[INFO] fetching crate rsomics-methyl 0.1.0...
[INFO] testing rsomics-methyl-0.1.0 against 1.99.0-beta.8+cargoflags=--release for beta-release-1.100-3
[INFO] extracting crate rsomics-methyl 0.1.0 into /workspace/builds/worker-1-tc1/source
[INFO] started tweaking crates.io crate rsomics-methyl 0.1.0
[INFO] removed 0 missing tests
[INFO] finished tweaking crates.io crate rsomics-methyl 0.1.0
[INFO] tweaked toml for crates.io crate rsomics-methyl 0.1.0 written to /workspace/builds/worker-1-tc1/source/Cargo.toml
[INFO] validating manifest of crates.io crate rsomics-methyl 0.1.0 on toolchain 1.99.0-beta.8
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.99.0-beta.8" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate crates.io crate rsomics-methyl 0.1.0 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.99.0-beta.8" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded thiserror-impl v2.0.19
[INFO] [stderr]   Downloaded thiserror v2.0.19
[INFO] [stderr]   Downloaded rsomics-pileup v0.8.0
[INFO] [stderr]   Downloaded rsomics-bamio v0.8.1
[INFO] [stderr]   Downloaded fs-utils v1.1.4
[INFO] [stderr]   Downloaded derive-new v0.6.0
[INFO] [stderr]   Downloaded terminal_size v0.4.4
[INFO] [stderr]   Downloaded semver v0.1.20
[INFO] [stderr]   Downloaded derive-new v0.7.0
[INFO] [stderr]   Downloaded newtype_derive v0.1.6
[INFO] [stderr]   Downloaded custom_derive v0.1.7
[INFO] [stderr]   Downloaded noodles-core v0.20.0
[INFO] [stderr]   Downloaded rsomics-intervals v0.3.0
[INFO] [stderr]   Downloaded rust-htslib v1.0.1
[INFO] [stderr]   Downloaded rustc_version v0.1.7
[INFO] [stderr]   Downloaded rsomics-help v0.4.0
[INFO] [stderr]   Downloaded ieee754 v0.2.6
[INFO] [stderr]   Downloaded either v1.17.0
[INFO] [stderr]   Downloaded bio-types v1.0.4
[INFO] [stderr]   Downloaded libdeflater v1.25.2
[INFO] [stderr]   Downloaded lexical-core v1.0.6
[INFO] [stderr]   Downloaded noodles-fasta v0.61.0
[INFO] [stderr]   Downloaded md-5 v0.11.0
[INFO] [stderr]   Downloaded noodles v0.110.0
[INFO] [stderr]   Downloaded linear-map v1.2.0
[INFO] [stderr]   Downloaded libloading v0.8.9
[INFO] [stderr]   Downloaded clap_derive v4.6.4
[INFO] [stderr]   Downloaded noodles-util v0.79.0
[INFO] [stderr]   Downloaded noodles-csi v0.56.0
[INFO] [stderr]   Downloaded bit-vec v0.9.1
[INFO] [stderr]   Downloaded lexical-parse-integer v1.0.6
[INFO] [stderr]   Downloaded hybrid-array v0.4.14
[INFO] [stderr]   Downloaded noodles-bgzf v0.47.0
[INFO] [stderr]   Downloaded bzip2 v0.6.1
[INFO] [stderr]   Downloaded clang-sys v1.9.1
[INFO] [stderr]   Downloaded rsomics-common v0.12.1
[INFO] [stderr]   Downloaded libbz2-rs-sys v0.2.5
[INFO] [stderr]   Downloaded clap v4.6.5
[INFO] [stderr]   Downloaded lexical-write-integer v1.0.6
[INFO] [stderr]   Downloaded noodles-bam v0.89.0
[INFO] [stderr]   Downloaded cc v1.4.0
[INFO] [stderr]   Downloaded noodles-sam v0.85.0
[INFO] [stderr]   Downloaded lexical-util v1.0.7
[INFO] [stderr]   Downloaded lexical-write-float v1.0.6
[INFO] [stderr]   Downloaded noodles-cram v0.93.0
[INFO] [stderr]   Downloaded bindgen v0.72.1
[INFO] [stderr]   Downloaded clap_builder v4.6.5
[INFO] [stderr]   Downloaded lexical-parse-float v1.0.6
[INFO] [stderr]   Downloaded zlib-rs v0.6.6
[INFO] [stderr]   Downloaded libdeflate-sys v1.25.2
[INFO] [stderr]   Downloaded lzma-rust2 v0.16.5
[INFO] [stderr]   Downloaded bstr v1.13.0
[INFO] [stderr]   Downloaded bzip2-sys v0.1.13+1.0.8
[INFO] [stderr]   Downloaded regex-automata v0.4.16
[INFO] [stderr]   Downloaded libz-sys v1.1.29
[INFO] [stderr]   Downloaded hts-sys v2.2.1
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:77db811e55d90add9212f6832c23229e3de5f1c1f9905e8cb07319ea15df73ac" "sleep" "infinity", kill_on_drop: false }`
[INFO] [stdout] 4962fac3a47e918f7d23514e7dc872169b8e5be1b5e6ec31ded149f6e6f7bd1b
[INFO] running `Command { std: "docker" "start" "4962fac3a47e918f7d23514e7dc872169b8e5be1b5e6ec31ded149f6e6f7bd1b", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "4962fac3a47e918f7d23514e7dc872169b8e5be1b5e6ec31ded149f6e6f7bd1b", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "4962fac3a47e918f7d23514e7dc872169b8e5be1b5e6ec31ded149f6e6f7bd1b" "/opt/rustwide/cargo-home/bin/cargo" "+1.99.0-beta.8" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "4962fac3a47e918f7d23514e7dc872169b8e5be1b5e6ec31ded149f6e6f7bd1b", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-w" "/opt/rustwide/workdir" "--user" "0:0" "4962fac3a47e918f7d23514e7dc872169b8e5be1b5e6ec31ded149f6e6f7bd1b" "/opt/rustwide/cargo-home/bin/cargo" "+1.99.0-beta.8" "build" "--frozen" "--message-format=json" "--release", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.107
[INFO] [stderr]    Compiling unicode-ident v1.0.24
[INFO] [stderr]    Compiling quote v1.0.47
[INFO] [stderr]    Compiling libc v0.2.189
[INFO] [stderr]    Compiling find-msvc-tools v0.1.9
[INFO] [stderr]    Compiling shlex v2.0.1
[INFO] [stderr]    Compiling memchr v2.8.3
[INFO] [stderr]    Compiling stable_deref_trait v1.2.1
[INFO] [stderr]    Compiling pkg-config v0.3.33
[INFO] [stderr]    Compiling bitflags v2.13.1
[INFO] [stderr]    Compiling crossbeam-utils v0.8.22
[INFO] [stderr]    Compiling lexical-util v1.0.7
[INFO] [stderr]    Compiling typenum v1.20.1
[INFO] [stderr]    Compiling zlib-rs v0.6.6
[INFO] [stderr]    Compiling glob v0.3.4
[INFO] [stderr]    Compiling litemap v0.8.2
[INFO] [stderr]    Compiling writeable v0.6.3
[INFO] [stderr]    Compiling bytes v1.12.1
[INFO] [stderr]    Compiling rustix v1.1.4
[INFO] [stderr]    Compiling minimal-lexical v0.2.1
[INFO] [stderr]    Compiling regex-syntax v0.8.11
[INFO] [stderr]    Compiling clang-sys v1.9.1
[INFO] [stderr]    Compiling icu_normalizer_data v2.2.0
[INFO] [stderr]    Compiling linux-raw-sys v0.12.1
[INFO] [stderr]    Compiling icu_properties_data v2.2.0
[INFO] [stderr]    Compiling const-oid v0.10.2
[INFO] [stderr]    Compiling hashbrown v0.17.1
[INFO] [stderr]    Compiling libloading v0.8.9
[INFO] [stderr]    Compiling crossbeam-channel v0.5.16
[INFO] [stderr]    Compiling lexical-write-integer v1.0.6
[INFO] [stderr]    Compiling lexical-parse-integer v1.0.6
[INFO] [stderr]    Compiling vcpkg v0.2.15
[INFO] [stderr]    Compiling bit-vec v0.9.1
[INFO] [stderr]    Compiling bstr v1.13.0
[INFO] [stderr]    Compiling nom v7.1.3
[INFO] [stderr]    Compiling lexical-write-float v1.0.6
[INFO] [stderr]    Compiling syn v2.0.119
[INFO] [stderr]    Compiling syn v3.0.3
[INFO] [stderr]    Compiling hybrid-array v0.4.14
[INFO] [stderr]    Compiling lexical-parse-float v1.0.6
[INFO] [stderr]    Compiling bindgen v0.72.1
[INFO] [stderr]    Compiling either v1.17.0
[INFO] [stderr]    Compiling jobserver v0.1.35
[INFO] [stderr]    Compiling crypto-common v0.2.2
[INFO] [stderr]    Compiling block-buffer v0.12.1
[INFO] [stderr]    Compiling utf8parse v0.2.2
[INFO] [stderr]    Compiling cc v1.4.0
[INFO] [stderr]    Compiling anstyle-parse v1.0.0
[INFO] [stderr]    Compiling indexmap v2.14.0
[INFO] [stderr]    Compiling itertools v0.13.0
[INFO] [stderr]    Compiling lexical-core v1.0.6
[INFO] [stderr]    Compiling regex-automata v0.4.16
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]    Compiling rustversion v1.0.23
[INFO] [stderr]    Compiling noodles-core v0.20.0
[INFO] [stderr]    Compiling quick-error v1.2.3
[INFO] [stderr]    Compiling colorchoice v1.0.5
[INFO] [stderr]    Compiling serde_core v1.0.229
[INFO] [stderr]    Compiling anstyle v1.0.14
[INFO] [stderr]    Compiling digest v0.11.3
[INFO] [stderr]    Compiling smallvec v1.15.2
[INFO] [stderr]    Compiling thiserror v2.0.19
[INFO] [stderr]    Compiling rustc-hash v2.1.3
[INFO] [stderr]    Compiling cpufeatures v0.3.0
[INFO] [stderr]    Compiling is_terminal_polyfill v1.70.2
[INFO] [stderr]    Compiling anstyle-query v1.1.5
[INFO] [stderr]    Compiling sha2 v0.11.0
[INFO] [stderr]    Compiling fs-utils v1.1.4
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]    Compiling aho-corasick v1.1.4
[INFO] [stderr]    Compiling anstream v1.0.0
[INFO] [stderr]    Compiling getrandom v0.4.3
[INFO] [stderr]    Compiling cexpr v0.6.0
[INFO] [stderr]    Compiling strsim v0.11.1
[INFO] [stderr]    Compiling zmij v1.0.23
[INFO] [stderr]    Compiling clap_lex v1.1.0
[INFO] [stderr]    Compiling libbz2-rs-sys v0.2.5
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling flate2 v1.1.9
[INFO] [stderr]    Compiling md-5 v0.11.0
[INFO] [stderr]    Compiling cmake v0.1.58
[INFO] [stderr]    Compiling bzip2 v0.6.1
[INFO] [stderr]    Compiling lzma-rust2 v0.16.5
[INFO] [stderr]    Compiling serde_json v1.0.151
[INFO] [stderr]    Compiling percent-encoding v2.3.2
[INFO] [stderr]    Compiling serde v1.0.229
[INFO] [stderr]    Compiling terminal_size v0.4.4
[INFO] [stderr]    Compiling libdeflate-sys v1.25.2
[INFO] [stderr]    Compiling bzip2-sys v0.1.13+1.0.8
[INFO] [stderr]    Compiling libz-sys v1.1.29
[INFO] [stderr]    Compiling lzma-sys v0.1.20
[INFO] [stderr]    Compiling clap_builder v4.6.5
[INFO] [stderr] error: could not compile `regex-syntax` (lib)
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/rustup-home/toolchains/1.99.0-beta.8-x86_64-unknown-linux-gnu/bin/rustc --crate-name regex_syntax --edition=2021 /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/regex-syntax-0.8.11/src/lib.rs --error-format=json --json=diagnostic-rendered-ansi,artifacts,future-incompat --crate-type lib --emit=dep-info,metadata,link -C opt-level=3 -C embed-bitcode=no --cfg 'feature="default"' --cfg 'feature="std"' --cfg 'feature="unicode"' --cfg 'feature="unicode-age"' --cfg 'feature="unicode-bool"' --cfg 'feature="unicode-case"' --cfg 'feature="unicode-gencat"' --cfg 'feature="unicode-perl"' --cfg 'feature="unicode-script"' --cfg 'feature="unicode-segment"' --check-cfg 'cfg(docsrs,test)' --check-cfg 'cfg(feature, values("arbitrary", "default", "std", "unicode", "unicode-age", "unicode-bool", "unicode-case", "unicode-gencat", "unicode-perl", "unicode-script", "unicode-segment"))' -C metadata=e3324ea7aa3cbba2 -C extra-filename=-7010b26951f94357 --out-dir /opt/rustwide/target/release/deps -C strip=debuginfo -L dependency=/opt/rustwide/target/release/deps --cap-lints allow --cap-lints=warn` (signal: 9, SIGKILL: kill)
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] [stderr] error: could not compile `syn` (lib)
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/rustup-home/toolchains/1.99.0-beta.8-x86_64-unknown-linux-gnu/bin/rustc --crate-name syn --edition=2021 /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/syn-2.0.119/src/lib.rs --error-format=json --json=diagnostic-rendered-ansi,artifacts,future-incompat --crate-type lib --emit=dep-info,metadata,link -C embed-bitcode=no -C debug-assertions=off --cfg 'feature="clone-impls"' --cfg 'feature="default"' --cfg 'feature="derive"' --cfg 'feature="extra-traits"' --cfg 'feature="fold"' --cfg 'feature="full"' --cfg 'feature="parsing"' --cfg 'feature="printing"' --cfg 'feature="proc-macro"' --cfg 'feature="visit"' --cfg 'feature="visit-mut"' --check-cfg 'cfg(docsrs,test)' --check-cfg 'cfg(feature, values("clone-impls", "default", "derive", "extra-traits", "fold", "full", "parsing", "printing", "proc-macro", "test", "visit", "visit-mut"))' -C metadata=ff218aa8803b35be -C extra-filename=-11e8de9af56786ed --out-dir /opt/rustwide/target/release/deps -C strip=debuginfo -L dependency=/opt/rustwide/target/release/deps --extern proc_macro2=/opt/rustwide/target/release/deps/libproc_macro2-58bd5a67493b0c92.rmeta --extern quote=/opt/rustwide/target/release/deps/libquote-bb159eae73371f0d.rmeta --extern unicode_ident=/opt/rustwide/target/release/deps/libunicode_ident-3d1450b03eaa80c7.rmeta --cap-lints allow --cap-lints=warn` (signal: 9, SIGKILL: kill)
[INFO] running `Command { std: "docker" "inspect" "4962fac3a47e918f7d23514e7dc872169b8e5be1b5e6ec31ded149f6e6f7bd1b", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "4962fac3a47e918f7d23514e7dc872169b8e5be1b5e6ec31ded149f6e6f7bd1b", kill_on_drop: false }`
[INFO] [stdout] 4962fac3a47e918f7d23514e7dc872169b8e5be1b5e6ec31ded149f6e6f7bd1b