[INFO] fetching crate bamcalib 0.1.5... [INFO] documenting bamcalib-0.1.5 against beta-2024-12-08 for beta-rustdoc-1.84.0-4-retry [INFO] extracting crate bamcalib 0.1.5 into /workspace/builds/worker-2-tc2/source [INFO] validating manifest of crates.io crate bamcalib 0.1.5 on toolchain beta-2024-12-08 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2024-12-08" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate bamcalib 0.1.5 [INFO] finished tweaking crates.io crate bamcalib 0.1.5 [INFO] tweaked toml for crates.io crate bamcalib 0.1.5 written to /workspace/builds/worker-2-tc2/source/Cargo.toml [INFO] crate crates.io crate bamcalib 0.1.5 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2024-12-08" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:f3a9d4ad9d972b27faf3965f35b62e55ba32bbce8f20bc8fe909558a86702fde" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2024-12-08" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] a6541ff7810eb7b1328e9a6b0c64197e39ec95e5e02819680560f67e36eeec5f [INFO] running `Command { std: "docker" "start" "-a" "a6541ff7810eb7b1328e9a6b0c64197e39ec95e5e02819680560f67e36eeec5f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "a6541ff7810eb7b1328e9a6b0c64197e39ec95e5e02819680560f67e36eeec5f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "a6541ff7810eb7b1328e9a6b0c64197e39ec95e5e02819680560f67e36eeec5f", kill_on_drop: false }` [INFO] [stdout] a6541ff7810eb7b1328e9a6b0c64197e39ec95e5e02819680560f67e36eeec5f [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:f3a9d4ad9d972b27faf3965f35b62e55ba32bbce8f20bc8fe909558a86702fde" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2024-12-08" "doc" "--frozen" "--no-deps" "--document-private-items" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] bb70e0ca92e31512ecd4c8bf920dbae21f3e27893eae6805d3796f1bfcfb2a4c [INFO] running `Command { std: "docker" "start" "-a" "bb70e0ca92e31512ecd4c8bf920dbae21f3e27893eae6805d3796f1bfcfb2a4c", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.137 [INFO] [stderr] Compiling proc-macro2 v1.0.47 [INFO] [stderr] Compiling quote v1.0.21 [INFO] [stderr] Compiling unicode-ident v1.0.5 [INFO] [stderr] Compiling syn v1.0.103 [INFO] [stderr] Compiling cc v1.0.76 [INFO] [stderr] Compiling libm v0.2.6 [INFO] [stderr] Compiling num-traits v0.2.15 [INFO] [stderr] Compiling pkg-config v0.3.26 [INFO] [stderr] Compiling futures-core v0.3.25 [INFO] [stderr] Compiling slab v0.4.7 [INFO] [stderr] Checking tinyvec_macros v0.1.0 [INFO] [stderr] Compiling futures-channel v0.3.25 [INFO] [stderr] Compiling futures-task v0.3.25 [INFO] [stderr] Compiling proc-macro-error-attr v1.0.4 [INFO] [stderr] Compiling num-integer v0.1.45 [INFO] [stderr] Checking tinyvec v1.6.0 [INFO] [stderr] Compiling serde_derive v1.0.147 [INFO] [stderr] Compiling io-lifetimes v1.0.4 [INFO] [stderr] Compiling futures-util v0.3.25 [INFO] [stderr] Compiling log v0.4.17 [INFO] [stderr] Compiling paste v1.0.11 [INFO] [stderr] Checking once_cell v1.16.0 [INFO] [stderr] Compiling openssl v0.10.44 [INFO] [stderr] Checking futures-sink v0.3.25 [INFO] [stderr] Checking bytemuck v1.13.0 [INFO] [stderr] Checking os_str_bytes v6.4.1 [INFO] [stderr] Checking miniz_oxide v0.6.2 [INFO] [stderr] Compiling proc-macro-error v1.0.4 [INFO] [stderr] Checking safe_arch v0.6.0 [INFO] [stderr] Compiling lock_api v0.4.9 [INFO] [stderr] Compiling indexmap v1.9.2 [INFO] [stderr] Compiling num-rational v0.4.1 [INFO] [stderr] Compiling serde v1.0.147 [INFO] [stderr] Checking pin-project-lite v0.2.9 [INFO] [stderr] Checking unicode-bidi v0.3.8 [INFO] [stderr] Compiling crossbeam-utils v0.8.14 [INFO] [stderr] Compiling parking_lot_core v0.8.5 [INFO] [stderr] Checking unicode-normalization v0.1.22 [INFO] [stderr] Checking percent-encoding v2.2.0 [INFO] [stderr] Compiling rustix v0.36.7 [INFO] [stderr] Checking futures-io v0.3.25 [INFO] [stderr] Checking wide v0.7.6 [INFO] [stderr] Checking form_urlencoded v1.1.0 [INFO] [stderr] Checking flate2 v1.0.25 [INFO] [stderr] Compiling openssl-sys v0.9.79 [INFO] [stderr] Compiling libdeflate-sys v0.7.5 [INFO] [stderr] Checking instant v0.1.12 [INFO] [stderr] Checking linux-raw-sys v0.1.4 [INFO] [stderr] Checking byteorder v1.4.3 [INFO] [stderr] Checking scopeguard v1.1.0 [INFO] [stderr] Checking smallvec v1.10.0 [INFO] [stderr] Checking hashbrown v0.12.3 [INFO] [stderr] Checking rawpointer v0.2.1 [INFO] [stderr] Checking idna v0.3.0 [INFO] [stderr] Checking itoa v1.0.4 [INFO] [stderr] Checking bytes v1.3.0 [INFO] [stderr] Checking matrixmultiply v0.3.2 [INFO] [stderr] Checking approx v0.5.1 [INFO] [stderr] Checking num-complex v0.4.3 [INFO] [stderr] Checking clap_lex v0.2.4 [INFO] [stderr] Checking either v1.8.0 [INFO] [stderr] Compiling native-tls v0.2.11 [INFO] [stderr] Checking remove_dir_all v0.5.3 [INFO] [stderr] Compiling heck v0.4.0 [INFO] [stderr] Checking fastrand v1.8.0 [INFO] [stderr] Checking textwrap v0.16.0 [INFO] [stderr] Checking url v2.3.1 [INFO] [stderr] Checking wildmatch v2.1.1 [INFO] [stderr] Checking byteordered v0.6.0 [INFO] [stderr] Checking crossbeam-channel v0.5.6 [INFO] [stderr] Checking clap_lex v0.3.1 [INFO] [stderr] Checking lazy_static v1.4.0 [INFO] [stderr] Checking itertools v0.10.5 [INFO] [stderr] Checking bam v0.1.4 [INFO] [stderr] Checking http v0.2.8 [INFO] [stderr] Checking getrandom v0.2.8 [INFO] [stderr] Checking num_cpus v1.14.0 [INFO] [stderr] Checking atty v0.2.14 [INFO] [stderr] Checking tempfile v3.3.0 [INFO] [stderr] Checking simba v0.6.0 [INFO] [stderr] Checking rand_core v0.6.4 [INFO] [stderr] Checking parking_lot v0.11.2 [INFO] [stderr] Checking rand_chacha v0.3.1 [INFO] [stderr] Checking rand v0.8.5 [INFO] [stderr] Checking libdeflater v0.7.5 [INFO] [stderr] Checking clap v3.2.23 [INFO] [stderr] Checking rand_distr v0.4.3 [INFO] [stderr] Checking is-terminal v0.4.2 [INFO] [stderr] Compiling futures-macro v0.3.25 [INFO] [stderr] Compiling openssl-macros v0.1.0 [INFO] [stderr] Compiling nalgebra-macros v0.1.0 [INFO] [stderr] Compiling clap_derive v4.1.0 [INFO] [stderr] Checking clap v4.1.1 [INFO] [stderr] Checking nalgebra v0.29.0 [INFO] [stderr] Checking attohttpc v0.18.0 [INFO] [stderr] Checking futures-executor v0.3.25 [INFO] [stderr] Checking futures v0.3.25 [INFO] [stderr] Checking bincode v1.3.3 [INFO] [stderr] Checking bigtools v0.1.11 [INFO] [stderr] Checking statrs v0.16.0 [INFO] [stderr] Documenting bamcalib v0.1.5 (/opt/rustwide/workdir) [INFO] [stdout] warning: unclosed HTML tag `File` [INFO] [stdout] --> src/multimapping.rs:62:35 [INFO] [stdout] | [INFO] [stdout] 62 | /// - bam: &mut bam::BamReader [INFO] [stdout] | ^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(rustdoc::invalid_html_tags)]` on by default [INFO] [stdout] help: try marking as source code [INFO] [stdout] | [INFO] [stdout] 62 | /// - bam: &mut `bam::BamReader` [INFO] [stdout] | + + [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unclosed HTML tag `File` [INFO] [stdout] --> src/pileup.rs:44:38 [INFO] [stdout] | [INFO] [stdout] 44 | /// - bam: &'a mut bam::BamReader [INFO] [stdout] | ^^^^^^ [INFO] [stdout] | [INFO] [stdout] help: try marking as source code [INFO] [stdout] | [INFO] [stdout] 44 | /// - bam: &'a mut `bam::BamReader` [INFO] [stdout] | + + [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unclosed HTML tag `u32` [INFO] [stdout] --> src/pileup.rs:269:19 [INFO] [stdout] | [INFO] [stdout] 269 | /// - depth: Vec:: of size the reference genome [INFO] [stdout] | ^^^^^ [INFO] [stdout] | [INFO] [stdout] help: try marking as source code [INFO] [stdout] | [INFO] [stdout] 269 | /// - depth: `Vec::` of size the reference genome [INFO] [stdout] | + + [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unclosed HTML tag `File` [INFO] [stdout] --> src/utils.rs:15:19 [INFO] [stdout] | [INFO] [stdout] 15 | /// bam::BamReader [INFO] [stdout] | ^^^^^^ [INFO] [stdout] | [INFO] [stdout] help: try marking as source code [INFO] [stdout] | [INFO] [stdout] 15 | /// `bam::BamReader` [INFO] [stdout] | + + [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unclosed HTML tag `File` [INFO] [stdout] --> src/utils.rs:63:35 [INFO] [stdout] | [INFO] [stdout] 63 | /// - bam: &mut bam::BamReader [INFO] [stdout] | ^^^^^^ [INFO] [stdout] | [INFO] [stdout] help: try marking as source code [INFO] [stdout] | [INFO] [stdout] 63 | /// - bam: &mut `bam::BamReader` [INFO] [stdout] | + + [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unclosed HTML tag `u32` [INFO] [stdout] --> src/utils.rs:121:13 [INFO] [stdout] | [INFO] [stdout] 121 | /// &Vec the chromosome lengths [INFO] [stdout] | ^^^^^ [INFO] [stdout] | [INFO] [stdout] help: try marking as source code [INFO] [stdout] | [INFO] [stdout] 121 | /// &`Vec` the chromosome lengths [INFO] [stdout] | + + [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 24.73s [INFO] [stderr] Generated /opt/rustwide/target/doc/bamcalib/index.html [INFO] running `Command { std: "docker" "inspect" "bb70e0ca92e31512ecd4c8bf920dbae21f3e27893eae6805d3796f1bfcfb2a4c", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "bb70e0ca92e31512ecd4c8bf920dbae21f3e27893eae6805d3796f1bfcfb2a4c", kill_on_drop: false }` [INFO] [stdout] bb70e0ca92e31512ecd4c8bf920dbae21f3e27893eae6805d3796f1bfcfb2a4c