[INFO] fetching crate extended-htslib 0.4.3... [INFO] documenting extended-htslib-0.4.3 against 1.99.0-beta.8 for beta-rustdoc-1.100-2 [INFO] extracting crate extended-htslib 0.4.3 into /workspace/builds/worker-2-tc1/source [INFO] started tweaking crates.io crate extended-htslib 0.4.3 [INFO] finished tweaking crates.io crate extended-htslib 0.4.3 [INFO] tweaked toml for crates.io crate extended-htslib 0.4.3 written to /workspace/builds/worker-2-tc1/source/Cargo.toml [INFO] validating manifest of crates.io crate extended-htslib 0.4.3 on toolchain 1.99.0-beta.8 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.99.0-beta.8" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate extended-htslib 0.4.3 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.99.0-beta.8" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded rustc_version v0.1.7 [INFO] [stderr] Downloaded ieee754 v0.2.6 [INFO] [stderr] Downloaded linear-map v1.2.0 [INFO] [stderr] Downloaded semver v0.1.20 [INFO] [stderr] Downloaded newtype_derive v0.1.6 [INFO] [stderr] Downloaded fs-utils v1.1.4 [INFO] [stderr] Downloaded custom_derive v0.1.7 [INFO] [stderr] Downloaded libdeflate-sys v1.25.2 [INFO] [stderr] Downloaded bio-types v1.0.4 [INFO] [stderr] Downloaded hts-sys v2.2.1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:77db811e55d90add9212f6832c23229e3de5f1c1f9905e8cb07319ea15df73ac" "sleep" "infinity", kill_on_drop: false }` [INFO] [stdout] fbce20acf44a8350627c4b94a868e2c9b75bacef057c45471c261c9a88832951 [INFO] running `Command { std: "docker" "start" "fbce20acf44a8350627c4b94a868e2c9b75bacef057c45471c261c9a88832951", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "fbce20acf44a8350627c4b94a868e2c9b75bacef057c45471c261c9a88832951", kill_on_drop: false }` [INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "fbce20acf44a8350627c4b94a868e2c9b75bacef057c45471c261c9a88832951" "/opt/rustwide/cargo-home/bin/cargo" "+1.99.0-beta.8" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "fbce20acf44a8350627c4b94a868e2c9b75bacef057c45471c261c9a88832951", kill_on_drop: false }` [INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-w" "/opt/rustwide/workdir" "--user" "0:0" "fbce20acf44a8350627c4b94a868e2c9b75bacef057c45471c261c9a88832951" "/opt/rustwide/cargo-home/bin/cargo" "+1.99.0-beta.8" "doc" "--frozen" "--no-deps" "--document-private-items" "--message-format=json", kill_on_drop: false }` [INFO] [stderr] Compiling glob v0.3.3 [INFO] [stderr] Compiling regex-syntax v0.8.11 [INFO] [stderr] Compiling memchr v2.8.2 [INFO] [stderr] Compiling bindgen v0.72.1 [INFO] [stderr] Compiling either v1.16.0 [INFO] [stderr] Compiling rustc-hash v2.1.3 [INFO] [stderr] Checking smallvec v1.15.2 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling bitflags v2.13.0 [INFO] [stderr] Compiling quick-error v1.2.3 [INFO] [stderr] Compiling cc v1.2.65 [INFO] [stderr] Checking zerofrom v0.1.8 [INFO] [stderr] Compiling thiserror-impl v1.0.69 [INFO] [stderr] Checking percent-encoding v2.3.2 [INFO] [stderr] Compiling strum_macros v0.26.4 [INFO] [stderr] Checking yoke v0.8.3 [INFO] [stderr] Compiling fs-utils v1.1.4 [INFO] [stderr] Compiling derive-new v0.6.0 [INFO] [stderr] Compiling itertools v0.13.0 [INFO] [stderr] Compiling derive-new v0.7.0 [INFO] [stderr] Checking form_urlencoded v1.2.2 [INFO] [stderr] Checking ieee754 v0.2.6 [INFO] [stderr] Checking linear-map v1.2.0 [INFO] [stderr] Checking custom_derive v0.1.7 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Checking zerovec v0.11.6 [INFO] [stderr] Checking zerotrie v0.2.4 [INFO] [stderr] Compiling clang-sys v1.8.1 [INFO] [stderr] Checking aho-corasick v1.1.4 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling nom v7.1.3 [INFO] [stderr] Checking tinystr v0.8.3 [INFO] [stderr] Checking potential_utf v0.1.5 [INFO] [stderr] Checking icu_collections v2.1.1 [INFO] [stderr] Checking icu_locale_core v2.1.1 [INFO] [stderr] Checking thiserror v1.0.69 [INFO] [stderr] Checking regex-automata v0.4.18 [INFO] [stderr] Compiling openssl-src v300.6.1+3.6.3 [INFO] [stderr] Compiling cmake v0.1.58 [INFO] [stderr] Compiling openssl-sys v0.9.117 [INFO] [stderr] Compiling bzip2-sys v0.1.13+1.0.8 [INFO] [stderr] Compiling curl-sys v0.4.89+curl-8.20.0 [INFO] [stderr] Compiling lzma-sys v0.1.20 [INFO] [stderr] Compiling libz-sys v1.1.29 [INFO] [stderr] Checking icu_provider v2.1.1 [INFO] [stderr] Checking icu_normalizer v2.1.1 [INFO] [stderr] Checking icu_properties v2.1.2 [INFO] [stderr] Compiling cexpr v0.6.0 [INFO] [stderr] Compiling regex v1.13.1 [INFO] [stderr] Checking bio-types v1.0.4 [INFO] [stderr] Checking idna_adapter v1.2.1 [INFO] [stderr] Checking idna v1.1.0 [INFO] [stderr] Checking url v2.5.8 [INFO] [stderr] Compiling hts-sys v2.2.1 [INFO] [stderr] Documenting extended-htslib v0.4.3 (/opt/rustwide/workdir) [INFO] [stdout] warning: unresolved link to `i` [INFO] [stdout] --> src/bam/record.rs:1883:38 [INFO] [stdout] | [INFO] [stdout] 1883 | /// Use index based access seq()[i], for checked, safe access. [INFO] [stdout] | ^ no item named `i` in scope [INFO] [stdout] | [INFO] [stdout] = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]` [INFO] [stdout] = note: `#[warn(rustdoc::broken_intra_doc_links)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unclosed HTML tag `str` [INFO] [stdout] --> src/bam/record.rs:1898:73 [INFO] [stdout] | [INFO] [stdout] 1898 | /// Return a specific range of nucleotides (sequence-based 0) as Cow, return Err if out of bounds [INFO] [stdout] | ^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(rustdoc::invalid_html_tags)]` on by default [INFO] [stdout] help: try marking as source code [INFO] [stdout] | [INFO] [stdout] 1898 | /// Return a specific range of nucleotides (sequence-based 0) as `Cow`, return Err if out of bounds [INFO] [stdout] | + + [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: this URL is not a hyperlink [INFO] [stdout] --> src/bam/record.rs:2901:33 [INFO] [stdout] | [INFO] [stdout] 2901 | /// for the first mod. See https://github.com/samtools/htslib/issues/1635 [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: bare URLs are not automatically turned into clickable links [INFO] [stdout] = note: `#[warn(rustdoc::bare_urls)]` on by default [INFO] [stdout] help: use an automatic link instead [INFO] [stdout] | [INFO] [stdout] 2901 | /// for the first mod. See [INFO] [stdout] | + + [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unclosed HTML tag `String` [INFO] [stdout] --> src/faidx/mod.rs:189:32 [INFO] [stdout] | [INFO] [stdout] 189 | /// Returns a Result> for all seq names. [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] help: try marking as source code [INFO] [stdout] | [INFO] [stdout] 189 | /// Returns a `Result>` for all seq names. [INFO] [stdout] | + + [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 2m 14s [INFO] [stderr] Generated /opt/rustwide/target/doc/extended_htslib/index.html [INFO] running `Command { std: "docker" "inspect" "fbce20acf44a8350627c4b94a868e2c9b75bacef057c45471c261c9a88832951", kill_on_drop: false }` [INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "RUSTC_BOOTSTRAP=1" "-e" "DOCS_RS=1" "-w" "/opt/rustwide/workdir" "--user" "0:0" "fbce20acf44a8350627c4b94a868e2c9b75bacef057c45471c261c9a88832951" "/opt/rustwide/cargo-home/bin/cargo" "+1.99.0-beta.8" "rustdoc" "--lib" "-Zrustdoc-map" "--config" "build.rustdocflags=[\"--cfg\", \"docsrs\", \"-Z\", \"unstable-options\", \"--document-private-items\"]" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.106 [INFO] [stderr] Compiling thiserror v1.0.69 [INFO] [stderr] Compiling thiserror v2.0.18 [INFO] [stderr] Compiling quote v1.0.46 [INFO] [stderr] Compiling syn v2.0.118 [INFO] [stderr] Compiling synstructure v0.13.2 [INFO] [stderr] Compiling bindgen v0.72.1 [INFO] [stderr] Compiling zerofrom-derive v0.1.7 [INFO] [stderr] Compiling yoke-derive v0.8.2 [INFO] [stderr] Compiling zerovec-derive v0.11.3 [INFO] [stderr] Compiling displaydoc v0.2.6 [INFO] [stderr] Compiling thiserror-impl v1.0.69 [INFO] [stderr] Compiling strum_macros v0.26.4 [INFO] [stderr] Compiling derive-new v0.6.0 [INFO] [stderr] Compiling thiserror-impl v2.0.18 [INFO] [stderr] Compiling derive-new v0.7.0 [INFO] [stderr] Checking zerofrom v0.1.8 [INFO] [stderr] Checking yoke v0.8.3 [INFO] [stderr] Checking zerovec v0.11.6 [INFO] [stderr] Checking zerotrie v0.2.4 [INFO] [stderr] Checking bio-types v1.0.4 [INFO] [stderr] Checking tinystr v0.8.3 [INFO] [stderr] Checking potential_utf v0.1.5 [INFO] [stderr] Checking icu_collections v2.1.1 [INFO] [stderr] Checking icu_locale_core v2.1.1 [INFO] [stderr] Checking icu_provider v2.1.1 [INFO] [stderr] Checking icu_normalizer v2.1.1 [INFO] [stderr] Checking icu_properties v2.1.2 [INFO] [stderr] Checking idna_adapter v1.2.1 [INFO] [stderr] Checking idna v1.1.0 [INFO] [stderr] Checking url v2.5.8 [INFO] [stderr] Compiling hts-sys v2.2.1 [INFO] [stderr] Documenting extended-htslib v0.4.3 (/opt/rustwide/workdir) [INFO] [stdout] warning: unresolved link to `i` [INFO] [stdout] --> src/bam/record.rs:1883:38 [INFO] [stdout] | [INFO] [stdout] 1883 | /// Use index based access seq()[i], for checked, safe access. [INFO] [stdout] | ^ no item named `i` in scope [INFO] [stdout] | [INFO] [stdout] = help: to escape `[` and `]` characters, add '\' before them like `\[` or `\]` [INFO] [stdout] = note: `#[warn(rustdoc::broken_intra_doc_links)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unclosed HTML tag `str` [INFO] [stdout] --> src/bam/record.rs:1898:73 [INFO] [stdout] | [INFO] [stdout] 1898 | /// Return a specific range of nucleotides (sequence-based 0) as Cow, return Err if out of bounds [INFO] [stdout] | ^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(rustdoc::invalid_html_tags)]` on by default [INFO] [stdout] help: try marking as source code [INFO] [stdout] | [INFO] [stdout] 1898 | /// Return a specific range of nucleotides (sequence-based 0) as `Cow`, return Err if out of bounds [INFO] [stdout] | + + [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: this URL is not a hyperlink [INFO] [stdout] --> src/bam/record.rs:2901:33 [INFO] [stdout] | [INFO] [stdout] 2901 | /// for the first mod. See https://github.com/samtools/htslib/issues/1635 [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: bare URLs are not automatically turned into clickable links [INFO] [stdout] = note: `#[warn(rustdoc::bare_urls)]` on by default [INFO] [stdout] help: use an automatic link instead [INFO] [stdout] | [INFO] [stdout] 2901 | /// for the first mod. See [INFO] [stdout] | + + [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unclosed HTML tag `String` [INFO] [stdout] --> src/faidx/mod.rs:189:32 [INFO] [stdout] | [INFO] [stdout] 189 | /// Returns a Result> for all seq names. [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] help: try marking as source code [INFO] [stdout] | [INFO] [stdout] 189 | /// Returns a `Result>` for all seq names. [INFO] [stdout] | + + [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 14.40s [INFO] [stderr] Generated /opt/rustwide/target/doc/extended_htslib/index.html [INFO] running `Command { std: "docker" "inspect" "fbce20acf44a8350627c4b94a868e2c9b75bacef057c45471c261c9a88832951", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "fbce20acf44a8350627c4b94a868e2c9b75bacef057c45471c261c9a88832951", kill_on_drop: false }` [INFO] [stdout] fbce20acf44a8350627c4b94a868e2c9b75bacef057c45471c261c9a88832951