[INFO] cloning repository https://github.com/lcerdeira/dragon
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/lcerdeira/dragon" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Flcerdeira%2Fdragon", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Flcerdeira%2Fdragon'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] eaba16b8dd3691667a43589993ce999d89198393
[INFO] documenting lcerdeira/dragon against 1.97.0-beta.6 for beta-rustdoc-1.98-1
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Flcerdeira%2Fdragon" "/workspace/builds/worker-0-tc1/source", kill_on_drop: false }`
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[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/lcerdeira/dragon
[INFO] finished tweaking git repo https://github.com/lcerdeira/dragon
[INFO] tweaked toml for git repo https://github.com/lcerdeira/dragon written to /workspace/builds/worker-0-tc1/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/lcerdeira/dragon on toolchain 1.97.0-beta.6
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.97.0-beta.6" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/lcerdeira/dragon already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.97.0-beta.6" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
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[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:3d5ced03c013a94a2f102a4510f48a6e9184255caf5fd8244f58017bde7f5210" "sleep" "infinity", kill_on_drop: false }`
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[INFO] running `Command { std: "docker" "inspect" "fe6a9fc7a36c2242bfdb372bd1fe826a64e5a3aa3eace121946526664258eceb", kill_on_drop: false }`
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[INFO] [stderr]     Checking bio v2.3.0
[INFO] [stderr]  Documenting dragon v0.1.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Checking dragon v0.1.0 (/opt/rustwide/workdir)
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/index/fm.rs:206:33
[INFO] [stdout]     |
[INFO] [stdout] 206 | fn eytzinger_node_to_sorted_idx(mut k: usize, n: usize) -> usize {
[INFO] [stdout]     |                                 ----^
[INFO] [stdout]     |                                 |
[INFO] [stdout]     |                                 help: remove this `mut`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_mut)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: field `color_offsets_len` is never read
[INFO] [stdout]   --> src/index/zarr_http.rs:67:5
[INFO] [stdout]    |
[INFO] [stdout] 50 | pub struct HttpZarrIndex {
[INFO] [stdout]    |            ------------- field in this struct
[INFO] [stdout] ...
[INFO] [stdout] 67 |     color_offsets_len: u64,
[INFO] [stdout]    |     ^^^^^^^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: field `shape` is never read
[INFO] [stdout]   --> src/index/zarr_http.rs:97:5
[INFO] [stdout]    |
[INFO] [stdout] 96 | struct ZarrArrayMeta {
[INFO] [stdout]    |        ------------- field in this struct
[INFO] [stdout] 97 |     shape: Vec<u64>,
[INFO] [stdout]    |     ^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `ZarrArrayMeta` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `i`
[INFO] [stdout]   --> src/ds/elias_fano.rs:13:49
[INFO] [stdout]    |
[INFO] [stdout] 13 |     /// Cumulative start positions: cum_lengths[i] = start position of unitig i.
[INFO] [stdout]    |                                                 ^ no item named `i` in scope
[INFO] [stdout]    |
[INFO] [stdout]    = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout]    = note: `#[warn(rustdoc::broken_intra_doc_links)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `num_unitigs`
[INFO] [stdout]   --> src/ds/elias_fano.rs:14:21
[INFO] [stdout]    |
[INFO] [stdout] 14 |     /// cum_lengths[num_unitigs] = total text length.
[INFO] [stdout]    |                     ^^^^^^^^^^^ no item named `num_unitigs` in scope
[INFO] [stdout]    |
[INFO] [stdout]    = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `0`
[INFO] [stdout]   --> src/index/paths_v4.rs:64:30
[INFO] [stdout]    |
[INFO] [stdout] 64 | //! By convention checkpoint[0] is always step 0 (the genome's first step,
[INFO] [stdout]    |                              ^ no item named `0` in scope
[INFO] [stdout]    |
[INFO] [stdout]    = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `iter_window`
[INFO] [stdout]    --> src/index/paths_v4.rs:487:21
[INFO] [stdout]     |
[INFO] [stdout] 487 |     /// paths use [`iter_window`].
[INFO] [stdout]     |                     ^^^^^^^^^^^ no item named `iter_window` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `find_unitig_steps`
[INFO] [stdout]    --> src/index/paths_v4.rs:554:11
[INFO] [stdout]     |
[INFO] [stdout] 554 |     /// [`find_unitig_steps`] + [`iter_window`] and only needs metadata.
[INFO] [stdout]     |           ^^^^^^^^^^^^^^^^^ no item named `find_unitig_steps` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `iter_window`
[INFO] [stdout]    --> src/index/paths_v4.rs:554:35
[INFO] [stdout]     |
[INFO] [stdout] 554 |     /// [`find_unitig_steps`] + [`iter_window`] and only needs metadata.
[INFO] [stdout]     |                                   ^^^^^^^^^^^ no item named `iter_window` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `walk_genome`
[INFO] [stdout]    --> src/index/paths_v4.rs:581:20
[INFO] [stdout]     |
[INFO] [stdout] 581 |     /// and (via [`walk_genome`]) `find_unitig_steps`. Returns
[INFO] [stdout]     |                    ^^^^^^^^^^^ no item named `walk_genome` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `0`
[INFO] [stdout]    --> src/index/zarr_backend.rs:285:45
[INFO] [stdout]     |
[INFO] [stdout] 285 | /// table verbatim (rebased so that offsets[0] == 0) and stream the
[INFO] [stdout]     |                                             ^ no item named `0` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unclosed HTML tag `TAB`
[INFO] [stdout]   --> src/signal/io.rs:57:14
[INFO] [stdout]    |
[INFO] [stdout] 57 | ///   read_id<TAB>value1<TAB>value2<TAB>...
[INFO] [stdout]    |              ^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(rustdoc::invalid_html_tags)]` on by default
[INFO] [stdout] help: try marking as source code
[INFO] [stdout]    |
[INFO] [stdout] 57 | ///   `read_id<TAB>`value1<TAB>value2<TAB>...
[INFO] [stdout]    |       +            +
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unclosed HTML tag `TAB`
[INFO] [stdout]   --> src/signal/io.rs:57:25
[INFO] [stdout]    |
[INFO] [stdout] 57 | ///   read_id<TAB>value1<TAB>value2<TAB>...
[INFO] [stdout]    |                         ^^^^^
[INFO] [stdout]    |
[INFO] [stdout] help: try marking as source code
[INFO] [stdout]    |
[INFO] [stdout] 57 | ///   read_id<TAB>`value1<TAB>`value2<TAB>...
[INFO] [stdout]    |                   +           +
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unclosed HTML tag `TAB`
[INFO] [stdout]   --> src/signal/io.rs:57:36
[INFO] [stdout]    |
[INFO] [stdout] 57 | ///   read_id<TAB>value1<TAB>value2<TAB>...
[INFO] [stdout]    |                                    ^^^^^
[INFO] [stdout]    |
[INFO] [stdout] help: try marking as source code
[INFO] [stdout]    |
[INFO] [stdout] 57 | ///   read_id<TAB>value1<TAB>`value2<TAB>`...
[INFO] [stdout]    |                              +           +
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unclosed HTML tag `TAB`
[INFO] [stdout]    --> src/signal/io.rs:155:24
[INFO] [stdout]     |
[INFO] [stdout] 155 | /// Data lines: read_id<TAB>...fields...<TAB>raw_signal(comma-separated integers)
[INFO] [stdout]     |                        ^^^^^
[INFO] [stdout]     |
[INFO] [stdout] help: try marking as source code
[INFO] [stdout]     |
[INFO] [stdout] 155 | /// Data lines: `read_id<TAB>`...fields...<TAB>raw_signal(comma-separated integers)
[INFO] [stdout]     |                 +            +
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unclosed HTML tag `TAB`
[INFO] [stdout]    --> src/signal/io.rs:155:41
[INFO] [stdout]     |
[INFO] [stdout] 155 | /// Data lines: read_id<TAB>...fields...<TAB>raw_signal(comma-separated integers)
[INFO] [stdout]     |                                         ^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 1m 37s
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[INFO] running `Command { std: "docker" "inspect" "fe6a9fc7a36c2242bfdb372bd1fe826a64e5a3aa3eace121946526664258eceb", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "DOCS_RS=1" "-e" "RUSTC_BOOTSTRAP=1" "-w" "/opt/rustwide/workdir" "--user" "0:0" "fe6a9fc7a36c2242bfdb372bd1fe826a64e5a3aa3eace121946526664258eceb" "/opt/rustwide/cargo-home/bin/cargo" "+1.97.0-beta.6" "rustdoc" "--lib" "-Zrustdoc-map" "--config" "build.rustdocflags=[\"--cfg\", \"docsrs\", \"-Z\", \"unstable-options\", \"--document-private-items\"]" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.106
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[INFO] [stderr]    Compiling strum_macros v0.26.4
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[INFO] [stderr]  Documenting dragon v0.1.0 (/opt/rustwide/workdir)
[INFO] [stdout] warning: unresolved link to `0`
[INFO] [stdout]   --> src/index/paths_v4.rs:64:30
[INFO] [stdout]    |
[INFO] [stdout] 64 | //! By convention checkpoint[0] is always step 0 (the genome's first step,
[INFO] [stdout]    |                              ^ no item named `0` in scope
[INFO] [stdout]    |
[INFO] [stdout]    = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout]    = note: `#[warn(rustdoc::broken_intra_doc_links)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `iter_window`
[INFO] [stdout]    --> src/index/paths_v4.rs:487:21
[INFO] [stdout]     |
[INFO] [stdout] 487 |     /// paths use [`iter_window`].
[INFO] [stdout]     |                     ^^^^^^^^^^^ no item named `iter_window` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `find_unitig_steps`
[INFO] [stdout]    --> src/index/paths_v4.rs:554:11
[INFO] [stdout]     |
[INFO] [stdout] 554 |     /// [`find_unitig_steps`] + [`iter_window`] and only needs metadata.
[INFO] [stdout]     |           ^^^^^^^^^^^^^^^^^ no item named `find_unitig_steps` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unresolved link to `iter_window`
[INFO] [stdout]    --> src/index/paths_v4.rs:554:35
[INFO] [stdout]     |
[INFO] [stdout] 554 |     /// [`find_unitig_steps`] + [`iter_window`] and only needs metadata.
[INFO] [stdout]     |                                   ^^^^^^^^^^^ no item named `iter_window` in scope
[INFO] [stdout]     |
[INFO] [stdout]     = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unclosed HTML tag `TAB`
[INFO] [stdout]   --> src/signal/io.rs:57:14
[INFO] [stdout]    |
[INFO] [stdout] 57 | ///   read_id<TAB>value1<TAB>value2<TAB>...
[INFO] [stdout]    |              ^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(rustdoc::invalid_html_tags)]` on by default
[INFO] [stdout] help: try marking as source code
[INFO] [stdout]    |
[INFO] [stdout] 57 | ///   `read_id<TAB>`value1<TAB>value2<TAB>...
[INFO] [stdout]    |       +            +
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unclosed HTML tag `TAB`
[INFO] [stdout]   --> src/signal/io.rs:57:25
[INFO] [stdout]    |
[INFO] [stdout] 57 | ///   read_id<TAB>value1<TAB>value2<TAB>...
[INFO] [stdout]    |                         ^^^^^
[INFO] [stdout]    |
[INFO] [stdout] help: try marking as source code
[INFO] [stdout]    |
[INFO] [stdout] 57 | ///   read_id<TAB>`value1<TAB>`value2<TAB>...
[INFO] [stdout]    |                   +           +
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unclosed HTML tag `TAB`
[INFO] [stdout]   --> src/signal/io.rs:57:36
[INFO] [stdout]    |
[INFO] [stdout] 57 | ///   read_id<TAB>value1<TAB>value2<TAB>...
[INFO] [stdout]    |                                    ^^^^^
[INFO] [stdout]    |
[INFO] [stdout] help: try marking as source code
[INFO] [stdout]    |
[INFO] [stdout] 57 | ///   read_id<TAB>value1<TAB>`value2<TAB>`...
[INFO] [stdout]    |                              +           +
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unclosed HTML tag `TAB`
[INFO] [stdout]    --> src/signal/io.rs:155:24
[INFO] [stdout]     |
[INFO] [stdout] 155 | /// Data lines: read_id<TAB>...fields...<TAB>raw_signal(comma-separated integers)
[INFO] [stdout]     |                        ^^^^^
[INFO] [stdout]     |
[INFO] [stdout] help: try marking as source code
[INFO] [stdout]     |
[INFO] [stdout] 155 | /// Data lines: `read_id<TAB>`...fields...<TAB>raw_signal(comma-separated integers)
[INFO] [stdout]     |                 +            +
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unclosed HTML tag `TAB`
[INFO] [stdout]    --> src/signal/io.rs:155:41
[INFO] [stdout]     |
[INFO] [stdout] 155 | /// Data lines: read_id<TAB>...fields...<TAB>raw_signal(comma-separated integers)
[INFO] [stdout]     |                                         ^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 58.14s
[INFO] [stderr]    Generated /opt/rustwide/target/doc/dragon/index.html
[INFO] running `Command { std: "docker" "inspect" "fe6a9fc7a36c2242bfdb372bd1fe826a64e5a3aa3eace121946526664258eceb", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "fe6a9fc7a36c2242bfdb372bd1fe826a64e5a3aa3eace121946526664258eceb", kill_on_drop: false }`
[INFO] [stdout] fe6a9fc7a36c2242bfdb372bd1fe826a64e5a3aa3eace121946526664258eceb
