[INFO] fetching crate orphos-cli 0.3.0...
[INFO] testing orphos-cli-0.3.0 against 1.99.0-beta.1+cargoflags=--release for beta-release-1.99-2
[INFO] extracting crate orphos-cli 0.3.0 into /workspace/builds/worker-6-tc2/source
[INFO] started tweaking crates.io crate orphos-cli 0.3.0
[INFO] removed 0 missing tests
[INFO] finished tweaking crates.io crate orphos-cli 0.3.0
[INFO] tweaked toml for crates.io crate orphos-cli 0.3.0 written to /workspace/builds/worker-6-tc2/source/Cargo.toml
[INFO] validating manifest of crates.io crate orphos-cli 0.3.0 on toolchain 1.99.0-beta.1
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.99.0-beta.1" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate crates.io crate orphos-cli 0.3.0 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.99.0-beta.1" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:8683fc1fc2eb5c9ac98e0d076ab094b2ffac7f99da555d2b6a2e27f346de2ec7" "sleep" "infinity", kill_on_drop: false }`
[INFO] [stdout] f99b355a83f660d71fb4d01231fcf34f80afe4f126bfb724a1903ea80ee018c2
[INFO] running `Command { std: "docker" "start" "f99b355a83f660d71fb4d01231fcf34f80afe4f126bfb724a1903ea80ee018c2", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "f99b355a83f660d71fb4d01231fcf34f80afe4f126bfb724a1903ea80ee018c2", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "f99b355a83f660d71fb4d01231fcf34f80afe4f126bfb724a1903ea80ee018c2" "/opt/rustwide/cargo-home/bin/cargo" "+1.99.0-beta.1" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "f99b355a83f660d71fb4d01231fcf34f80afe4f126bfb724a1903ea80ee018c2", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-w" "/opt/rustwide/workdir" "--user" "0:0" "f99b355a83f660d71fb4d01231fcf34f80afe4f126bfb724a1903ea80ee018c2" "/opt/rustwide/cargo-home/bin/cargo" "+1.99.0-beta.1" "build" "--frozen" "--message-format=json" "--release", kill_on_drop: false }`
[INFO] [stderr]    Compiling quote v1.0.47
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[INFO] [stderr]    Compiling orphos-core v0.3.0
[INFO] [stderr]    Compiling orphos-cli v0.3.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `release` profile [optimized] target(s) in 1m 01s
[INFO] running `Command { std: "docker" "inspect" "f99b355a83f660d71fb4d01231fcf34f80afe4f126bfb724a1903ea80ee018c2", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-w" "/opt/rustwide/workdir" "--user" "0:0" "f99b355a83f660d71fb4d01231fcf34f80afe4f126bfb724a1903ea80ee018c2" "/opt/rustwide/cargo-home/bin/cargo" "+1.99.0-beta.1" "test" "--frozen" "--no-run" "--message-format=json" "--release", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.189
[INFO] [stderr]    Compiling zerocopy v0.8.55
[INFO] [stderr]    Compiling serde_core v1.0.229
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[INFO] [stderr]    Compiling syn v2.0.119
[INFO] [stderr]    Compiling serde v1.0.229
[INFO] [stderr]    Compiling typenum v1.20.1
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[INFO] [stderr]    Compiling rand_distr v0.4.3
[INFO] [stderr]    Compiling nalgebra v0.33.3
[INFO] [stderr]    Compiling statrs v0.18.0
[INFO] [stderr]    Compiling bio v4.0.1
[INFO] [stderr]    Compiling orphos-core v0.3.0
[INFO] [stderr]    Compiling orphos-cli v0.3.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `release` profile [optimized] target(s) in 1m 05s
[INFO] running `Command { std: "docker" "inspect" "f99b355a83f660d71fb4d01231fcf34f80afe4f126bfb724a1903ea80ee018c2", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-w" "/opt/rustwide/workdir" "--user" "0:0" "f99b355a83f660d71fb4d01231fcf34f80afe4f126bfb724a1903ea80ee018c2" "/opt/rustwide/cargo-home/bin/cargo" "+1.99.0-beta.1" "test" "--frozen" "--release", kill_on_drop: false }`
[INFO] [stderr]     Finished `release` profile [optimized] target(s) in 0.08s
[INFO] [stderr]      Running unittests src/main.rs (/opt/rustwide/target/release/deps/orphos-aef1905cf01a2bec)
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/format_bed.rs (/opt/rustwide/target/release/deps/format_bed-f828866a40adb247)
[INFO] [stdout] 
[INFO] [stdout] running 1 test
[INFO] [stdout] test bed_format_structure_selected_fixtures ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 1 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/format_gbk.rs (/opt/rustwide/target/release/deps/format_gbk-a187f9fc61362cdf)
[INFO] [stdout] 
[INFO] [stdout] running 1 test
[INFO] [stdout] test gbk_format_equivalence_meta_mode ... ignored
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 1 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/format_gff.rs (/opt/rustwide/target/release/deps/format_gff-5eff90f0bd822616)
[INFO] [stdout] 
[INFO] [stdout] running 1 test
[INFO] [stdout] test gff_format_equivalence_single_mode_selected_fixtures ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 1 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/golden_outputs.rs (/opt/rustwide/target/release/deps/golden_outputs-2311e75d015256be)
[INFO] [stdout] 
[INFO] [stdout] running 6 tests
[INFO] [stdout] test small_bed_output_snapshot ... ok
[INFO] [stdout] test small_gbk_output_snapshot ... ok
[INFO] [stdout] test small_gca_output_snapshot ... ok
[INFO] [stdout] test small_gff_output_snapshot ... ok
[INFO] [stdout] test small_sco_output_snapshot ... ok
[INFO] [stdout] test cli_help_snapshot ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 6 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/meta_genomes_equivalence.rs (/opt/rustwide/target/release/deps/meta_genomes_equivalence-b718f6a7f7c193bf)
[INFO] [stdout] 
[INFO] [stdout] running 2 tests
[INFO] [stdout] test meta_genome_fixtures_equivalence_summary ... ok
[INFO] [stdout] test meta_mode_individual_files ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 2 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/reference_annotations.rs (/opt/rustwide/target/release/deps/reference_annotations-a2516e979d6d78bc)
[INFO] [stdout] 
[INFO] [stdout] running 1 test
[INFO] [stdout] test selected_fixtures_full_refseq_cds_summary ... FAILED
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout] 
[INFO] [stdout] ---- selected_fixtures_full_refseq_cds_summary stdout ----
[INFO] [stdout] 
[INFO] [stdout] thread 'selected_fixtures_full_refseq_cds_summary' (3652) panicked at tests/reference_annotations.rs:112:10:
[INFO] [stdout] called `Result::unwrap()` on an `Err` value: Os { code: 2, kind: NotFound, message: "No such file or directory" }
[INFO] [stdout] stack backtrace:
[INFO] [stdout]    0:     0x5d5fc44ac061 - <<std[104cf6e2632825ea]::sys::backtrace::BacktraceLock>::print::DisplayBacktrace as core[7c831bd917ebf35f]::fmt::Display>::fmt
[INFO] [stdout]    1:     0x5d5fc44c560a - core[7c831bd917ebf35f]::fmt::write
[INFO] [stdout]    2:     0x5d5fc44b1e5c - <alloc[2fdc3f7464fcf288]::vec::Vec<u8> as core[7c831bd917ebf35f]::io::write::Write>::write_fmt
[INFO] [stdout]    3:     0x5d5fc4484ca6 - std[104cf6e2632825ea]::panicking::default_hook::{closure#0}
[INFO] [stdout]    4:     0x5d5fc44a30c9 - std[104cf6e2632825ea]::panicking::default_hook
[INFO] [stdout]    5:     0x5d5fc43c1060 - test[73009c9f9aebf890]::test_main_inner::<test[73009c9f9aebf890]::test_main_static::{closure#0}>::{closure#0}
[INFO] [stdout]    6:     0x5d5fc44a3282 - std[104cf6e2632825ea]::panicking::panic_with_hook
[INFO] [stdout]    7:     0x5d5fc4484d52 - std[104cf6e2632825ea]::panicking::panic_handler::{closure#0}
[INFO] [stdout]    8:     0x5d5fc447ce59 - std[104cf6e2632825ea]::sys::backtrace::__rust_end_short_backtrace::<std[104cf6e2632825ea]::panicking::panic_handler::{closure#0}, !>
[INFO] [stdout]    9:     0x5d5fc44859ed - __rustc[b0d56fa5b193ad05]::rust_begin_unwind
[INFO] [stdout]   10:     0x5d5fc44c5dec - core[7c831bd917ebf35f]::panicking::panic_fmt
[INFO] [stdout]   11:     0x5d5fc44c5bc2 - core[7c831bd917ebf35f]::result::unwrap_failed
[INFO] [stdout]   12:     0x5d5fc43b1271 - <reference_annotations[5603a2bf6fa38f15]::selected_fixtures_full_refseq_cds_summary::{closure#0} as core[7c831bd917ebf35f]::ops::function::FnOnce<()>>::call_once
[INFO] [stdout]   13:     0x5d5fc43b434b - test[73009c9f9aebf890]::__rust_begin_short_backtrace::<core[7c831bd917ebf35f]::result::Result<(), alloc[2fdc3f7464fcf288]::string::String>, fn() -> core[7c831bd917ebf35f]::result::Result<(), alloc[2fdc3f7464fcf288]::string::String>>
[INFO] [stdout]   14:     0x5d5fc43c19b5 - test[73009c9f9aebf890]::run_test::{closure#0}
[INFO] [stdout]   15:     0x5d5fc43bad74 - std[104cf6e2632825ea]::sys::backtrace::__rust_begin_short_backtrace::<test[73009c9f9aebf890]::run_test::{closure#1}, ()>
[INFO] [stdout]   16:     0x5d5fc43c4b12 - <std[104cf6e2632825ea]::thread::lifecycle::spawn_unchecked<test[73009c9f9aebf890]::run_test::{closure#1}, ()>::{closure#1} as core[7c831bd917ebf35f]::ops::function::FnOnce<()>>::call_once::{shim:vtable#0}
[INFO] [stdout]   17:     0x5d5fc44ab009 - <std[104cf6e2632825ea]::sys::thread::unix::Thread>::new::thread_start
[INFO] [stdout]   18:     0x79017cd1e07a - <unknown>
[INFO] [stdout]   19:     0x79017cdb1534 - clone
[INFO] [stdout]   20:                0x0 - <unknown>
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout]     selected_fixtures_full_refseq_cds_summary
[INFO] [stdout] 
[INFO] [stdout] test result: FAILED. 0 passed; 1 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr] error: test failed, to rerun pass `--test reference_annotations`
[INFO] running `Command { std: "docker" "inspect" "f99b355a83f660d71fb4d01231fcf34f80afe4f126bfb724a1903ea80ee018c2", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "f99b355a83f660d71fb4d01231fcf34f80afe4f126bfb724a1903ea80ee018c2", kill_on_drop: false }`
[INFO] [stdout] f99b355a83f660d71fb4d01231fcf34f80afe4f126bfb724a1903ea80ee018c2
