[INFO] cloning repository https://github.com/fulcrumgenomics/k2tools
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/fulcrumgenomics/k2tools" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Ffulcrumgenomics%2Fk2tools", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Ffulcrumgenomics%2Fk2tools'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 7095261d375f31dabebe3679c96426fa2ec2fac9
[INFO] testing fulcrumgenomics/k2tools against 1.99.0-beta.8+cargoflags=--release for beta-release-1.100-3
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Ffulcrumgenomics%2Fk2tools" "/workspace/builds/worker-6-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-6-tc1/source'...
[INFO] [stderr] done.
[INFO] removed /workspace/builds/worker-6-tc1/source/.cargo/config.toml
[INFO] removed /workspace/builds/worker-6-tc1/source/rust-toolchain.toml
[INFO] started tweaking git repo https://github.com/fulcrumgenomics/k2tools
[INFO] finished tweaking git repo https://github.com/fulcrumgenomics/k2tools
[INFO] tweaked toml for git repo https://github.com/fulcrumgenomics/k2tools written to /workspace/builds/worker-6-tc1/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/fulcrumgenomics/k2tools on toolchain 1.99.0-beta.8
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.99.0-beta.8" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/fulcrumgenomics/k2tools already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.99.0-beta.8" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]  Downloading crates ...
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[INFO] [stderr]   Downloaded fgoxide v0.7.0
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[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:77db811e55d90add9212f6832c23229e3de5f1c1f9905e8cb07319ea15df73ac" "sleep" "infinity", kill_on_drop: false }`
[INFO] [stdout] c6b724276d670683220aa11c7d6f8558cee001b70e7f4a2dd868a12296925e21
[INFO] running `Command { std: "docker" "start" "c6b724276d670683220aa11c7d6f8558cee001b70e7f4a2dd868a12296925e21", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "c6b724276d670683220aa11c7d6f8558cee001b70e7f4a2dd868a12296925e21", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "c6b724276d670683220aa11c7d6f8558cee001b70e7f4a2dd868a12296925e21" "/opt/rustwide/cargo-home/bin/cargo" "+1.99.0-beta.8" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "c6b724276d670683220aa11c7d6f8558cee001b70e7f4a2dd868a12296925e21", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-w" "/opt/rustwide/workdir" "--user" "0:0" "c6b724276d670683220aa11c7d6f8558cee001b70e7f4a2dd868a12296925e21" "/opt/rustwide/cargo-home/bin/cargo" "+1.99.0-beta.8" "build" "--frozen" "--message-format=json" "--release", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.106
[INFO] [stderr]    Compiling unicode-ident v1.0.24
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[INFO] [stderr]    Compiling find-msvc-tools v0.1.9
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[INFO] [stderr]    Compiling serde_core v1.0.228
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[INFO] [stderr]    Compiling serde v1.0.228
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[INFO] [stderr]    Compiling anstyle-query v1.1.5
[INFO] [stderr]    Compiling scopeguard v1.2.0
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[INFO] [stderr]    Compiling aho-corasick v1.1.4
[INFO] [stderr]    Compiling num-traits v0.2.19
[INFO] [stderr]    Compiling syn v2.0.117
[INFO] [stderr]    Compiling lock_api v0.4.14
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[INFO] [stderr]    Compiling parking_lot_core v0.9.12
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[INFO] [stderr]    Compiling futures-core v0.3.32
[INFO] [stderr]    Compiling ryu v1.0.23
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[INFO] [stderr]    Compiling heck v0.5.0
[INFO] [stderr]    Compiling unicase v2.9.0
[INFO] [stderr]    Compiling clap_lex v1.1.0
[INFO] [stderr]    Compiling env_filter v1.0.0
[INFO] [stderr]    Compiling flume v0.10.14
[INFO] [stderr]    Compiling clap_derive v4.6.0
[INFO] [stderr]    Compiling clap_builder v4.6.0
[INFO] [stderr]    Compiling bgzf v0.2.0
[INFO] [stderr]    Compiling k2tools v0.2.0 (/opt/rustwide/workdir)
[INFO] [stderr]    Compiling anstream v0.6.21
[INFO] [stderr]    Compiling parking_lot v0.12.5
[INFO] [stderr]    Compiling buffer-redux v1.0.2
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[INFO] [stderr]    Compiling serde-value v0.7.0
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[INFO] [stderr]    Compiling seq_io v0.3.4
[INFO] [stderr]    Compiling rpmalloc v0.2.2
[INFO] [stderr]    Compiling serde-aux v4.7.0
[INFO] [stderr]    Compiling flate2 v1.1.9
[INFO] [stderr]    Compiling clap v4.6.0
[INFO] [stderr]    Compiling fgoxide v0.7.0
[INFO] [stderr]    Compiling env_logger v0.11.9
[INFO] [stderr]     Finished `release` profile [optimized] target(s) in 1m 54s
[INFO] running `Command { std: "docker" "inspect" "c6b724276d670683220aa11c7d6f8558cee001b70e7f4a2dd868a12296925e21", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-w" "/opt/rustwide/workdir" "--user" "0:0" "c6b724276d670683220aa11c7d6f8558cee001b70e7f4a2dd868a12296925e21" "/opt/rustwide/cargo-home/bin/cargo" "+1.99.0-beta.8" "test" "--frozen" "--no-run" "--message-format=json" "--release", kill_on_drop: false }`
[INFO] [stderr]    Compiling memchr v2.8.0
[INFO] [stderr]    Compiling rustix v1.1.4
[INFO] [stderr]    Compiling cfg-if v1.0.4
[INFO] [stderr]    Compiling libc v0.2.183
[INFO] [stderr]    Compiling serde_core v1.0.228
[INFO] [stderr]    Compiling utf8parse v0.2.2
[INFO] [stderr]    Compiling num-traits v0.2.19
[INFO] [stderr]    Compiling linux-raw-sys v0.12.1
[INFO] [stderr]    Compiling anstyle-query v1.1.5
[INFO] [stderr]    Compiling anstyle v1.0.13
[INFO] [stderr]    Compiling bitflags v2.11.0
[INFO] [stderr]    Compiling scopeguard v1.2.0
[INFO] [stderr]    Compiling is_terminal_polyfill v1.70.2
[INFO] [stderr]    Compiling colorchoice v1.0.4
[INFO] [stderr]    Compiling lock_api v0.4.14
[INFO] [stderr]    Compiling regex-syntax v0.8.10
[INFO] [stderr]    Compiling anstyle-parse v1.0.0
[INFO] [stderr]    Compiling zmij v1.0.21
[INFO] [stderr]    Compiling libdeflate-sys v0.7.5
[INFO] [stderr]    Compiling regex-automata v0.1.10
[INFO] [stderr]    Compiling aho-corasick v1.1.4
[INFO] [stderr]    Compiling ordered-float v2.10.1
[INFO] [stderr]    Compiling itoa v1.0.17
[INFO] [stderr]    Compiling getrandom v0.2.17
[INFO] [stderr]    Compiling smallvec v1.15.1
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[INFO] [stderr]    Compiling adler2 v2.0.1
[INFO] [stderr]    Compiling chrono v0.4.44
[INFO] [stderr]    Compiling parking_lot_core v0.9.12
[INFO] [stderr]    Compiling miniz_oxide v0.8.9
[INFO] [stderr]    Compiling nanorand v0.7.0
[INFO] [stderr]    Compiling csv-core v0.1.13
[INFO] [stderr]    Compiling libdeflater v0.7.5
[INFO] [stderr]    Compiling spin v0.9.8
[INFO] [stderr]    Compiling anstream v1.0.0
[INFO] [stderr]    Compiling anstyle-parse v0.2.7
[INFO] [stderr]    Compiling crc32fast v1.5.0
[INFO] [stderr]    Compiling regex-automata v0.4.14
[INFO] [stderr]    Compiling thiserror v1.0.69
[INFO] [stderr]    Compiling pin-project v1.1.11
[INFO] [stderr]    Compiling byteorder v1.5.0
[INFO] [stderr]    Compiling strsim v0.11.1
[INFO] [stderr]    Compiling futures-sink v0.3.32
[INFO] [stderr]    Compiling zlib-rs v0.6.3
[INFO] [stderr]    Compiling ryu v1.0.23
[INFO] [stderr]    Compiling unicode-width v0.2.2
[INFO] [stderr]    Compiling serde v1.0.228
[INFO] [stderr]    Compiling terminal_size v0.4.3
[INFO] [stderr]    Compiling serde_json v1.0.149
[INFO] [stderr]    Compiling serde-value v0.7.0
[INFO] [stderr]    Compiling bstr v0.2.17
[INFO] [stderr]    Compiling clap_lex v1.1.0
[INFO] [stderr]    Compiling bytes v1.11.1
[INFO] [stderr]    Compiling futures-core v0.3.32
[INFO] [stderr]    Compiling getrandom v0.4.2
[INFO] [stderr]    Compiling log v0.4.29
[INFO] [stderr]    Compiling itoa v0.4.8
[INFO] [stderr]    Compiling unicase v2.9.0
[INFO] [stderr]    Compiling csv v1.1.6
[INFO] [stderr]    Compiling clap_builder v4.6.0
[INFO] [stderr]    Compiling serde-aux v4.7.0
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[INFO] [stderr]    Compiling flume v0.10.14
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[INFO] [stderr]    Compiling parking_lot v0.12.5
[INFO] [stderr]    Compiling rpmalloc-sys v0.2.3+b097fd0
[INFO] [stderr]    Compiling regex v1.12.3
[INFO] [stderr]    Compiling buffer-redux v1.0.2
[INFO] [stderr]    Compiling flate2 v1.1.9
[INFO] [stderr]    Compiling thiserror v2.0.21
[INFO] [stderr]    Compiling env_filter v1.0.0
[INFO] [stderr]    Compiling crossbeam-utils v0.8.21
[INFO] [stderr]    Compiling scoped_threadpool v0.1.9
[INFO] [stderr]    Compiling jiff v0.2.23
[INFO] [stderr]    Compiling fgoxide v0.7.0
[INFO] [stderr]    Compiling pooled-writer v0.3.0
[INFO] [stderr]    Compiling seq_io v0.3.4
[INFO] [stderr]    Compiling rpmalloc v0.2.2
[INFO] [stderr]    Compiling anyhow v1.0.102
[INFO] [stderr]    Compiling once_cell v1.21.4
[INFO] [stderr]    Compiling fastrand v2.3.0
[INFO] [stderr]    Compiling tempfile v3.27.0
[INFO] [stderr]    Compiling clap v4.6.0
[INFO] [stderr]    Compiling k2tools v0.2.0 (/opt/rustwide/workdir)
[INFO] [stderr]    Compiling env_logger v0.11.9
[INFO] [stderr]     Finished `release` profile [optimized] target(s) in 1m 50s
[INFO] running `Command { std: "docker" "inspect" "c6b724276d670683220aa11c7d6f8558cee001b70e7f4a2dd868a12296925e21", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-w" "/opt/rustwide/workdir" "--user" "0:0" "c6b724276d670683220aa11c7d6f8558cee001b70e7f4a2dd868a12296925e21" "/opt/rustwide/cargo-home/bin/cargo" "+1.99.0-beta.8" "test" "--frozen" "--release", kill_on_drop: false }`
[INFO] [stderr]     Finished `release` profile [optimized] target(s) in 0.16s
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/release/deps/k2tools_lib-166b4a6a30a1408a)
[INFO] [stdout] 
[INFO] [stdout] running 96 tests
[INFO] [stdout] test commands::filter::tests::test_build_taxon_set_unknown_taxon ... ok
[INFO] [stdout] test commands::filter::tests::test_build_taxon_set_with_descendants ... ok
[INFO] [stdout] test commands::filter::tests::test_build_taxon_set_exact ... ok
[INFO] [stdout] test commands::filter::tests::test_build_taxon_set_include_unclassified ... ok
[INFO] [stdout] test commands::filter::tests::test_build_taxon_set_only_unclassified ... ok
[INFO] [stdout] test commands::filter::tests::test_exclude_of_other_taxon_leaves_unclassified_in_set ... ok
[INFO] [stdout] test commands::filter::tests::test_exclude_of_taxon_not_in_set_is_noop ... ok
[INFO] [stdout] test commands::filter::tests::test_exclude_with_descendants_removes_whole_clade ... ok
[INFO] [stdout] test commands::filter::tests::test_expected_count_with_descendants ... ok
[INFO] [stdout] test commands::filter::tests::test_expected_count_with_unclassified ... ok
[INFO] [stdout] test commands::filter::tests::test_build_taxon_set_with_descendants_root ... ok
[INFO] [stdout] test commands::filter::tests::test_exclusion_of_all_selected_taxa_errors ... ok
[INFO] [stdout] test commands::filter::tests::test_expected_count_does_not_double_count_overlapping_clades ... ok
[INFO] [stdout] test commands::filter::tests::test_exclude_of_taxon_zero_removes_unclassified ... ok
[INFO] [stdout] test commands::filter::tests::test_exclude_removes_taxon_and_its_expected_count ... ok
[INFO] [stdout] test commands::filter::tests::test_exclude_taxon_missing_from_report_is_ignored ... ok
[INFO] [stdout] test commands::filter::tests::test_expected_count_without_descendants ... ok
[INFO] [stdout] test commands::filter::tests::test_is_broken_pipe_detects_broken_pipe_io_error ... ok
[INFO] [stdout] test commands::filter::tests::test_is_broken_pipe_detects_broken_pipe_under_context ... ok
[INFO] [stdout] test commands::filter::tests::test_is_broken_pipe_ignores_non_io_errors ... ok
[INFO] [stdout] test commands::filter::tests::test_validate_args_allows_single_output_for_paired_input ... ok
[INFO] [stdout] test commands::filter::tests::test_is_broken_pipe_ignores_other_io_errors ... ok
[INFO] [stdout] test commands::filter::tests::test_validate_args_exclude_requires_taxon_ids ... ok
[INFO] [stdout] test commands::filter::tests::test_validate_read_name_match ... ok
[INFO] [stdout] test commands::filter::tests::test_validate_args_no_taxa_or_unclassified ... ok
[INFO] [stdout] test commands::filter::tests::test_validate_args_rejects_stdout_for_both_outputs ... ok
[INFO] [stdout] test commands::filter::tests::test_validate_args_rejects_two_outputs_for_single_input ... ok
[INFO] [stdout] test commands::filter::tests::test_validate_read_name_mismatch ... ok
[INFO] [stdout] test commands::filter::tests::test_validate_read_name_strip_suffix_1 ... ok
[INFO] [stdout] test commands::filter::tests::test_validate_read_name_strip_suffix_2 ... ok
[INFO] [stdout] test commands::filter::tests::test_validate_read_name_suffix_and_comment ... ok
[INFO] [stdout] test commands::report_to_tsv::tests::test_fractions_zero_when_no_sequences ... ok
[INFO] [stdout] test commands::report_to_tsv::tests::test_level_values ... ok
[INFO] [stdout] test commands::report_to_tsv::tests::test_minimizer_columns_empty_for_standard_report ... ok
[INFO] [stdout] test commands::report_to_tsv::tests::test_minimizer_columns_populated_for_extended_report ... ok
[INFO] [stdout] test commands::report_to_tsv::tests::test_fraction_calculations ... ok
[INFO] [stdout] test commands::report_to_tsv::tests::test_parent_fields_empty_for_root_and_unclassified ... ok
[INFO] [stdout] test commands::report_to_tsv::tests::test_parent_fields_populated_for_children ... ok
[INFO] [stdout] test kraken_output::tests::test_empty_read_name ... ok
[INFO] [stdout] test kraken_output::tests::test_invalid_status ... ok
[INFO] [stdout] test kraken_output::tests::test_parse_classified_line ... ok
[INFO] [stdout] test commands::filter::tests::test_validate_read_name_with_comment ... ok
[INFO] [stdout] test kraken_output::tests::test_missing_fields ... ok
[INFO] [stdout] test commands::report_to_tsv::tests::test_basic_field_values ... ok
[INFO] [stdout] test commands::report_to_tsv::tests::test_descendant_count ... ok
[INFO] [stdout] test commands::report_to_tsv::tests::test_empty_report_produces_no_rows ... ok
[INFO] [stdout] test commands::report_to_tsv::tests::test_write_tsv_header_and_rows ... ok
[INFO] [stdout] test kraken_output::tests::test_invalid_taxon_id ... ok
[INFO] [stdout] test progress::tests::test_format_count_millions ... ok
[INFO] [stdout] test kraken_output::tests::test_parse_unclassified_line ... ok
[INFO] [stdout] test kraken_output::tests::test_reader_empty_input ... ok
[INFO] [stdout] test kraken_output::tests::test_reader_multiple_records ... ok
[INFO] [stdout] test progress::tests::test_format_count_small ... ok
[INFO] [stdout] test progress::tests::test_format_count_thousands ... ok
[INFO] [stdout] test progress::tests::test_format_elapsed_exact_minute ... ok
[INFO] [stdout] test progress::tests::test_format_elapsed_minutes_and_seconds ... ok
[INFO] [stdout] test progress::tests::test_format_elapsed_seconds_only ... ok
[INFO] [stdout] test progress::tests::test_record_n_crosses_milestones ... ok
[INFO] [stdout] test report::kraken_report::tests::test_blank_lines_are_skipped ... ok
[INFO] [stdout] test report::kraken_report::tests::test_children_multiple ... ok
[INFO] [stdout] test report::kraken_report::tests::test_depth_derivation ... ok
[INFO] [stdout] test report::kraken_report::tests::test_descendants_mid_level ... ok
[INFO] [stdout] test report::kraken_report::tests::test_descendants_of_leaf ... ok
[INFO] [stdout] test report::kraken_report::tests::test_descendants_of_root ... ok
[INFO] [stdout] test progress::tests::test_record_n_zero_is_noop ... ok
[INFO] [stdout] test progress::tests::test_record_no_panic ... ok
[INFO] [stdout] test report::kraken_report::tests::test_error_unsupported_column_count ... ok
[INFO] [stdout] test report::kraken_report::tests::test_names_are_trimmed ... ok
[INFO] [stdout] test report::kraken_report::tests::test_empty_input_returns_empty_report ... ok
[INFO] [stdout] test report::kraken_report::tests::test_error_duplicate_taxon_ids ... ok
[INFO] [stdout] test report::kraken_report::tests::test_error_inconsistent_columns ... ok
[INFO] [stdout] test report::kraken_report::tests::test_is_empty ... ok
[INFO] [stdout] test report::kraken_report::tests::test_index_of_taxon_id ... ok
[INFO] [stdout] test report::kraken_report::tests::test_parse_extended_report ... ok
[INFO] [stdout] test report::kraken_report::tests::test_non_standard_ranks_in_tree ... ok
[INFO] [stdout] test report::kraken_report::tests::test_parent_child_multi_level ... ok
[INFO] [stdout] test report::kraken_report::tests::test_only_blank_lines_returns_empty_report ... ok
[INFO] [stdout] test report::kraken_report::tests::test_error_non_numeric_field ... ok
[INFO] [stdout] test report::kraken_report::tests::test_percentage_parsing ... ok
[INFO] [stdout] test report::kraken_report::tests::test_parse_minimal_standard_report ... ok
[INFO] [stdout] test report::kraken_report::tests::test_taxon_id_lookup_hit ... ok
[INFO] [stdout] test report::kraken_report::tests::test_taxon_id_lookup_miss ... ok
[INFO] [stdout] test report::kraken_report::tests::test_total_sequences ... ok
[INFO] [stdout] test report::kraken_report::tests::test_total_sequences_no_unclassified ... ok
[INFO] [stdout] test report::rank::tests::test_rank_invalid ... ok
[INFO] [stdout] test report::kraken_report::tests::test_error_odd_leading_spaces ... ok
[INFO] [stdout] test report::rank::tests::test_rank_round_trip_all_standard ... ok
[INFO] [stdout] test report::rank::tests::test_taxonomic_rank_display_non_standard ... ok
[INFO] [stdout] test report::rank::tests::test_taxonomic_rank_domain_depth ... ok
[INFO] [stdout] test report::rank::tests::test_taxonomic_rank_empty ... ok
[INFO] [stdout] test report::rank::tests::test_taxonomic_rank_invalid_code ... ok
[INFO] [stdout] test report::rank::tests::test_taxonomic_rank_non_numeric_suffix ... ok
[INFO] [stdout] test report::rank::tests::test_taxonomic_rank_non_standard_parse ... ok
[INFO] [stdout] test report::kraken_report::tests::test_standard_report_no_minimizers ... ok
[INFO] [stdout] test report::rank::tests::test_taxonomic_rank_zero_depth ... ok
[INFO] [stdout] test report::rank::tests::test_taxonomic_rank_standard_round_trip ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 96 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.02s
[INFO] [stdout] 
[INFO] [stderr]      Running unittests src/main.rs (/opt/rustwide/target/release/deps/k2tools-24485cac1a7d1e99)
[INFO] [stdout] 
[INFO] [stderr]      Running tests/test_filter.rs (/opt/rustwide/target/release/deps/test_filter-39bc38f099db6666)
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] running 32 tests
[INFO] [stdout] test test_empty_inputs_to_stdout_writes_nothing ... ok
[INFO] [stdout] test test_exclude_taxon_missing_from_report_is_ignored ... ok
[INFO] [stdout] test test_empty_report_nonempty_fastq ... ok
[INFO] [stdout] test test_all_match ... ok
[INFO] [stdout] test test_exclude_with_descendants_drops_whole_clade ... ok
[INFO] [stdout] test test_exclude_without_taxon_ids_errors ... ok
[INFO] [stdout] test test_excluding_every_selected_taxon_errors ... ok
[INFO] [stdout] test test_empty_inputs_single_end ... ok
[INFO] [stdout] test test_fastq_longer_than_kraken ... ok
[INFO] [stdout] test test_empty_inputs_paired_end ... ok
[INFO] [stdout] test test_bgz_extension_writes_bgzf_output ... ok
[INFO] [stdout] test test_exclude_taxon_drops_its_reads ... ok
[INFO] [stdout] test test_mismatched_input_output_count ... ok
[INFO] [stdout] test test_include_unclassified_only ... ok
[INFO] [stdout] test test_multiple_taxon_ids ... ok
[INFO] [stdout] test test_no_matches ... ok
[INFO] [stdout] test test_fastq_names_with_suffixes ... ok
[INFO] [stdout] test test_non_gz_extension_writes_uncompressed_output ... ok
[INFO] [stdout] test test_nonempty_report_missing_kraken_output ... ok
[INFO] [stdout] test test_gzip_compressed_input ... ok
[INFO] [stdout] test test_kraken_longer_than_fastq ... ok
[INFO] [stdout] test test_paired_end_single_output_interleaves_to_stdout ... ok
[INFO] [stdout] test test_mismatched_read_names ... ok
[INFO] [stdout] test test_stdout_for_both_outputs_errors ... ok
[INFO] [stdout] test test_paired_end ... ok
[INFO] [stdout] test test_single_end_output_to_stdout ... ok
[INFO] [stdout] test test_with_descendants ... ok
[INFO] [stdout] test test_paired_end_single_output_interleaves_to_bgzf_file ... ok
[INFO] [stdout] test test_paired_end_mixed_uncompressed_and_bgzf_outputs ... ok
[INFO] [stdout] test test_single_end_exact_taxon ... ok
[INFO] [stdout] test test_taxon_ids_plus_unclassified ... ok
[INFO] [stdout] test test_stdout_closed_early_by_reader_exits_successfully ... ok
[INFO] [stderr]      Running tests/test_report_to_tsv.rs (/opt/rustwide/target/release/deps/test_report_to_tsv-501001657a9712b7)
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 32 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.68s
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] running 4 tests
[INFO] [stdout] test test_output_to_file ... ok
[INFO] [stdout] test test_standard_report_to_tsv ... ok
[INFO] [stderr]    Doc-tests k2tools_lib
[INFO] [stdout] test test_extended_report_with_minimizers ... ok
[INFO] [stdout] test test_empty_report_produces_header_only ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 4 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "c6b724276d670683220aa11c7d6f8558cee001b70e7f4a2dd868a12296925e21", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "c6b724276d670683220aa11c7d6f8558cee001b70e7f4a2dd868a12296925e21", kill_on_drop: false }`
[INFO] [stdout] c6b724276d670683220aa11c7d6f8558cee001b70e7f4a2dd868a12296925e21