[INFO] cloning repository https://github.com/kblin/nrps-rs
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/kblin/nrps-rs" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fkblin%2Fnrps-rs", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fkblin%2Fnrps-rs'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 1e534938a2e03875d0f070c6f959ffa8919c7a8c
[INFO] testing kblin/nrps-rs against 1.99.0-beta.1+cargoflags=--release for beta-release-1.99-2
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fkblin%2Fnrps-rs" "/workspace/builds/worker-0-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-0-tc2/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/kblin/nrps-rs
[INFO] finished tweaking git repo https://github.com/kblin/nrps-rs
[INFO] tweaked toml for git repo https://github.com/kblin/nrps-rs written to /workspace/builds/worker-0-tc2/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/kblin/nrps-rs on toolchain 1.99.0-beta.1
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.99.0-beta.1" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/kblin/nrps-rs already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.99.0-beta.1" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:8683fc1fc2eb5c9ac98e0d076ab094b2ffac7f99da555d2b6a2e27f346de2ec7" "sleep" "infinity", kill_on_drop: false }`
[INFO] [stdout] 0c9702014e0b39b38b00f6dbdd2c45fcdbd717ae0db208031027c34fe6881dd0
[INFO] running `Command { std: "docker" "start" "0c9702014e0b39b38b00f6dbdd2c45fcdbd717ae0db208031027c34fe6881dd0", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "0c9702014e0b39b38b00f6dbdd2c45fcdbd717ae0db208031027c34fe6881dd0", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "0c9702014e0b39b38b00f6dbdd2c45fcdbd717ae0db208031027c34fe6881dd0" "/opt/rustwide/cargo-home/bin/cargo" "+1.99.0-beta.1" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "0c9702014e0b39b38b00f6dbdd2c45fcdbd717ae0db208031027c34fe6881dd0", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-w" "/opt/rustwide/workdir" "--user" "0:0" "0c9702014e0b39b38b00f6dbdd2c45fcdbd717ae0db208031027c34fe6881dd0" "/opt/rustwide/cargo-home/bin/cargo" "+1.99.0-beta.1" "build" "--frozen" "--message-format=json" "--release", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.78
[INFO] [stderr]    Compiling unicode-ident v1.0.12
[INFO] [stderr]    Compiling serde v1.0.196
[INFO] [stderr]    Compiling rand_core v0.6.4
[INFO] [stderr]    Compiling utf8parse v0.2.1
[INFO] [stderr]    Compiling siphasher v0.3.11
[INFO] [stderr]    Compiling hashbrown v0.14.3
[INFO] [stderr]    Compiling colorchoice v1.0.0
[INFO] [stderr]    Compiling anstyle v1.0.6
[INFO] [stderr]    Compiling anstyle-parse v0.2.3
[INFO] [stderr]    Compiling equivalent v1.0.1
[INFO] [stderr]    Compiling rand v0.8.5
[INFO] [stderr]    Compiling anstyle-query v1.0.2
[INFO] [stderr]    Compiling phf_shared v0.11.2
[INFO] [stderr]    Compiling strsim v0.11.0
[INFO] [stderr]    Compiling clap_lex v0.7.0
[INFO] [stderr]    Compiling anstream v0.6.12
[INFO] [stderr]    Compiling heck v0.4.1
[INFO] [stderr]    Compiling thiserror v1.0.57
[INFO] [stderr]    Compiling winnow v0.5.40
[INFO] [stderr]    Compiling clap_builder v4.5.1
[INFO] [stderr]    Compiling quote v1.0.35
[INFO] [stderr]    Compiling phf_generator v0.11.2
[INFO] [stderr]    Compiling same-file v1.0.6
[INFO] [stderr]    Compiling syn v2.0.49
[INFO] [stderr]    Compiling indexmap v2.2.3
[INFO] [stderr]    Compiling walkdir v2.4.0
[INFO] [stderr]    Compiling serde_derive v1.0.196
[INFO] [stderr]    Compiling phf_macros v0.11.2
[INFO] [stderr]    Compiling clap_derive v4.5.0
[INFO] [stderr]    Compiling thiserror-impl v1.0.57
[INFO] [stderr]    Compiling phf v0.11.2
[INFO] [stderr]    Compiling clap v4.5.1
[INFO] [stderr]    Compiling serde_spanned v0.6.5
[INFO] [stderr]    Compiling toml_datetime v0.6.5
[INFO] [stderr]    Compiling toml_edit v0.19.15
[INFO] [stderr]    Compiling toml v0.7.8
[INFO] [stderr]    Compiling nrps-rs v0.2.1 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `release` profile [optimized + debuginfo] target(s) in 1m 13s
[INFO] running `Command { std: "docker" "inspect" "0c9702014e0b39b38b00f6dbdd2c45fcdbd717ae0db208031027c34fe6881dd0", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-w" "/opt/rustwide/workdir" "--user" "0:0" "0c9702014e0b39b38b00f6dbdd2c45fcdbd717ae0db208031027c34fe6881dd0" "/opt/rustwide/cargo-home/bin/cargo" "+1.99.0-beta.1" "test" "--frozen" "--no-run" "--message-format=json" "--release", kill_on_drop: false }`
[INFO] [stderr]    Compiling semver v1.0.21
[INFO] [stderr]    Compiling autocfg v1.1.0
[INFO] [stderr]    Compiling futures-sink v0.3.30
[INFO] [stderr]    Compiling futures-core v0.3.30
[INFO] [stderr]    Compiling pin-utils v0.1.0
[INFO] [stderr]    Compiling pin-project-lite v0.2.13
[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]    Compiling futures-macro v0.3.30
[INFO] [stderr]    Compiling memchr v2.7.1
[INFO] [stderr]    Compiling futures-io v0.3.30
[INFO] [stderr]    Compiling futures-channel v0.3.30
[INFO] [stderr]    Compiling futures-task v0.3.30
[INFO] [stderr]    Compiling cfg-if v1.0.0
[INFO] [stderr]    Compiling slab v0.4.9
[INFO] [stderr]    Compiling futures-timer v3.0.2
[INFO] [stderr]    Compiling assert_approx_eq v1.1.0
[INFO] [stderr]    Compiling rustc_version v0.4.0
[INFO] [stderr]    Compiling rstest_macros v0.16.0
[INFO] [stderr]    Compiling futures-util v0.3.30
[INFO] [stderr]    Compiling futures-executor v0.3.30
[INFO] [stderr]    Compiling futures v0.3.30
[INFO] [stderr]    Compiling rstest v0.16.0
[INFO] [stderr]    Compiling nrps-rs v0.2.1 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `release` profile [optimized + debuginfo] target(s) in 22.66s
[INFO] running `Command { std: "docker" "inspect" "0c9702014e0b39b38b00f6dbdd2c45fcdbd717ae0db208031027c34fe6881dd0", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-w" "/opt/rustwide/workdir" "--user" "0:0" "0c9702014e0b39b38b00f6dbdd2c45fcdbd717ae0db208031027c34fe6881dd0" "/opt/rustwide/cargo-home/bin/cargo" "+1.99.0-beta.1" "test" "--frozen" "--release", kill_on_drop: false }`
[INFO] [stderr]     Finished `release` profile [optimized + debuginfo] target(s) in 0.07s
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/release/deps/nrps_rs-7a2c96e6d575ec41)
[INFO] [stdout] 
[INFO] [stdout] running 26 tests
[INFO] [stdout] test config::tests::test_model_dir_set ... ok
[INFO] [stdout] test config::tests::test_model_dir_default ... ok
[INFO] [stdout] test config::tests::test_override_stach ... ok
[INFO] [stdout] test config::tests::test_override_both ... ok
[INFO] [stdout] test config::tests::test_skip_v3 ... ok
[INFO] [stdout] test config::tests::test_stach_extra ... ok
[INFO] [stdout] test encodings::rausch::tests::test_rausch_encoder ... ok
[INFO] [stdout] test config::tests::test_override_model_dir ... ok
[INFO] [stdout] test config::tests::test_skip_v1 ... ok
[INFO] [stdout] test config::tests::test_skip_v2 ... ok
[INFO] [stdout] test config::tests::test_skip_stachelhaus ... ok
[INFO] [stdout] test encodings::tests::test_get_value ... ok
[INFO] [stdout] test encodings::rausch::tests::test_rausch_legacy_concatenation ... ok
[INFO] [stdout] test encodings::wold::tests::test_wold_encoder ... ok
[INFO] [stdout] test predictors::predictions::tests::test_add ... ok
[INFO] [stdout] test predictors::predictions::tests::test_get_best ... ok
[INFO] [stdout] test predictors::stachelhaus::tests::test_extract_aa10 ... ok
[INFO] [stdout] test predictors::stachelhaus::tests::test_extract_aa10_error ... ok
[INFO] [stdout] test svm::vectors::tests::test_dist ... ok
[INFO] [stdout] test predictors::stachelhaus::tests::test_hamming_dist ... ok
[INFO] [stdout] test svm::vectors::tests::test_similarity ... ok
[INFO] [stdout] test svm::vectors::tests::test_from_line ... ok
[INFO] [stdout] test svm::vectors::tests::test_element_subtract ... ok
[INFO] [stderr]      Running unittests src/main.rs (/opt/rustwide/target/release/deps/nrps_rs-7aa99605b03ea1ce)
[INFO] [stdout] test tests::test_parse_domains ... ok
[INFO] [stdout] test predictors::stachelhaus::tests::test_calculate_score ... ok
[INFO] [stdout] test svm::vectors::tests::test_square_dist ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 26 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]    Doc-tests nrps_rs
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "0c9702014e0b39b38b00f6dbdd2c45fcdbd717ae0db208031027c34fe6881dd0", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "0c9702014e0b39b38b00f6dbdd2c45fcdbd717ae0db208031027c34fe6881dd0", kill_on_drop: false }`
[INFO] [stdout] 0c9702014e0b39b38b00f6dbdd2c45fcdbd717ae0db208031027c34fe6881dd0
