[INFO] cloning repository https://github.com/slazicoicr/bam_histogram_qc
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/slazicoicr/bam_histogram_qc" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fslazicoicr%2Fbam_histogram_qc", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fslazicoicr%2Fbam_histogram_qc'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 73ee3528cb6a555df461966bbdb6ddb85b23fb9d
[INFO] documenting slazicoicr/bam_histogram_qc against 1.98.0-beta.1 for beta-rustdoc-1.98-1
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fslazicoicr%2Fbam_histogram_qc" "/workspace/builds/worker-1-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-1-tc2/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/slazicoicr/bam_histogram_qc
[INFO] finished tweaking git repo https://github.com/slazicoicr/bam_histogram_qc
[INFO] tweaked toml for git repo https://github.com/slazicoicr/bam_histogram_qc written to /workspace/builds/worker-1-tc2/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/slazicoicr/bam_histogram_qc on toolchain 1.98.0-beta.1
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.98.0-beta.1" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.98.0-beta.1" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]      Locking 92 packages to latest compatible versions
[INFO] [stderr]       Adding clap v2.33.4 (available: v2.34.0)
[INFO] [stderr]       Adding rust-htslib v0.32.0 (available: v1.0.1)
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.98.0-beta.1" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:3d5ced03c013a94a2f102a4510f48a6e9184255caf5fd8244f58017bde7f5210" "sleep" "infinity", kill_on_drop: false }`
[INFO] [stdout] 2908d8945c91d8e459ab026fbe209b1d15fde4739abb1d78dcfcc09993bbaf20
[INFO] running `Command { std: "docker" "start" "2908d8945c91d8e459ab026fbe209b1d15fde4739abb1d78dcfcc09993bbaf20", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "2908d8945c91d8e459ab026fbe209b1d15fde4739abb1d78dcfcc09993bbaf20", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "2908d8945c91d8e459ab026fbe209b1d15fde4739abb1d78dcfcc09993bbaf20" "/opt/rustwide/cargo-home/bin/cargo" "+1.98.0-beta.1" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "2908d8945c91d8e459ab026fbe209b1d15fde4739abb1d78dcfcc09993bbaf20", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-w" "/opt/rustwide/workdir" "--user" "0:0" "2908d8945c91d8e459ab026fbe209b1d15fde4739abb1d78dcfcc09993bbaf20" "/opt/rustwide/cargo-home/bin/cargo" "+1.98.0-beta.1" "doc" "--frozen" "--no-deps" "--document-private-items" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.186
[INFO] [stderr]    Compiling pkg-config v0.3.33
[INFO] [stderr]     Checking litemap v0.8.2
[INFO] [stderr]     Checking writeable v0.6.3
[INFO] [stderr]    Compiling icu_normalizer_data v2.2.0
[INFO] [stderr]    Compiling icu_properties_data v2.2.0
[INFO] [stderr]    Compiling syn v2.0.118
[INFO] [stderr]    Compiling quick-error v1.2.3
[INFO] [stderr]    Compiling rustversion v1.0.23
[INFO] [stderr]     Checking smallvec v1.15.2
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]    Compiling fs-utils v1.1.4
[INFO] [stderr]     Checking regex-automata v0.4.15
[INFO] [stderr]     Checking percent-encoding v2.3.2
[INFO] [stderr]    Compiling zmij v1.0.22
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]     Checking form_urlencoded v1.2.2
[INFO] [stderr]    Compiling serde v1.0.228
[INFO] [stderr]    Compiling serde_json v1.0.150
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]     Checking textwrap v0.11.0
[INFO] [stderr]     Checking ansi_term v0.11.0
[INFO] [stderr]     Checking linear-map v1.2.0
[INFO] [stderr]     Checking custom_derive v0.1.7
[INFO] [stderr]     Checking ieee754 v0.2.6
[INFO] [stderr]    Compiling jobserver v0.1.35
[INFO] [stderr]     Checking atty v0.2.14
[INFO] [stderr]     Checking clap v2.33.4
[INFO] [stderr]    Compiling cc v1.2.67
[INFO] [stderr]    Compiling synstructure v0.13.2
[INFO] [stderr]     Checking regex v1.13.0
[INFO] [stderr]    Compiling zerovec-derive v0.11.3
[INFO] [stderr]    Compiling displaydoc v0.2.6
[INFO] [stderr]    Compiling thiserror-impl v1.0.69
[INFO] [stderr]    Compiling strum_macros v0.26.4
[INFO] [stderr]    Compiling zerofrom-derive v0.1.7
[INFO] [stderr]    Compiling yoke-derive v0.8.2
[INFO] [stderr]    Compiling openssl-src v300.6.1+3.6.3
[INFO] [stderr]     Checking zerofrom v0.1.8
[INFO] [stderr]    Compiling derive-new v0.6.0
[INFO] [stderr]    Compiling serde_derive v1.0.228
[INFO] [stderr]     Checking yoke v0.8.3
[INFO] [stderr]    Compiling openssl-sys v0.9.117
[INFO] [stderr]    Compiling libz-sys v1.1.29
[INFO] [stderr]    Compiling lzma-sys v0.1.20
[INFO] [stderr]    Compiling bzip2-sys v0.1.13+1.0.8
[INFO] [stderr]     Checking zerovec v0.11.6
[INFO] [stderr]     Checking zerotrie v0.2.4
[INFO] [stderr]    Compiling curl-sys v0.4.90+curl-8.21.0
[INFO] [stderr]    Compiling hts-sys v1.10.3
[INFO] [stderr]     Checking thiserror v1.0.69
[INFO] [stderr]     Checking tinystr v0.8.3
[INFO] [stderr]     Checking potential_utf v0.1.5
[INFO] [stderr]     Checking icu_collections v2.2.0
[INFO] [stderr]     Checking icu_locale_core v2.2.0
[INFO] [stderr]     Checking bio-types v1.0.4
[INFO] [stderr]     Checking icu_provider v2.2.0
[INFO] [stderr]     Checking icu_properties v2.2.0
[INFO] [stderr]     Checking icu_normalizer v2.2.0
[INFO] [stderr]     Checking idna_adapter v1.2.2
[INFO] [stderr]     Checking idna v1.1.0
[INFO] [stderr]     Checking url v2.5.8
[ERROR] error running command: no output for 300 seconds
[INFO] running `Command { std: "docker" "inspect" "2908d8945c91d8e459ab026fbe209b1d15fde4739abb1d78dcfcc09993bbaf20", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "2908d8945c91d8e459ab026fbe209b1d15fde4739abb1d78dcfcc09993bbaf20", kill_on_drop: false }`
[INFO] [stdout] 2908d8945c91d8e459ab026fbe209b1d15fde4739abb1d78dcfcc09993bbaf20
