking crossbeam-deque v0.8.6 [INFO] [stderr] Checking indexmap v2.13.0 [INFO] [stderr] Compiling cc v1.2.56 [INFO] [stderr] Checking num-rational v0.4.2 [INFO] [stderr] Checking csv-core v0.1.13 [INFO] [stderr] Checking cpufeatures v0.3.0 [INFO] [stderr] Checking bit-vec v0.8.0 [INFO] [stderr] Checking lazy_static v1.5.0 [INFO] [stderr] Checking clap_lex v1.0.0 [INFO] [stderr] Checking strsim v0.11.1 [INFO] [stderr] Checking fixedbitset v0.5.7 [INFO] [stderr] Checking log v0.4.29 [INFO] [stderr] Checking scopeguard v1.2.0 [INFO] [stderr] Checking byteorder v1.5.0 [INFO] [stderr] Checking smallvec v1.15.1 [INFO] [stderr] Checking itoa v1.0.17 [INFO] [stderr] Checking ryu v1.0.23 [INFO] [stderr] Checking bytecount v0.6.9 [INFO] [stderr] Checking lock_api v0.4.14 [INFO] [stderr] Checking flate2 v1.1.9 [INFO] [stderr] Checking clap_builder v4.5.58 [INFO] [stderr] Checking bit-set v0.8.0 [INFO] [stderr] Checking ndarray v0.16.1 [INFO] [stderr] Checking chacha20 v0.10.0 [INFO] [stderr] Checking fxhash v0.2.1 [INFO] [stderr] Checking petgraph v0.8.3 [INFO] [stderr] Checking simba v0.9.1 [INFO] [stderr] Checking itertools v0.14.0 [INFO] [stderr] Checking regex-automata v0.4.14 [INFO] [stderr] Checking ordered-float v5.1.0 [INFO] [stderr] Checking itertools-num v0.1.3 [INFO] [stderr] Checking buffer-redux v1.1.0 [INFO] [stderr] Checking custom_derive v0.1.7 [INFO] [stderr] Checking strum v0.26.3 [INFO] [stderr] Checking cpufeatures v0.2.17 [INFO] [stderr] Checking editdistancek v1.0.2 [INFO] [stderr] Checking hashbrown v0.14.5 [INFO] [stderr] Checking constant_time_eq v0.4.2 [INFO] [stderr] Checking arrayref v0.3.9 [INFO] [stderr] Checking arrayvec v0.7.6 [INFO] [stderr] Checking triple_accel v0.4.0 [INFO] [stderr] Checking jiff v0.2.20 [INFO] [stderr] Checking rayon v1.11.0 [INFO] [stderr] Checking rand v0.10.0 [INFO] [stderr] Checking dashmap v6.1.0 [INFO] [stderr] error: could not compile `serde_core` (lib) [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/rustup-home/toolchains/1.98.0-beta.8-x86_64-unknown-linux-gnu/bin/rustc --crate-name serde_core --edition=2021 /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/serde_core-1.0.228/src/lib.rs --error-format=json --json=diagnostic-rendered-ansi,artifacts,future-incompat --crate-type lib --emit=dep-info,metadata -C embed-bitcode=no -C debuginfo=2 --cfg 'feature="default"' --cfg 'feature="result"' --cfg 'feature="std"' --check-cfg 'cfg(docsrs,test)' --check-cfg 'cfg(feature, values("alloc", "default", "rc", "result", "std", "unstable"))' -C metadata=7e12b2503ba1bf84 -C extra-filename=-db3ea3205efb6793 --out-dir /opt/rustwide/target/debug/deps -L dependency=/opt/rustwide/target/debug/deps --cap-lints allow --cap-lints=warn --check-cfg 'cfg(if_docsrs_then_no_serde_core)' --check-cfg 'cfg(no_core_cstr)' --check-cfg 'cfg(no_core_error)' --check-cfg 'cfg(no_core_net)' --check-cfg 'cfg(no_core_num_saturating)' --check-cfg 'cfg(no_diagnostic_namespace)' --check-cfg 'cfg(no_serde_derive)' --check-cfg 'cfg(no_std_atomic)' --check-cfg 'cfg(no_std_atomic64)' --check-cfg 'cfg(no_target_has_atomic)'` (signal: 9, SIGKILL: kill) [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: could not compile `zerocopy` (lib) [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/rustup-home/toolchains/1.98.0-beta.8-x86_64-unknown-linux-gnu/bin/rustc --crate-name zerocopy --edition=2021 /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/zerocopy-0.8.39/src/lib.rs --error-format=json --json=diagnostic-rendered-ansi,artifacts,future-incompat --crate-type lib --emit=dep-info,metadata -C embed-bitcode=no -C debuginfo=2 --cfg 'feature="simd"' --check-cfg 'cfg(docsrs,test)' --check-cfg 'cfg(feature, values("__internal_use_only_features_that_work_on_stable", "alloc", "derive", "float-nightly", "simd", "simd-nightly", "std", "zerocopy-derive"))' -C metadata=00bd7692ef3219b8 -C extra-filename=-71ae14adfa8d4ca1 --out-dir /opt/rustwide/target/debug/deps -L dependency=/opt/rustwide/target/debug/deps --cap-lints allow --cap-lints=warn --check-cfg 'cfg(no_zerocopy_simd_x86_avx12_1_89_0)' --check-cfg 'cfg(rust, values("1.89.0"))' --check-cfg 'cfg(no_zerocopy_core_error_1_81_0)' --check-cfg 'cfg(rust, values("1.81.0"))' --check-cfg 'cfg(no_zerocopy_diagnostic_on_unimplemented_1_78_0)' --check-cfg 'cfg(rust, values("1.78.0"))' --check-cfg 'cfg(no_zerocopy_generic_bounds_in_const_fn_1_61_0)' --check-cfg 'cfg(rust, values("1.61.0"))' --check-cfg 'cfg(no_zerocopy_target_has_atomics_1_60_0)' --check-cfg 'cfg(rust, values("1.60.0"))' --check-cfg 'cfg(no_zerocopy_aarch64_simd_1_59_0)' --check-cfg 'cfg(rust, values("1.59.0"))' --check-cfg 'cfg(no_zerocopy_panic_in_const_and_vec_try_reserve_1_57_0)' --check-cfg 'cfg(rust, values("1.57.0"))' --check-cfg 'cfg(doc_cfg)' --check-cfg 'cfg(kani)' --check-cfg 'cfg(__ZEROCOPY_INTERNAL_USE_ONLY_NIGHTLY_FEATURES_IN_TESTS)' --check-cfg 'cfg(__ZEROCOPY_INTERNAL_USE_ONLY_DEV_MODE)' --check-cfg 'cfg(coverage_nightly)'` (signal: 9, SIGKILL: kill) [INFO] running `Command { std: "docker" "inspect" "15d073d4429d0a0661783288a46ddacb68cb157283d82fa2fb3896dfa021e9d3", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "15d073d4429d0a0661783288a46ddacb68cb157283d82fa2fb3896dfa021e9d3", kill_on_drop: false }` [INFO] [stdout] 15d073d4429d0a0661783288a46ddacb68cb157283d82fa2fb3896dfa021e9d3