[INFO] cloning repository https://github.com/PhantasticUniverse/cell-simulator-x
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/PhantasticUniverse/cell-simulator-x" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FPhantasticUniverse%2Fcell-simulator-x", kill_on_drop: false }`
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[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 4feadc781eb2c7d560dcaa89260cb7be861a86bb
[INFO] documenting PhantasticUniverse/cell-simulator-x against 1.97.0-beta.6 for beta-rustdoc-1.98-1
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FPhantasticUniverse%2Fcell-simulator-x" "/workspace/builds/worker-6-tc1/source", kill_on_drop: false }`
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[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/PhantasticUniverse/cell-simulator-x
[INFO] finished tweaking git repo https://github.com/PhantasticUniverse/cell-simulator-x
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[INFO] validating manifest of git repo https://github.com/PhantasticUniverse/cell-simulator-x on toolchain 1.97.0-beta.6
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.97.0-beta.6" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/PhantasticUniverse/cell-simulator-x already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.97.0-beta.6" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
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[INFO] running `Command { std: "docker" "inspect" "56b6cce4ffd36a069a3061e21e70960fa916d782d8da443dd82aa3f590cb7aa8", kill_on_drop: false }`
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[INFO] [stdout] warning: unresolved link to `S`
[INFO] [stdout]   --> src/biochemistry/enzyme.rs:74:17
[INFO] [stdout]    |
[INFO] [stdout] 74 | /// v = Vmax * [S] / (Km + [S])
[INFO] [stdout]    |                 ^ no item named `S` in scope
[INFO] [stdout]    |
[INFO] [stdout]    = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout]    = note: `#[warn(rustdoc::broken_intra_doc_links)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `S`
[INFO] [stdout]   --> src/biochemistry/enzyme.rs:74:29
[INFO] [stdout]    |
[INFO] [stdout] 74 | /// v = Vmax * [S] / (Km + [S])
[INFO] [stdout]    |                             ^ no item named `S` in scope
[INFO] [stdout]    |
[INFO] [stdout]    = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `S`
[INFO] [stdout]   --> src/biochemistry/enzyme.rs:93:17
[INFO] [stdout]    |
[INFO] [stdout] 93 | /// v = Vmax * [S]^n / (K0.5^n + [S]^n)
[INFO] [stdout]    |                 ^ no item named `S` in scope
[INFO] [stdout]    |
[INFO] [stdout]    = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `S`
[INFO] [stdout]   --> src/biochemistry/enzyme.rs:93:35
[INFO] [stdout]    |
[INFO] [stdout] 93 | /// v = Vmax * [S]^n / (K0.5^n + [S]^n)
[INFO] [stdout]    |                                   ^ no item named `S` in scope
[INFO] [stdout]    |
[INFO] [stdout]    = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `S`
[INFO] [stdout]    --> src/biochemistry/enzyme.rs:115:20
[INFO] [stdout]     |
[INFO] [stdout] 115 | /// v = (Vmax_f * [S]/Km_s - Vmax_r * [P]/Km_p) / (1 + [S]/Km_s + [P]/Km_p)
[INFO] [stdout]     |                    ^ no item named `S` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `P`
[INFO] [stdout]    --> src/biochemistry/enzyme.rs:115:40
[INFO] [stdout]     |
[INFO] [stdout] 115 | /// v = (Vmax_f * [S]/Km_s - Vmax_r * [P]/Km_p) / (1 + [S]/Km_s + [P]/Km_p)
[INFO] [stdout]     |                                        ^ no item named `P` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `S`
[INFO] [stdout]    --> src/biochemistry/enzyme.rs:115:57
[INFO] [stdout]     |
[INFO] [stdout] 115 | /// v = (Vmax_f * [S]/Km_s - Vmax_r * [P]/Km_p) / (1 + [S]/Km_s + [P]/Km_p)
[INFO] [stdout]     |                                                         ^ no item named `S` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `P`
[INFO] [stdout]    --> src/biochemistry/enzyme.rs:115:68
[INFO] [stdout]     |
[INFO] [stdout] 115 | /// v = (Vmax_f * [S]/Km_s - Vmax_r * [P]/Km_p) / (1 + [S]/Km_s + [P]/Km_p)
[INFO] [stdout]     |                                                                    ^ no item named `P` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `A`
[INFO] [stdout]    --> src/biochemistry/enzyme.rs:154:17
[INFO] [stdout]     |
[INFO] [stdout] 154 | /// v = Vmax * [A] * [B] / (Ki_a * Km_b + Km_b * [A] + Km_a * [B] + [A] * [B])
[INFO] [stdout]     |                 ^ no item named `A` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `B`
[INFO] [stdout]    --> src/biochemistry/enzyme.rs:154:23
[INFO] [stdout]     |
[INFO] [stdout] 154 | /// v = Vmax * [A] * [B] / (Ki_a * Km_b + Km_b * [A] + Km_a * [B] + [A] * [B])
[INFO] [stdout]     |                       ^ no item named `B` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `A`
[INFO] [stdout]    --> src/biochemistry/enzyme.rs:154:51
[INFO] [stdout]     |
[INFO] [stdout] 154 | /// v = Vmax * [A] * [B] / (Ki_a * Km_b + Km_b * [A] + Km_a * [B] + [A] * [B])
[INFO] [stdout]     |                                                   ^ no item named `A` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `B`
[INFO] [stdout]    --> src/biochemistry/enzyme.rs:154:64
[INFO] [stdout]     |
[INFO] [stdout] 154 | /// v = Vmax * [A] * [B] / (Ki_a * Km_b + Km_b * [A] + Km_a * [B] + [A] * [B])
[INFO] [stdout]     |                                                                ^ no item named `B` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `A`
[INFO] [stdout]    --> src/biochemistry/enzyme.rs:154:70
[INFO] [stdout]     |
[INFO] [stdout] 154 | /// v = Vmax * [A] * [B] / (Ki_a * Km_b + Km_b * [A] + Km_a * [B] + [A] * [B])
[INFO] [stdout]     |                                                                      ^ no item named `A` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `B`
[INFO] [stdout]    --> src/biochemistry/enzyme.rs:154:76
[INFO] [stdout]     |
[INFO] [stdout] 154 | /// v = Vmax * [A] * [B] / (Ki_a * Km_b + Km_b * [A] + Km_a * [B] + [A] * [B])
[INFO] [stdout]     |                                                                            ^ no item named `B` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `S`
[INFO] [stdout]    --> src/biochemistry/enzyme.rs:233:17
[INFO] [stdout]     |
[INFO] [stdout] 233 | /// v = Vmax * [S] / (Km * (1 + [I]/Ki) + [S])
[INFO] [stdout]     |                 ^ no item named `S` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `I`
[INFO] [stdout]    --> src/biochemistry/enzyme.rs:233:34
[INFO] [stdout]     |
[INFO] [stdout] 233 | /// v = Vmax * [S] / (Km * (1 + [I]/Ki) + [S])
[INFO] [stdout]     |                                  ^ no item named `I` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `S`
[INFO] [stdout]    --> src/biochemistry/enzyme.rs:233:44
[INFO] [stdout]     |
[INFO] [stdout] 233 | /// v = Vmax * [S] / (Km * (1 + [I]/Ki) + [S])
[INFO] [stdout]     |                                            ^ no item named `S` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `S`
[INFO] [stdout]    --> src/biochemistry/enzyme.rs:261:17
[INFO] [stdout]     |
[INFO] [stdout] 261 | /// v = Vmax * [S] / (Km + [S] + [S]*[P]/Kip)
[INFO] [stdout]     |                 ^ no item named `S` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `S`
[INFO] [stdout]    --> src/biochemistry/enzyme.rs:261:29
[INFO] [stdout]     |
[INFO] [stdout] 261 | /// v = Vmax * [S] / (Km + [S] + [S]*[P]/Kip)
[INFO] [stdout]     |                             ^ no item named `S` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `S`
[INFO] [stdout]    --> src/biochemistry/enzyme.rs:261:35
[INFO] [stdout]     |
[INFO] [stdout] 261 | /// v = Vmax * [S] / (Km + [S] + [S]*[P]/Kip)
[INFO] [stdout]     |                                   ^ no item named `S` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `P`
[INFO] [stdout]    --> src/biochemistry/enzyme.rs:261:39
[INFO] [stdout]     |
[INFO] [stdout] 261 | /// v = Vmax * [S] / (Km + [S] + [S]*[P]/Kip)
[INFO] [stdout]     |                                       ^ no item named `P` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `S`
[INFO] [stdout]    --> src/biochemistry/enzyme.rs:289:16
[INFO] [stdout]     |
[INFO] [stdout] 289 | /// v = k_f * [S] - k_r * [P]
[INFO] [stdout]     |                ^ no item named `S` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `P`
[INFO] [stdout]    --> src/biochemistry/enzyme.rs:289:28
[INFO] [stdout]     |
[INFO] [stdout] 289 | /// v = k_f * [S] - k_r * [P]
[INFO] [stdout]     |                            ^ no item named `P` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `GAP`
[INFO] [stdout]    --> src/biochemistry/glycolysis.rs:396:19
[INFO] [stdout]     |
[INFO] [stdout] 396 | /// Keq = 0.045 ([GAP]/[DHAP])
[INFO] [stdout]     |                   ^^^ no item named `GAP` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `DHAP`
[INFO] [stdout]    --> src/biochemistry/glycolysis.rs:396:25
[INFO] [stdout]     |
[INFO] [stdout] 396 | /// Keq = 0.045 ([GAP]/[DHAP])
[INFO] [stdout]     |                         ^^^^ no item named `DHAP` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `PEP`
[INFO] [stdout]    --> src/biochemistry/glycolysis.rs:659:39
[INFO] [stdout]     |
[INFO] [stdout] 659 | /// Near equilibrium, Keq ≈ 0.5 (for [PEP]/[2-PG])
[INFO] [stdout]     |                                       ^^^ no item named `PEP` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `Xu5P`
[INFO] [stdout]    --> src/biochemistry/pentose_phosphate.rs:297:43
[INFO] [stdout]     |
[INFO] [stdout] 297 | /// Reversible isomerization, Keq = 1.4 ([Xu5P]/[Ru5P])
[INFO] [stdout]     |                                           ^^^^ no item named `Xu5P` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `Ru5P`
[INFO] [stdout]    --> src/biochemistry/pentose_phosphate.rs:297:50
[INFO] [stdout]     |
[INFO] [stdout] 297 | /// Reversible isomerization, Keq = 1.4 ([Xu5P]/[Ru5P])
[INFO] [stdout]     |                                                  ^^^^ no item named `Ru5P` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `R5P`
[INFO] [stdout]    --> src/biochemistry/pentose_phosphate.rs:360:43
[INFO] [stdout]     |
[INFO] [stdout] 360 | /// Reversible isomerization, Keq = 3.0 ([R5P]/[Ru5P])
[INFO] [stdout]     |                                           ^^^ no item named `R5P` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `Ru5P`
[INFO] [stdout]    --> src/biochemistry/pentose_phosphate.rs:360:49
[INFO] [stdout]     |
[INFO] [stdout] 360 | /// Reversible isomerization, Keq = 3.0 ([R5P]/[Ru5P])
[INFO] [stdout]     |                                                 ^^^^ no item named `Ru5P` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 1m 03s
[INFO] [stderr]    Generated /opt/rustwide/target/doc/cell_simulator_x/index.html
[INFO] running `Command { std: "docker" "inspect" "56b6cce4ffd36a069a3061e21e70960fa916d782d8da443dd82aa3f590cb7aa8", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "DOCS_RS=1" "-e" "RUSTC_BOOTSTRAP=1" "-w" "/opt/rustwide/workdir" "--user" "0:0" "56b6cce4ffd36a069a3061e21e70960fa916d782d8da443dd82aa3f590cb7aa8" "/opt/rustwide/cargo-home/bin/cargo" "+1.97.0-beta.6" "rustdoc" "--lib" "-Zrustdoc-map" "--config" "build.rustdocflags=[\"--cfg\", \"docsrs\", \"-Z\", \"unstable-options\", \"--document-private-items\"]" "--frozen" "--message-format=json", kill_on_drop: false }`
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[INFO] [stdout] warning: unresolved link to `S`
[INFO] [stdout]   --> src/biochemistry/enzyme.rs:74:17
[INFO] [stdout]    |
[INFO] [stdout] 74 | /// v = Vmax * [S] / (Km + [S])
[INFO] [stdout]    |                 ^ no item named `S` in scope
[INFO] [stdout]    |
[INFO] [stdout]    = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout]    = note: `#[warn(rustdoc::broken_intra_doc_links)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `S`
[INFO] [stdout]   --> src/biochemistry/enzyme.rs:74:29
[INFO] [stdout]    |
[INFO] [stdout] 74 | /// v = Vmax * [S] / (Km + [S])
[INFO] [stdout]    |                             ^ no item named `S` in scope
[INFO] [stdout]    |
[INFO] [stdout]    = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `S`
[INFO] [stdout]   --> src/biochemistry/enzyme.rs:93:17
[INFO] [stdout]    |
[INFO] [stdout] 93 | /// v = Vmax * [S]^n / (K0.5^n + [S]^n)
[INFO] [stdout]    |                 ^ no item named `S` in scope
[INFO] [stdout]    |
[INFO] [stdout]    = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `S`
[INFO] [stdout]   --> src/biochemistry/enzyme.rs:93:35
[INFO] [stdout]    |
[INFO] [stdout] 93 | /// v = Vmax * [S]^n / (K0.5^n + [S]^n)
[INFO] [stdout]    |                                   ^ no item named `S` in scope
[INFO] [stdout]    |
[INFO] [stdout]    = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `S`
[INFO] [stdout]    --> src/biochemistry/enzyme.rs:115:20
[INFO] [stdout]     |
[INFO] [stdout] 115 | /// v = (Vmax_f * [S]/Km_s - Vmax_r * [P]/Km_p) / (1 + [S]/Km_s + [P]/Km_p)
[INFO] [stdout]     |                    ^ no item named `S` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `P`
[INFO] [stdout]    --> src/biochemistry/enzyme.rs:115:40
[INFO] [stdout]     |
[INFO] [stdout] 115 | /// v = (Vmax_f * [S]/Km_s - Vmax_r * [P]/Km_p) / (1 + [S]/Km_s + [P]/Km_p)
[INFO] [stdout]     |                                        ^ no item named `P` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `S`
[INFO] [stdout]    --> src/biochemistry/enzyme.rs:115:57
[INFO] [stdout]     |
[INFO] [stdout] 115 | /// v = (Vmax_f * [S]/Km_s - Vmax_r * [P]/Km_p) / (1 + [S]/Km_s + [P]/Km_p)
[INFO] [stdout]     |                                                         ^ no item named `S` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `P`
[INFO] [stdout]    --> src/biochemistry/enzyme.rs:115:68
[INFO] [stdout]     |
[INFO] [stdout] 115 | /// v = (Vmax_f * [S]/Km_s - Vmax_r * [P]/Km_p) / (1 + [S]/Km_s + [P]/Km_p)
[INFO] [stdout]     |                                                                    ^ no item named `P` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `A`
[INFO] [stdout]    --> src/biochemistry/enzyme.rs:154:17
[INFO] [stdout]     |
[INFO] [stdout] 154 | /// v = Vmax * [A] * [B] / (Ki_a * Km_b + Km_b * [A] + Km_a * [B] + [A] * [B])
[INFO] [stdout]     |                 ^ no item named `A` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `B`
[INFO] [stdout]    --> src/biochemistry/enzyme.rs:154:23
[INFO] [stdout]     |
[INFO] [stdout] 154 | /// v = Vmax * [A] * [B] / (Ki_a * Km_b + Km_b * [A] + Km_a * [B] + [A] * [B])
[INFO] [stdout]     |                       ^ no item named `B` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `A`
[INFO] [stdout]    --> src/biochemistry/enzyme.rs:154:51
[INFO] [stdout]     |
[INFO] [stdout] 154 | /// v = Vmax * [A] * [B] / (Ki_a * Km_b + Km_b * [A] + Km_a * [B] + [A] * [B])
[INFO] [stdout]     |                                                   ^ no item named `A` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `B`
[INFO] [stdout]    --> src/biochemistry/enzyme.rs:154:64
[INFO] [stdout]     |
[INFO] [stdout] 154 | /// v = Vmax * [A] * [B] / (Ki_a * Km_b + Km_b * [A] + Km_a * [B] + [A] * [B])
[INFO] [stdout]     |                                                                ^ no item named `B` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `A`
[INFO] [stdout]    --> src/biochemistry/enzyme.rs:154:70
[INFO] [stdout]     |
[INFO] [stdout] 154 | /// v = Vmax * [A] * [B] / (Ki_a * Km_b + Km_b * [A] + Km_a * [B] + [A] * [B])
[INFO] [stdout]     |                                                                      ^ no item named `A` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `B`
[INFO] [stdout]    --> src/biochemistry/enzyme.rs:154:76
[INFO] [stdout]     |
[INFO] [stdout] 154 | /// v = Vmax * [A] * [B] / (Ki_a * Km_b + Km_b * [A] + Km_a * [B] + [A] * [B])
[INFO] [stdout]     |                                                                            ^ no item named `B` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `S`
[INFO] [stdout]    --> src/biochemistry/enzyme.rs:233:17
[INFO] [stdout]     |
[INFO] [stdout] 233 | /// v = Vmax * [S] / (Km * (1 + [I]/Ki) + [S])
[INFO] [stdout]     |                 ^ no item named `S` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `I`
[INFO] [stdout]    --> src/biochemistry/enzyme.rs:233:34
[INFO] [stdout]     |
[INFO] [stdout] 233 | /// v = Vmax * [S] / (Km * (1 + [I]/Ki) + [S])
[INFO] [stdout]     |                                  ^ no item named `I` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `S`
[INFO] [stdout]    --> src/biochemistry/enzyme.rs:233:44
[INFO] [stdout]     |
[INFO] [stdout] 233 | /// v = Vmax * [S] / (Km * (1 + [I]/Ki) + [S])
[INFO] [stdout]     |                                            ^ no item named `S` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `S`
[INFO] [stdout]    --> src/biochemistry/enzyme.rs:261:17
[INFO] [stdout]     |
[INFO] [stdout] 261 | /// v = Vmax * [S] / (Km + [S] + [S]*[P]/Kip)
[INFO] [stdout]     |                 ^ no item named `S` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `S`
[INFO] [stdout]    --> src/biochemistry/enzyme.rs:261:29
[INFO] [stdout]     |
[INFO] [stdout] 261 | /// v = Vmax * [S] / (Km + [S] + [S]*[P]/Kip)
[INFO] [stdout]     |                             ^ no item named `S` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `S`
[INFO] [stdout]    --> src/biochemistry/enzyme.rs:261:35
[INFO] [stdout]     |
[INFO] [stdout] 261 | /// v = Vmax * [S] / (Km + [S] + [S]*[P]/Kip)
[INFO] [stdout]     |                                   ^ no item named `S` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `P`
[INFO] [stdout]    --> src/biochemistry/enzyme.rs:261:39
[INFO] [stdout]     |
[INFO] [stdout] 261 | /// v = Vmax * [S] / (Km + [S] + [S]*[P]/Kip)
[INFO] [stdout]     |                                       ^ no item named `P` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `S`
[INFO] [stdout]    --> src/biochemistry/enzyme.rs:289:16
[INFO] [stdout]     |
[INFO] [stdout] 289 | /// v = k_f * [S] - k_r * [P]
[INFO] [stdout]     |                ^ no item named `S` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `P`
[INFO] [stdout]    --> src/biochemistry/enzyme.rs:289:28
[INFO] [stdout]     |
[INFO] [stdout] 289 | /// v = k_f * [S] - k_r * [P]
[INFO] [stdout]     |                            ^ no item named `P` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `GAP`
[INFO] [stdout]    --> src/biochemistry/glycolysis.rs:396:19
[INFO] [stdout]     |
[INFO] [stdout] 396 | /// Keq = 0.045 ([GAP]/[DHAP])
[INFO] [stdout]     |                   ^^^ no item named `GAP` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `DHAP`
[INFO] [stdout]    --> src/biochemistry/glycolysis.rs:396:25
[INFO] [stdout]     |
[INFO] [stdout] 396 | /// Keq = 0.045 ([GAP]/[DHAP])
[INFO] [stdout]     |                         ^^^^ no item named `DHAP` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `PEP`
[INFO] [stdout]    --> src/biochemistry/glycolysis.rs:659:39
[INFO] [stdout]     |
[INFO] [stdout] 659 | /// Near equilibrium, Keq ≈ 0.5 (for [PEP]/[2-PG])
[INFO] [stdout]     |                                       ^^^ no item named `PEP` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `Xu5P`
[INFO] [stdout]    --> src/biochemistry/pentose_phosphate.rs:297:43
[INFO] [stdout]     |
[INFO] [stdout] 297 | /// Reversible isomerization, Keq = 1.4 ([Xu5P]/[Ru5P])
[INFO] [stdout]     |                                           ^^^^ no item named `Xu5P` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `Ru5P`
[INFO] [stdout]    --> src/biochemistry/pentose_phosphate.rs:297:50
[INFO] [stdout]     |
[INFO] [stdout] 297 | /// Reversible isomerization, Keq = 1.4 ([Xu5P]/[Ru5P])
[INFO] [stdout]     |                                                  ^^^^ no item named `Ru5P` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `R5P`
[INFO] [stdout]    --> src/biochemistry/pentose_phosphate.rs:360:43
[INFO] [stdout]     |
[INFO] [stdout] 360 | /// Reversible isomerization, Keq = 3.0 ([R5P]/[Ru5P])
[INFO] [stdout]     |                                           ^^^ no item named `R5P` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `Ru5P`
[INFO] [stdout]    --> src/biochemistry/pentose_phosphate.rs:360:49
[INFO] [stdout]     |
[INFO] [stdout] 360 | /// Reversible isomerization, Keq = 3.0 ([R5P]/[Ru5P])
[INFO] [stdout]     |                                                 ^^^^ no item named `Ru5P` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 51.82s
[INFO] [stderr]    Generated /opt/rustwide/target/doc/cell_simulator_x/index.html
[INFO] running `Command { std: "docker" "inspect" "56b6cce4ffd36a069a3061e21e70960fa916d782d8da443dd82aa3f590cb7aa8", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "56b6cce4ffd36a069a3061e21e70960fa916d782d8da443dd82aa3f590cb7aa8", kill_on_drop: false }`
[INFO] [stdout] 56b6cce4ffd36a069a3061e21e70960fa916d782d8da443dd82aa3f590cb7aa8
